Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18690 and AZOBR_RS18695 are separated by 101 nucleotides AZOBR_RS18695 and AZOBR_RS18700 are separated by 95 nucleotides AZOBR_RS18700 and AZOBR_RS18705 are separated by 50 nucleotides
AZOBR_RS18690: AZOBR_RS18690 - quinolinate synthetase, at 964,943 to 965,953
_RS18690
AZOBR_RS18695: AZOBR_RS18695 - exported protein of unknown function, at 966,055 to 966,417
_RS18695
AZOBR_RS18700: AZOBR_RS18700 - hypothetical protein, at 966,513 to 967,064
_RS18700
AZOBR_RS18705: AZOBR_RS18705 - molybdopterin-guanine dinucleotide biosynthesis protein A, at 967,115 to 967,639
_RS18705
Position (kb) 966
967 Strain fitness (log2 ratio) -2
-1
0
1
2 at 965.388 kb on + strand, within AZOBR_RS18690 at 965.389 kb on - strand, within AZOBR_RS18690 at 965.389 kb on - strand, within AZOBR_RS18690 at 965.389 kb on - strand, within AZOBR_RS18690 at 965.400 kb on + strand, within AZOBR_RS18690 at 965.517 kb on + strand, within AZOBR_RS18690 at 965.541 kb on + strand, within AZOBR_RS18690 at 965.778 kb on + strand, within AZOBR_RS18690 at 965.778 kb on + strand, within AZOBR_RS18690 at 965.778 kb on + strand, within AZOBR_RS18690 at 965.892 kb on + strand at 965.892 kb on + strand at 965.892 kb on + strand at 965.892 kb on + strand at 965.892 kb on + strand at 965.928 kb on + strand at 965.928 kb on + strand at 965.928 kb on + strand at 965.929 kb on - strand at 965.929 kb on - strand at 967.277 kb on + strand, within AZOBR_RS18705 at 967.277 kb on + strand, within AZOBR_RS18705 at 967.280 kb on + strand, within AZOBR_RS18705 at 967.280 kb on + strand, within AZOBR_RS18705 at 967.329 kb on - strand, within AZOBR_RS18705 at 967.329 kb on - strand, within AZOBR_RS18705 at 967.364 kb on + strand, within AZOBR_RS18705 at 967.364 kb on + strand, within AZOBR_RS18705 at 967.364 kb on + strand, within AZOBR_RS18705 at 967.365 kb on - strand, within AZOBR_RS18705 at 967.365 kb on - strand, within AZOBR_RS18705 at 967.365 kb on - strand, within AZOBR_RS18705 at 967.365 kb on - strand, within AZOBR_RS18705 at 967.365 kb on - strand, within AZOBR_RS18705 at 967.365 kb on - strand, within AZOBR_RS18705
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 965,388 + AZOBR_RS18690 0.44 -0.2 965,389 - AZOBR_RS18690 0.44 +0.3 965,389 - AZOBR_RS18690 0.44 +0.5 965,389 - AZOBR_RS18690 0.44 +0.6 965,400 + AZOBR_RS18690 0.45 +1.2 965,517 + AZOBR_RS18690 0.57 +1.2 965,541 + AZOBR_RS18690 0.59 +0.2 965,778 + AZOBR_RS18690 0.83 +1.1 965,778 + AZOBR_RS18690 0.83 +1.3 965,778 + AZOBR_RS18690 0.83 +0.2 965,892 + +1.9 965,892 + +1.1 965,892 + +1.5 965,892 + +0.5 965,892 + +0.4 965,928 + -0.6 965,928 + -1.2 965,928 + +1.3 965,929 - +1.1 965,929 - +1.5 967,277 + AZOBR_RS18705 0.31 -1.0 967,277 + AZOBR_RS18705 0.31 -0.3 967,280 + AZOBR_RS18705 0.31 -1.1 967,280 + AZOBR_RS18705 0.31 +0.6 967,329 - AZOBR_RS18705 0.41 -1.8 967,329 - AZOBR_RS18705 0.41 -0.9 967,364 + AZOBR_RS18705 0.47 -0.5 967,364 + AZOBR_RS18705 0.47 +0.2 967,364 + AZOBR_RS18705 0.47 +0.3 967,365 - AZOBR_RS18705 0.48 +1.3 967,365 - AZOBR_RS18705 0.48 +0.3 967,365 - AZOBR_RS18705 0.48 +0.2 967,365 - AZOBR_RS18705 0.48 +1.9 967,365 - AZOBR_RS18705 0.48 -0.8 967,365 - AZOBR_RS18705 0.48 -0.4
Or see this region's nucleotide sequence