Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0656 and DvMF_0657 are separated by 239 nucleotides DvMF_0657 and DvMF_0658 overlap by 4 nucleotides DvMF_0658 and DvMF_0659 are separated by 72 nucleotides
DvMF_0656: DvMF_0656 - extracellular solute-binding protein family 1 (RefSeq), at 790,871 to 792,166
_0656
DvMF_0657: DvMF_0657 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 792,406 to 793,299
_0657
DvMF_0658: DvMF_0658 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 793,296 to 794,129
_0658
DvMF_0659: DvMF_0659 - hypothetical protein (RefSeq), at 794,202 to 795,071
_0659
Position (kb) 792
793
794 Strain fitness (log2 ratio) -2
-1
0
1 at 791.456 kb on + strand, within DvMF_0656 at 791.510 kb on + strand, within DvMF_0656 at 791.574 kb on - strand, within DvMF_0656 at 791.621 kb on + strand, within DvMF_0656 at 791.844 kb on - strand, within DvMF_0656 at 792.038 kb on + strand at 792.052 kb on - strand at 792.409 kb on + strand at 792.610 kb on + strand, within DvMF_0657 at 792.658 kb on + strand, within DvMF_0657 at 792.686 kb on - strand, within DvMF_0657 at 792.910 kb on - strand, within DvMF_0657 at 793.083 kb on + strand, within DvMF_0657 at 793.181 kb on + strand, within DvMF_0657 at 793.226 kb on - strand at 793.391 kb on + strand, within DvMF_0658 at 793.470 kb on - strand, within DvMF_0658 at 793.991 kb on + strand, within DvMF_0658
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml remove 791,456 + DvMF_0656 0.45 -0.8 791,510 + DvMF_0656 0.49 +1.2 791,574 - DvMF_0656 0.54 -0.5 791,621 + DvMF_0656 0.58 -1.0 791,844 - DvMF_0656 0.75 -1.4 792,038 + -0.6 792,052 - +1.2 792,409 + -0.4 792,610 + DvMF_0657 0.23 -2.0 792,658 + DvMF_0657 0.28 -1.0 792,686 - DvMF_0657 0.31 -0.5 792,910 - DvMF_0657 0.56 -0.7 793,083 + DvMF_0657 0.76 -1.8 793,181 + DvMF_0657 0.87 -0.6 793,226 - -0.9 793,391 + DvMF_0658 0.11 -0.6 793,470 - DvMF_0658 0.21 -1.3 793,991 + DvMF_0658 0.83 -0.4
Or see this region's nucleotide sequence