Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1132
Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Tetracycline 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,388,069 | - | DvMF_1131 | 0.37 | -0.2 | |
1,388,320 | + | DvMF_1131 | 0.54 | +0.0 | |
1,388,692 | - | DvMF_1131 | 0.79 | -0.1 | |
1,388,825 | - | DvMF_1131 | 0.88 | +0.7 | |
1,388,960 | - | +0.2 | |||
1,389,004 | + | +1.4 | |||
1,389,136 | - | -0.6 | |||
1,389,175 | + | DvMF_1132 | 0.13 | -0.3 | |
1,389,464 | + | DvMF_1132 | 0.33 | +1.0 | |
1,389,464 | + | DvMF_1132 | 0.33 | -0.5 | |
1,389,517 | + | DvMF_1132 | 0.37 | +0.2 | |
1,389,551 | + | DvMF_1132 | 0.40 | +1.0 | |
1,389,886 | + | DvMF_1132 | 0.64 | -0.7 | |
1,390,248 | - | DvMF_1132 | 0.90 | -0.6 | |
1,390,558 | - | -0.2 | |||
1,390,624 | - | DvMF_1133 | 0.18 | -0.4 | |
1,390,695 | - | DvMF_1133 | 0.29 | -0.2 | |
1,390,746 | + | DvMF_1133 | 0.36 | -0.1 | |
1,391,254 | + | -2.0 | |||
1,391,262 | - | -0.2 | |||
1,391,327 | - | -0.6 | |||
1,391,391 | + | -1.3 |
Or see this region's nucleotide sequence