Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0999
Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Tetracycline 0.0005 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,213,099 | + | DvMF_0998 | 0.46 | +0.0 | |
| 1,213,387 | - | DvMF_0998 | 0.78 | +1.7 | |
| 1,213,444 | - | DvMF_0998 | 0.85 | -0.1 | |
| 1,213,453 | + | DvMF_0998 | 0.86 | +0.4 | |
| 1,213,454 | + | DvMF_0998 | 0.86 | +0.7 | |
| 1,213,462 | - | DvMF_0998 | 0.87 | -0.1 | |
| 1,213,745 | + | DvMF_0999 | 0.12 | -0.2 | |
| 1,214,035 | - | DvMF_0999 | 0.33 | -0.2 | |
| 1,214,168 | + | DvMF_0999 | 0.42 | +0.6 | |
| 1,214,355 | - | DvMF_0999 | 0.55 | +0.2 | |
| 1,214,398 | - | DvMF_0999 | 0.58 | -0.4 | |
| 1,214,436 | - | DvMF_0999 | 0.61 | -0.2 | |
| 1,214,481 | - | DvMF_0999 | 0.64 | -0.0 | |
| 1,214,638 | + | DvMF_0999 | 0.75 | -0.5 | |
| 1,214,646 | - | DvMF_0999 | 0.76 | -1.4 | |
| 1,215,589 | + | DvMF_1000 | 0.37 | -1.6 | |
| 1,215,897 | - | DvMF_1000 | 0.68 | -1.7 | |
| 1,215,957 | + | DvMF_1000 | 0.74 | -1.3 | |
| 1,215,965 | - | DvMF_1000 | 0.75 | -0.5 | |
| 1,215,965 | - | DvMF_1000 | 0.75 | -2.2 |
Or see this region's nucleotide sequence