Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1062 and DvMF_1063 are separated by 90 nucleotides DvMF_1063 and DvMF_1064 are separated by 1 nucleotides DvMF_1064 and DvMF_1065 are separated by 164 nucleotides
DvMF_1062: DvMF_1062 - Tail Collar domain protein (RefSeq), at 1,302,815 to 1,304,407
_1062
DvMF_1063: DvMF_1063 - hypothetical protein (RefSeq), at 1,304,498 to 1,305,007
_1063
DvMF_1064: DvMF_1064 - hypothetical protein (RefSeq), at 1,305,009 to 1,305,587
_1064
DvMF_1065: DvMF_1065 - hypothetical protein (RefSeq), at 1,305,752 to 1,307,830
_1065
Position (kb)
1304
1305
1306 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1303.630 kb on + strand, within DvMF_1062 at 1303.759 kb on - strand, within DvMF_1062 at 1303.818 kb on + strand, within DvMF_1062 at 1303.818 kb on + strand, within DvMF_1062 at 1303.861 kb on - strand, within DvMF_1062 at 1303.861 kb on - strand, within DvMF_1062 at 1304.118 kb on + strand, within DvMF_1062 at 1304.126 kb on - strand, within DvMF_1062 at 1304.148 kb on + strand, within DvMF_1062 at 1304.267 kb on + strand at 1304.275 kb on - strand at 1304.370 kb on + strand at 1304.480 kb on + strand at 1304.493 kb on - strand at 1304.522 kb on + strand at 1304.558 kb on + strand, within DvMF_1063 at 1304.583 kb on - strand, within DvMF_1063 at 1304.618 kb on - strand, within DvMF_1063 at 1304.840 kb on - strand, within DvMF_1063 at 1304.950 kb on + strand, within DvMF_1063 at 1305.084 kb on - strand, within DvMF_1064 at 1305.350 kb on - strand, within DvMF_1064 at 1305.434 kb on + strand, within DvMF_1064 at 1305.485 kb on - strand, within DvMF_1064 at 1305.717 kb on - strand at 1305.838 kb on + strand at 1305.893 kb on + strand at 1305.918 kb on + strand at 1305.931 kb on - strand at 1305.968 kb on - strand, within DvMF_1065
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml remove 1,303,630 + DvMF_1062 0.51 -1.2 1,303,759 - DvMF_1062 0.59 -0.9 1,303,818 + DvMF_1062 0.63 -0.9 1,303,818 + DvMF_1062 0.63 -0.2 1,303,861 - DvMF_1062 0.66 +0.4 1,303,861 - DvMF_1062 0.66 -1.4 1,304,118 + DvMF_1062 0.82 -0.6 1,304,126 - DvMF_1062 0.82 -0.4 1,304,148 + DvMF_1062 0.84 -2.3 1,304,267 + -0.4 1,304,275 - -0.4 1,304,370 + +0.1 1,304,480 + -0.9 1,304,493 - -0.6 1,304,522 + -0.2 1,304,558 + DvMF_1063 0.12 +0.3 1,304,583 - DvMF_1063 0.17 -0.9 1,304,618 - DvMF_1063 0.24 -0.5 1,304,840 - DvMF_1063 0.67 -0.1 1,304,950 + DvMF_1063 0.89 -1.0 1,305,084 - DvMF_1064 0.13 -3.1 1,305,350 - DvMF_1064 0.59 +0.6 1,305,434 + DvMF_1064 0.73 -1.3 1,305,485 - DvMF_1064 0.82 -4.1 1,305,717 - +0.4 1,305,838 + -0.5 1,305,893 + -1.1 1,305,918 + -0.6 1,305,931 - -0.2 1,305,968 - DvMF_1065 0.10 -0.6
Or see this region's nucleotide sequence