Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23545 and AZOBR_RS23550 overlap by 1 nucleotides AZOBR_RS23550 and AZOBR_RS23555 are separated by 168 nucleotides AZOBR_RS23555 and AZOBR_RS23560 are separated by 107 nucleotides AZOBR_RS23560 and AZOBR_RS23565 overlap by 4 nucleotides
AZOBR_RS23545: AZOBR_RS23545 - tetrathionate reductase, at 313,051 to 314,184
_RS23545
AZOBR_RS23550: AZOBR_RS23550 - tetrathionate reductase subunit B, at 314,184 to 314,936
_RS23550
AZOBR_RS23555: AZOBR_RS23555 - beta-lactamase, at 315,105 to 315,995
_RS23555
AZOBR_RS23560: AZOBR_RS23560 - LysR family transcriptional regulator, at 316,103 to 316,978
_RS23560
AZOBR_RS23565: AZOBR_RS23565 - D-threo-aldose 1-dehydrogenase, at 316,975 to 317,925
_RS23565
Position (kb) 315
316 Strain fitness (log2 ratio) -1
0
1
2 at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.115 kb on - strand at 314.507 kb on - strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.528 kb on - strand, within AZOBR_RS23550 at 314.656 kb on + strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.689 kb on + strand, within AZOBR_RS23550 at 314.986 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand at 315.193 kb on + strand at 315.193 kb on + strand at 315.193 kb on + strand at 315.194 kb on - strand, within AZOBR_RS23555 at 315.201 kb on - strand, within AZOBR_RS23555 at 315.667 kb on + strand, within AZOBR_RS23555 at 316.065 kb on + strand at 316.886 kb on + strand, within AZOBR_RS23560 at 316.976 kb on + strand at 316.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 314,114 + +0.6 314,114 + -0.3 314,114 + -0.9 314,114 + -0.4 314,115 - -1.0 314,507 - AZOBR_RS23550 0.43 -0.8 314,527 + AZOBR_RS23550 0.46 -0.4 314,527 + AZOBR_RS23550 0.46 +0.1 314,527 + AZOBR_RS23550 0.46 -0.7 314,528 - AZOBR_RS23550 0.46 -0.6 314,656 + AZOBR_RS23550 0.63 -0.9 314,657 - AZOBR_RS23550 0.63 +0.5 314,657 - AZOBR_RS23550 0.63 +0.2 314,689 + AZOBR_RS23550 0.67 -0.2 314,986 + -0.6 315,047 + +0.0 315,047 + -0.4 315,047 + -1.4 315,193 + -0.4 315,193 + +2.2 315,193 + -0.1 315,194 - AZOBR_RS23555 0.10 +0.3 315,201 - AZOBR_RS23555 0.11 -0.3 315,667 + AZOBR_RS23555 0.63 +1.4 316,065 + -0.3 316,886 + AZOBR_RS23560 0.89 -1.0 316,976 + +0.1 316,977 - +0.8
Or see this region's nucleotide sequence