Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30820

Experiment: m.b. nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrate 100 mM
3,218,084	+				-1.1
3,218,126	+				+2.6
3,218,129	-				-2.0
3,218,162	+				+0.2
3,218,162	+				+0.4
3,218,165	-				-0.2
3,218,170	-				+0.9
3,218,204	+		PGA1_c30810	0.10	-0.4
3,218,204	+		PGA1_c30810	0.10	+1.0
3,218,212	-		PGA1_c30810	0.11	-0.9
3,218,212	-		PGA1_c30810	0.11	-1.4
3,218,236	+		PGA1_c30810	0.14	+1.3
3,218,286	+		PGA1_c30810	0.19	-0.4
3,218,303	-		PGA1_c30810	0.20	+0.9
3,218,321	-		PGA1_c30810	0.22	+2.2
3,218,329	-		PGA1_c30810	0.23	-0.7
3,218,330	+		PGA1_c30810	0.23	+0.0
3,218,330	+		PGA1_c30810	0.23	-1.4
3,218,340	+		PGA1_c30810	0.24	-0.2
3,218,360	+		PGA1_c30810	0.26	+0.1
3,218,399	+		PGA1_c30810	0.30	+0.4
3,218,400	+		PGA1_c30810	0.30	+1.4
3,218,400	+		PGA1_c30810	0.30	-0.4
3,218,400	+		PGA1_c30810	0.30	-1.7
3,218,406	+		PGA1_c30810	0.31	+0.3
3,218,408	-		PGA1_c30810	0.31	+0.9
3,218,408	-		PGA1_c30810	0.31	+0.5
3,218,408	-		PGA1_c30810	0.31	+0.5
3,218,408	-		PGA1_c30810	0.31	-2.0
3,218,408	-		PGA1_c30810	0.31	-0.4
3,218,408	-		PGA1_c30810	0.31	+1.3
3,218,408	-		PGA1_c30810	0.31	+0.8
3,218,408	-		PGA1_c30810	0.31	+0.8
3,218,492	+		PGA1_c30810	0.40	+0.6
3,218,492	+		PGA1_c30810	0.40	+0.6
3,218,492	+		PGA1_c30810	0.40	+0.4
3,218,492	+		PGA1_c30810	0.40	+0.5
3,218,579	+		PGA1_c30810	0.49	+0.8
3,218,590	+		PGA1_c30810	0.50	+0.7
3,218,590	+		PGA1_c30810	0.50	+0.8
3,218,590	+		PGA1_c30810	0.50	-0.2
3,218,590	+		PGA1_c30810	0.50	-1.5
3,218,590	+		PGA1_c30810	0.50	+1.1
3,218,598	-		PGA1_c30810	0.51	+0.6
3,218,598	-		PGA1_c30810	0.51	+0.3
3,218,598	-		PGA1_c30810	0.51	+0.5
3,218,598	-		PGA1_c30810	0.51	-2.5
3,218,606	+		PGA1_c30810	0.51	-0.5
3,218,606	+		PGA1_c30810	0.51	-0.2
3,218,606	+		PGA1_c30810	0.51	-0.2
3,218,606	+		PGA1_c30810	0.51	+0.3
3,218,606	+		PGA1_c30810	0.51	-0.0
3,218,614	-		PGA1_c30810	0.52	-0.8
3,218,614	-		PGA1_c30810	0.52	+0.9
3,218,658	-		PGA1_c30810	0.57	-0.4
3,218,667	-		PGA1_c30810	0.58	+0.1
3,218,693	+		PGA1_c30810	0.60	+0.8
3,218,693	+		PGA1_c30810	0.60	-0.6
3,218,711	+		PGA1_c30810	0.62	+2.5
3,218,743	-		PGA1_c30810	0.65	-1.2
3,218,749	+		PGA1_c30810	0.66	+1.2
3,218,752	+		PGA1_c30810	0.66	+0.6
3,218,755	-		PGA1_c30810	0.67	+0.9
3,218,760	-		PGA1_c30810	0.67	+0.6
3,218,762	+		PGA1_c30810	0.67	+0.0
3,218,770	-		PGA1_c30810	0.68	+0.5
3,218,775	+		PGA1_c30810	0.69	-0.7
3,218,783	-		PGA1_c30810	0.69	+0.6
3,218,783	-		PGA1_c30810	0.69	+0.3
3,218,783	-		PGA1_c30810	0.69	+0.3
3,218,783	-		PGA1_c30810	0.69	+0.5
3,218,790	+		PGA1_c30810	0.70	+0.0
3,218,820	+		PGA1_c30810	0.73	-0.4
3,218,820	+		PGA1_c30810	0.73	+1.2
3,218,878	-		PGA1_c30810	0.79	-0.2
3,218,999	-				+0.6
3,218,999	-				+0.6
3,219,036	+				+0.1
3,219,040	+				+0.2
3,219,044	-				+0.4
3,219,046	+				-2.4
3,219,059	-				-1.4
3,219,100	-				-0.1
3,219,108	-				+1.3
3,219,108	-				+1.0
3,219,139	+				+0.8
3,219,148	+				-0.7
3,219,149	-				-0.2
3,219,149	-				-0.4
3,219,159	-				-1.2
3,219,240	-		PGA1_c30820	0.17	+0.0
3,219,242	+		PGA1_c30820	0.17	+0.3
3,219,242	+		PGA1_c30820	0.17	+0.4
3,219,242	+		PGA1_c30820	0.17	-1.4
3,219,242	+		PGA1_c30820	0.17	-0.6
3,219,242	+		PGA1_c30820	0.17	-1.5
3,219,242	+		PGA1_c30820	0.17	+0.9
3,219,242	+		PGA1_c30820	0.17	+0.9
3,219,242	+		PGA1_c30820	0.17	-0.3
3,219,242	+		PGA1_c30820	0.17	+1.3
3,219,242	+		PGA1_c30820	0.17	+0.5
3,219,242	+		PGA1_c30820	0.17	+0.6
3,219,250	-		PGA1_c30820	0.18	-0.6
3,219,250	-		PGA1_c30820	0.18	+0.9
3,219,250	-		PGA1_c30820	0.18	-1.0
3,219,250	-		PGA1_c30820	0.18	+0.1
3,219,250	-		PGA1_c30820	0.18	+0.2
3,219,250	-		PGA1_c30820	0.18	+0.5
3,219,250	-		PGA1_c30820	0.18	-0.2
3,219,250	-		PGA1_c30820	0.18	+1.4
3,219,255	-		PGA1_c30820	0.18	+0.2
3,219,271	+		PGA1_c30820	0.20	+0.5
3,219,291	+		PGA1_c30820	0.22	+0.6
3,219,291	+		PGA1_c30820	0.22	-0.7
3,219,291	-		PGA1_c30820	0.22	+1.2
3,219,294	+		PGA1_c30820	0.22	-0.5
3,219,313	+		PGA1_c30820	0.24	+1.0
3,219,342	+		PGA1_c30820	0.27	+1.8
3,219,342	+		PGA1_c30820	0.27	+0.6
3,219,342	+		PGA1_c30820	0.27	-0.4
3,219,342	+		PGA1_c30820	0.27	+0.5
3,219,350	-		PGA1_c30820	0.28	-0.8
3,219,350	-		PGA1_c30820	0.28	+0.2
3,219,350	-		PGA1_c30820	0.28	-0.4
3,219,350	-		PGA1_c30820	0.28	+0.4
3,219,391	+		PGA1_c30820	0.32	+0.9
3,219,391	+		PGA1_c30820	0.32	+1.8
3,219,391	-		PGA1_c30820	0.32	+1.9
3,219,409	+		PGA1_c30820	0.34	-1.0
3,219,409	+		PGA1_c30820	0.34	+1.6
3,219,423	+		PGA1_c30820	0.36	+0.4
3,219,439	-		PGA1_c30820	0.37	+0.5
3,219,598	-		PGA1_c30820	0.54	+0.8
3,219,598	-		PGA1_c30820	0.54	-0.5
3,219,605	+		PGA1_c30820	0.55	-0.2
3,219,613	-		PGA1_c30820	0.55	+0.4
3,219,613	-		PGA1_c30820	0.55	+0.4
3,219,613	-		PGA1_c30820	0.55	+0.8
3,219,613	-		PGA1_c30820	0.55	+0.9
3,219,615	+		PGA1_c30820	0.56	-0.2
3,219,623	-		PGA1_c30820	0.56	+1.5
3,219,623	-		PGA1_c30820	0.56	+0.9
3,219,660	-		PGA1_c30820	0.60	+1.7
3,219,695	-		PGA1_c30820	0.64	-1.4
3,219,742	-		PGA1_c30820	0.69	+0.9
3,219,747	-		PGA1_c30820	0.69	+0.7
3,219,774	-		PGA1_c30820	0.72	+1.9
3,219,789	-		PGA1_c30820	0.74	+2.5
3,219,880	+		PGA1_c30820	0.83	+2.2
3,219,887	+		PGA1_c30820	0.84	+0.6
3,219,887	+		PGA1_c30820	0.84	-0.3
3,219,887	+		PGA1_c30820	0.84	-0.8
3,219,891	-		PGA1_c30820	0.84	-0.1
3,219,895	-		PGA1_c30820	0.85	+0.0
3,219,929	+		PGA1_c30820	0.88	+0.2
3,219,990	-				+1.4
3,220,005	-				+1.7
3,220,016	+				+0.8
3,220,016	+				+0.9
3,220,024	-				-0.5
3,220,029	-				-0.4
3,220,029	-				+0.4
3,220,029	-				+1.2
3,220,029	-				+0.1
3,220,068	+				-1.2
3,220,068	+				+0.6
3,220,076	-				-1.4
3,220,076	-				+0.6
3,220,076	-				-0.5
3,220,076	-				+0.4
3,220,081	-				+1.5
3,220,096	-				-0.1
3,220,132	-				-0.3
3,220,204	-				+0.6
3,220,204	-				-0.6
3,220,218	-				-1.1
3,220,226	-				-0.0
3,220,237	+				+1.1
3,220,289	+		PGA1_c30830	0.11	+0.9
3,220,297	-		PGA1_c30830	0.11	+0.5
3,220,305	+		PGA1_c30830	0.12	-0.4
3,220,316	+		PGA1_c30830	0.13	+0.0
3,220,341	-		PGA1_c30830	0.15	-0.1
3,220,369	-		PGA1_c30830	0.17	+1.0
3,220,374	-		PGA1_c30830	0.17	+1.9
3,220,381	+		PGA1_c30830	0.18	-0.3
3,220,415	+		PGA1_c30830	0.21	+1.2
3,220,416	+		PGA1_c30830	0.21	+0.2
3,220,422	-		PGA1_c30830	0.21	+0.6
3,220,448	-		PGA1_c30830	0.23	-0.4
3,220,449	-		PGA1_c30830	0.23	+0.6
3,220,468	-		PGA1_c30830	0.25	-0.2
3,220,548	+		PGA1_c30830	0.31	+0.3
3,220,549	-		PGA1_c30830	0.31	+0.4
3,220,556	-		PGA1_c30830	0.32	-0.8
3,220,556	-		PGA1_c30830	0.32	+1.0
3,220,563	-		PGA1_c30830	0.33	+0.3
3,220,563	-		PGA1_c30830	0.33	+2.1
3,220,619	+		PGA1_c30830	0.37	+1.1
3,220,640	-		PGA1_c30830	0.39	+0.9
3,220,641	-		PGA1_c30830	0.39	+0.8
3,220,677	+		PGA1_c30830	0.42	+0.3
3,220,677	+		PGA1_c30830	0.42	-1.4
3,220,685	-		PGA1_c30830	0.42	+0.1
3,220,716	-		PGA1_c30830	0.45	-1.0
3,220,739	-		PGA1_c30830	0.47	-0.1
3,220,742	+		PGA1_c30830	0.47	+0.4
3,220,758	+		PGA1_c30830	0.48	+0.6
3,220,789	+		PGA1_c30830	0.51	-0.5
3,220,789	+		PGA1_c30830	0.51	-1.4
3,220,789	+		PGA1_c30830	0.51	+1.6
3,220,789	+		PGA1_c30830	0.51	-0.2
3,220,789	+		PGA1_c30830	0.51	-0.7
3,220,789	+		PGA1_c30830	0.51	+0.4
3,220,789	+		PGA1_c30830	0.51	+2.0
3,220,789	+		PGA1_c30830	0.51	+1.4
3,220,789	+		PGA1_c30830	0.51	-0.7
3,220,789	+		PGA1_c30830	0.51	-0.7
3,220,789	+		PGA1_c30830	0.51	+0.3
3,220,789	+		PGA1_c30830	0.51	+1.0
3,220,789	+		PGA1_c30830	0.51	-0.4
3,220,789	+		PGA1_c30830	0.51	+0.4
3,220,789	+		PGA1_c30830	0.51	+1.0
3,220,789	+		PGA1_c30830	0.51	+0.6
3,220,789	+		PGA1_c30830	0.51	+2.5
3,220,789	+		PGA1_c30830	0.51	-0.2
3,220,789	+		PGA1_c30830	0.51	-0.0
3,220,789	+		PGA1_c30830	0.51	+0.6
3,220,789	+		PGA1_c30830	0.51	+1.0
3,220,789	+		PGA1_c30830	0.51	+0.0
3,220,789	+		PGA1_c30830	0.51	+0.9
3,220,797	-		PGA1_c30830	0.51	-0.5
3,220,797	-		PGA1_c30830	0.51	-3.3
3,220,797	-		PGA1_c30830	0.51	-0.6
3,220,797	-		PGA1_c30830	0.51	+1.6
3,220,797	-		PGA1_c30830	0.51	+0.1
3,220,797	-		PGA1_c30830	0.51	-0.1
3,220,797	-		PGA1_c30830	0.51	+0.9
3,220,797	-		PGA1_c30830	0.51	+1.0
3,220,797	-		PGA1_c30830	0.51	+0.9
3,220,797	-		PGA1_c30830	0.51	+0.2
3,220,797	-		PGA1_c30830	0.51	-0.4
3,220,797	-		PGA1_c30830	0.51	-1.5
3,220,797	-		PGA1_c30830	0.51	+0.8
3,220,799	+		PGA1_c30830	0.52	+1.1
3,220,799	+		PGA1_c30830	0.52	+0.3
3,220,799	+		PGA1_c30830	0.52	-0.3
3,220,799	+		PGA1_c30830	0.52	-0.1
3,220,799	+		PGA1_c30830	0.52	-1.0
3,220,799	+		PGA1_c30830	0.52	+0.6
3,220,801	+		PGA1_c30830	0.52	+0.6
3,220,801	+		PGA1_c30830	0.52	+0.2
3,220,807	+		PGA1_c30830	0.52	+0.5
3,220,809	-		PGA1_c30830	0.52	-0.2
3,220,812	+		PGA1_c30830	0.53	+1.3
3,220,817	+		PGA1_c30830	0.53	+0.1
3,220,917	+		PGA1_c30830	0.61	-0.0
3,220,927	+		PGA1_c30830	0.62	+0.9
3,220,936	-		PGA1_c30830	0.62	-0.5
3,220,986	+		PGA1_c30830	0.67	+1.1
3,220,986	+		PGA1_c30830	0.67	+1.4
3,221,006	+		PGA1_c30830	0.68	-0.8
3,221,006	+		PGA1_c30830	0.68	+0.8
3,221,007	+		PGA1_c30830	0.68	-0.1
3,221,007	+		PGA1_c30830	0.68	-1.4
3,221,015	-		PGA1_c30830	0.69	-1.8