Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0036 and DvMF_0037 are separated by 2 nucleotides DvMF_0037 and DvMF_0038 are separated by 126 nucleotides
DvMF_0036: DvMF_0036 - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq), at 46,313 to 49,459
_0036
DvMF_0037: DvMF_0037 - hypothetical protein (RefSeq), at 49,462 to 50,142
_0037
DvMF_0038: DvMF_0038 - protein of unknown function DUF140 (RefSeq), at 50,269 to 51,414
_0038
Position (kb)
49
50
51 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 48.462 kb on - strand, within DvMF_0036 at 48.496 kb on - strand, within DvMF_0036 at 48.496 kb on - strand, within DvMF_0036 at 48.513 kb on - strand, within DvMF_0036 at 48.529 kb on - strand, within DvMF_0036 at 48.529 kb on - strand, within DvMF_0036 at 48.546 kb on - strand, within DvMF_0036 at 48.546 kb on - strand, within DvMF_0036 at 48.937 kb on - strand, within DvMF_0036 at 49.459 kb on + strand at 49.531 kb on + strand, within DvMF_0037 at 49.600 kb on + strand, within DvMF_0037 at 49.644 kb on + strand, within DvMF_0037 at 49.660 kb on + strand, within DvMF_0037 at 49.709 kb on - strand, within DvMF_0037 at 49.822 kb on - strand, within DvMF_0037 at 49.836 kb on + strand, within DvMF_0037 at 49.860 kb on + strand, within DvMF_0037 at 49.946 kb on - strand, within DvMF_0037 at 50.114 kb on + strand at 50.548 kb on + strand, within DvMF_0038 at 50.574 kb on - strand, within DvMF_0038 at 50.579 kb on - strand, within DvMF_0038 at 50.650 kb on + strand, within DvMF_0038 at 50.661 kb on + strand, within DvMF_0038 at 50.669 kb on - strand, within DvMF_0038 at 50.680 kb on + strand, within DvMF_0038 at 50.683 kb on - strand, within DvMF_0038 at 50.688 kb on - strand, within DvMF_0038 at 50.758 kb on + strand, within DvMF_0038 at 50.766 kb on + strand, within DvMF_0038 at 50.794 kb on - strand, within DvMF_0038 at 50.833 kb on + strand, within DvMF_0038 at 50.836 kb on - strand, within DvMF_0038 at 50.862 kb on - strand, within DvMF_0038 at 50.862 kb on - strand, within DvMF_0038 at 50.880 kb on + strand, within DvMF_0038 at 50.995 kb on + strand, within DvMF_0038 at 51.037 kb on - strand, within DvMF_0038 at 51.117 kb on + strand, within DvMF_0038 at 51.118 kb on - strand, within DvMF_0038
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml remove 48,462 - DvMF_0036 0.68 +0.0 48,496 - DvMF_0036 0.69 -0.4 48,496 - DvMF_0036 0.69 -0.7 48,513 - DvMF_0036 0.70 -0.6 48,529 - DvMF_0036 0.70 -1.7 48,529 - DvMF_0036 0.70 -0.5 48,546 - DvMF_0036 0.71 -0.9 48,546 - DvMF_0036 0.71 -0.7 48,937 - DvMF_0036 0.83 -0.3 49,459 + -1.2 49,531 + DvMF_0037 0.10 -2.1 49,600 + DvMF_0037 0.20 -0.8 49,644 + DvMF_0037 0.27 -0.7 49,660 + DvMF_0037 0.29 -0.6 49,709 - DvMF_0037 0.36 -1.8 49,822 - DvMF_0037 0.53 -0.8 49,836 + DvMF_0037 0.55 -1.3 49,860 + DvMF_0037 0.58 -0.6 49,946 - DvMF_0037 0.71 -0.0 50,114 + -0.8 50,548 + DvMF_0038 0.24 -2.9 50,574 - DvMF_0038 0.27 -0.3 50,579 - DvMF_0038 0.27 +0.4 50,650 + DvMF_0038 0.33 -0.6 50,661 + DvMF_0038 0.34 -0.8 50,669 - DvMF_0038 0.35 -0.6 50,680 + DvMF_0038 0.36 -1.4 50,683 - DvMF_0038 0.36 -0.4 50,688 - DvMF_0038 0.37 -0.6 50,758 + DvMF_0038 0.43 -0.5 50,766 + DvMF_0038 0.43 -0.4 50,794 - DvMF_0038 0.46 -0.6 50,833 + DvMF_0038 0.49 -0.8 50,836 - DvMF_0038 0.49 -1.1 50,862 - DvMF_0038 0.52 -1.7 50,862 - DvMF_0038 0.52 -0.8 50,880 + DvMF_0038 0.53 -0.4 50,995 + DvMF_0038 0.63 +0.1 51,037 - DvMF_0038 0.67 -0.2 51,117 + DvMF_0038 0.74 -0.7 51,118 - DvMF_0038 0.74 +0.3
Or see this region's nucleotide sequence