Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0652
Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Tetracycline 0.0005 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 783,731 | - | DvMF_0651 | 0.34 | -0.2 | |
| 783,951 | - | DvMF_0651 | 0.51 | +1.0 | |
| 783,956 | - | DvMF_0651 | 0.51 | -1.0 | |
| 784,324 | - | DvMF_0651 | 0.80 | -0.6 | |
| 784,369 | + | DvMF_0651 | 0.84 | -0.5 | |
| 784,375 | + | DvMF_0651 | 0.84 | -0.5 | |
| 784,383 | - | DvMF_0651 | 0.85 | -0.8 | |
| 784,472 | - | -1.0 | |||
| 784,893 | - | DvMF_0652 | 0.15 | -0.7 | |
| 785,198 | - | DvMF_0652 | 0.42 | -0.6 | |
| 785,371 | + | DvMF_0652 | 0.58 | -1.1 | |
| 785,536 | + | DvMF_0652 | 0.72 | -1.3 | |
| 785,564 | + | DvMF_0652 | 0.75 | -1.6 | |
| 785,569 | + | DvMF_0652 | 0.75 | -5.2 | |
| 785,845 | + | -1.6 | |||
| 785,892 | - | -0.5 | |||
| 785,907 | + | -2.1 | |||
| 786,044 | + | -0.8 | |||
| 786,162 | + | -1.0 | |||
| 786,218 | - | -4.0 | |||
| 786,410 | - | -1.2 |
Or see this region's nucleotide sequence