Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21380

Experiment: m.b. perchlorate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. perchlorate 50 mM
2,213,248	+				-0.8
2,213,256	-				+0.3
2,213,265	+				-0.7
2,213,273	-				-1.3
2,213,273	-				+0.9
2,213,318	-				+0.5
2,213,318	-				+0.8
2,213,346	+				+2.2
2,213,346	+				-0.3
2,213,346	+				-0.7
2,213,354	-				-1.8
2,213,354	-				+1.7
2,213,354	-				-0.6
2,213,354	-				-0.8
2,213,354	-				+0.7
2,213,450	-				+1.7
2,213,465	+		PGA1_c21370	0.12	-0.4
2,213,465	+		PGA1_c21370	0.12	-1.1
2,213,492	+		PGA1_c21370	0.16	-0.3
2,213,510	-		PGA1_c21370	0.18	-0.3
2,213,510	-		PGA1_c21370	0.18	+0.3
2,213,565	-		PGA1_c21370	0.25	-1.0
2,213,613	+		PGA1_c21370	0.32	+1.2
2,213,667	-		PGA1_c21370	0.39	+1.7
2,213,720	-		PGA1_c21370	0.46	+0.7
2,213,735	-		PGA1_c21370	0.48	-0.3
2,213,751	-		PGA1_c21370	0.50	-0.1
2,213,772	-		PGA1_c21370	0.53	-1.4
2,213,777	-		PGA1_c21370	0.53	-0.6
2,213,777	-		PGA1_c21370	0.53	-0.5
2,213,781	+		PGA1_c21370	0.54	+0.7
2,213,781	+		PGA1_c21370	0.54	+3.9
2,213,786	+		PGA1_c21370	0.55	+1.0
2,213,789	-		PGA1_c21370	0.55	-0.0
2,213,832	-		PGA1_c21370	0.61	-0.2
2,213,858	-		PGA1_c21370	0.64	-1.3
2,213,900	-		PGA1_c21370	0.70	-1.6
2,213,906	+		PGA1_c21370	0.71	-2.4
2,213,914	-		PGA1_c21370	0.72	-0.7
2,213,930	+		PGA1_c21370	0.74	-1.2
2,213,938	-		PGA1_c21370	0.75	-1.8
2,213,938	-		PGA1_c21370	0.75	+0.5
2,213,938	-		PGA1_c21370	0.75	+0.3
2,213,959	-		PGA1_c21370	0.78	+0.2
2,213,968	+		PGA1_c21370	0.79	+1.3
2,213,970	+		PGA1_c21370	0.79	-0.6
2,213,981	-		PGA1_c21370	0.80	+1.3
2,213,999	-		PGA1_c21370	0.83	+0.6
2,214,001	+		PGA1_c21370	0.83	+2.6
2,214,001	+		PGA1_c21370	0.83	+1.0
2,214,001	+		PGA1_c21370	0.83	-1.0
2,214,001	+		PGA1_c21370	0.83	-2.3
2,214,009	-		PGA1_c21370	0.84	-0.4
2,214,009	-		PGA1_c21370	0.84	-0.1
2,214,009	-		PGA1_c21370	0.84	-1.3
2,214,077	-				-0.6
2,214,091	+				+2.0
2,214,091	+				+0.3
2,214,091	+				+1.3
2,214,116	+				+0.3
2,214,116	+				+0.3
2,214,121	+				-0.3
2,214,128	+				-0.3
2,214,128	+				-0.8
2,214,128	+				-0.7
2,214,128	+				+0.7
2,214,128	+				+0.1
2,214,128	+				+0.4
2,214,128	+				+0.1
2,214,128	+				-2.3
2,214,136	-				+0.6
2,214,136	-				-1.1
2,214,136	-				-0.3
2,214,136	-				-0.7
2,214,136	-				-2.1
2,214,136	-				-1.3
2,214,197	+				-0.3
2,214,197	+				+0.2
2,214,200	-				+0.5
2,214,200	-				+1.6
2,214,202	-				-0.4
2,214,205	-				+1.6
2,214,205	-				+1.3
2,214,215	-				-1.3
2,214,215	-				+1.2
2,214,229	-				-0.4
2,214,244	+				-0.6
2,214,268	-				+0.4
2,214,268	-				-0.5
2,214,291	-				+0.4
2,214,302	-				-0.1
2,214,322	-				-1.3
2,214,336	+				+1.1
2,214,435	-				+1.5
2,214,436	-		PGA1_c21380	0.10	-0.3
2,214,497	+		PGA1_c21380	0.13	+1.2
2,214,505	-		PGA1_c21380	0.13	+1.5
2,214,505	-		PGA1_c21380	0.13	+0.5
2,214,537	-		PGA1_c21380	0.15	-0.3
2,214,658	-		PGA1_c21380	0.21	-1.8
2,214,768	+		PGA1_c21380	0.26	+1.6
2,214,768	+		PGA1_c21380	0.26	+1.0
2,214,768	+		PGA1_c21380	0.26	-0.8
2,214,771	-		PGA1_c21380	0.26	+1.7
2,214,776	-		PGA1_c21380	0.26	+1.0
2,214,834	-		PGA1_c21380	0.29	+0.0
2,214,917	+		PGA1_c21380	0.33	+0.9
2,214,917	+		PGA1_c21380	0.33	+0.4
2,214,925	-		PGA1_c21380	0.34	+1.1
2,215,015	-		PGA1_c21380	0.38	+1.2
2,215,020	+		PGA1_c21380	0.38	+0.4
2,215,171	-		PGA1_c21380	0.46	+2.1
2,215,172	+		PGA1_c21380	0.46	+0.2
2,215,172	+		PGA1_c21380	0.46	+0.5
2,215,216	-		PGA1_c21380	0.48	+0.7
2,215,232	+		PGA1_c21380	0.49	+0.4
2,215,269	+		PGA1_c21380	0.50	+1.0
2,215,323	+		PGA1_c21380	0.53	-0.5
2,215,581	-		PGA1_c21380	0.65	+0.2
2,215,607	+		PGA1_c21380	0.67	+0.7
2,215,629	+		PGA1_c21380	0.68	+0.1
2,215,687	+		PGA1_c21380	0.71	-0.3
2,215,697	+		PGA1_c21380	0.71	+3.1
2,215,708	-		PGA1_c21380	0.72	+0.4
2,215,721	-		PGA1_c21380	0.72	+1.7
2,215,733	-		PGA1_c21380	0.73	+0.7
2,215,743	+		PGA1_c21380	0.73	+0.9
2,215,752	-		PGA1_c21380	0.74	-0.8
2,215,808	-		PGA1_c21380	0.76	-1.1
2,215,859	+		PGA1_c21380	0.79	-0.5
2,215,867	-		PGA1_c21380	0.79	-0.8
2,215,869	+		PGA1_c21380	0.79	+1.0
2,215,898	+		PGA1_c21380	0.81	-2.1
2,215,914	+		PGA1_c21380	0.82	+0.7
2,215,959	+		PGA1_c21380	0.84	-1.0
2,216,011	-		PGA1_c21380	0.86	+0.3
2,216,036	+		PGA1_c21380	0.87	-0.3
2,216,051	+		PGA1_c21380	0.88	+0.3
2,216,092	+				-0.5
2,216,102	+				-0.5
2,216,109	-				+0.3
2,216,110	-				+0.2
2,216,138	+				-0.8
2,216,159	-				-1.1
2,216,206	+				+1.2
2,216,272	-				+0.9
2,216,318	-				+1.7
2,216,342	+				-1.8
2,216,348	+				+0.4
2,216,376	-				+0.7
2,216,389	+				+0.7
2,216,389	+				+0.5
2,216,389	+				+1.6
2,216,389	+				+2.2
2,216,389	+				-0.4
2,216,397	-				-0.6
2,216,397	-				-2.1
2,216,397	-				+1.2
2,216,397	-				+0.5
2,216,397	-				-2.4
2,216,397	-				-0.8
2,216,397	-				+2.2
2,216,397	-				-0.0
2,216,397	-				-0.3
2,216,397	-				-1.0
2,216,397	-				-0.9
2,216,397	-				+1.1
2,216,397	-				+1.1
2,216,397	-				-0.3
2,216,397	-				+0.0
2,216,397	-				+2.6
2,216,420	+				+1.7
2,216,458	+		PGA1_c21390	0.15	-1.0
2,216,466	-		PGA1_c21390	0.16	-0.4
2,216,497	-		PGA1_c21390	0.20	-1.7
2,216,618	+		PGA1_c21390	0.38	+0.4
2,216,626	-		PGA1_c21390	0.39	+0.6
2,216,674	+		PGA1_c21390	0.46	-1.1
2,216,674	+		PGA1_c21390	0.46	+0.4
2,216,677	-		PGA1_c21390	0.46	+2.1
2,216,721	-		PGA1_c21390	0.53	-0.8
2,216,794	+		PGA1_c21390	0.63	-0.6
2,216,814	-		PGA1_c21390	0.66	+0.5
2,216,857	+		PGA1_c21390	0.73	+0.7
2,216,862	-		PGA1_c21390	0.73	+1.0
2,216,965	+		PGA1_c21390	0.88	-1.4
2,216,965	+		PGA1_c21390	0.88	+0.7
2,216,968	-		PGA1_c21390	0.89	+0.7
2,216,972	-		PGA1_c21390	0.89	-0.8
2,216,973	-		PGA1_c21390	0.90	-0.6
2,217,073	-				+0.7
2,217,073	-				-2.3