Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27460

Experiment: m.b. nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrate 100 mM
2,859,800	+		PGA1_c27440	0.64	-2.2
2,859,808	-		PGA1_c27440	0.65	+1.0
2,859,808	-		PGA1_c27440	0.65	-0.7
2,859,820	+		PGA1_c27440	0.67	-0.8
2,859,864	-		PGA1_c27440	0.74	+0.1
2,859,872	-		PGA1_c27440	0.75	-0.4
2,859,933	-		PGA1_c27440	0.84	+0.0
2,859,974	+				-2.2
2,859,988	+				+0.3
2,859,988	+				-0.4
2,859,988	+				+0.7
2,859,996	-				-0.3
2,859,996	-				-0.7
2,860,038	-				-0.2
2,860,038	-				+0.7
2,860,046	+				+0.1
2,860,046	+				-0.1
2,860,054	-				-1.8
2,860,054	-				-1.8
2,860,082	-				-0.5
2,860,127	+		PGA1_c27450	0.13	+0.8
2,860,127	-		PGA1_c27450	0.13	+1.1
2,860,153	-		PGA1_c27450	0.17	-1.9
2,860,185	-		PGA1_c27450	0.22	-0.5
2,860,230	+		PGA1_c27450	0.28	+0.5
2,860,246	+		PGA1_c27450	0.30	+0.7
2,860,267	-		PGA1_c27450	0.33	+0.8
2,860,267	-		PGA1_c27450	0.33	+0.8
2,860,399	+		PGA1_c27450	0.52	-0.8
2,860,402	-		PGA1_c27450	0.53	-1.4
2,860,402	-		PGA1_c27450	0.53	+0.3
2,860,402	-		PGA1_c27450	0.53	-1.6
2,860,413	+		PGA1_c27450	0.54	+0.9
2,860,421	-		PGA1_c27450	0.56	+0.9
2,860,472	+		PGA1_c27450	0.63	+0.1
2,860,496	-		PGA1_c27450	0.66	-0.1
2,860,525	-		PGA1_c27450	0.71	-0.2
2,860,576	+		PGA1_c27450	0.78	-0.2
2,860,669	-				-1.1
2,860,696	+				-0.2
2,860,704	-				+0.3
2,860,718	+				+0.3
2,860,723	+				-0.0
2,860,771	-				-0.6
2,860,796	+				-1.0
2,860,796	+				+0.1
2,860,796	+				-0.5
2,860,796	+				-0.1
2,860,804	-				+0.2
2,860,804	-				+0.0
2,860,804	-				+0.8
2,860,847	-				+0.1
2,860,858	-				-1.1
2,860,858	-				+0.3
2,860,858	-				-1.5
2,860,880	-				-0.7
2,860,884	+				-0.5
2,860,889	+				-0.7
2,860,897	-				-0.2
2,860,978	-		PGA1_c27460	0.16	+0.1
2,861,015	-		PGA1_c27460	0.19	-0.6
2,861,021	-		PGA1_c27460	0.20	+0.1
2,861,100	+		PGA1_c27460	0.27	+0.3
2,861,100	+		PGA1_c27460	0.27	-0.7
2,861,100	+		PGA1_c27460	0.27	-0.2
2,861,122	+		PGA1_c27460	0.29	-0.8
2,861,122	+		PGA1_c27460	0.29	+0.1
2,861,122	+		PGA1_c27460	0.29	-0.7
2,861,122	+		PGA1_c27460	0.29	+0.6
2,861,139	-		PGA1_c27460	0.30	-0.3
2,861,152	+		PGA1_c27460	0.31	-0.5
2,861,170	-		PGA1_c27460	0.33	-0.7
2,861,170	-		PGA1_c27460	0.33	-1.8
2,861,170	-		PGA1_c27460	0.33	+0.5
2,861,170	-		PGA1_c27460	0.33	+0.2
2,861,170	-		PGA1_c27460	0.33	-0.1
2,861,170	-		PGA1_c27460	0.33	+0.6
2,861,170	-		PGA1_c27460	0.33	-2.7
2,861,170	-		PGA1_c27460	0.33	-0.2
2,861,170	-		PGA1_c27460	0.33	+0.5
2,861,180	-		PGA1_c27460	0.34	-0.0
2,861,181	-		PGA1_c27460	0.34	+1.9
2,861,188	+		PGA1_c27460	0.34	+0.2
2,861,189	+		PGA1_c27460	0.34	-1.7
2,861,196	+		PGA1_c27460	0.35	+0.0
2,861,217	+		PGA1_c27460	0.37	-0.1
2,861,225	-		PGA1_c27460	0.38	-1.7
2,861,230	-		PGA1_c27460	0.38	-0.2
2,861,238	+		PGA1_c27460	0.39	-0.5
2,861,245	+		PGA1_c27460	0.39	-1.1
2,861,260	-		PGA1_c27460	0.41	-0.1
2,861,327	+		PGA1_c27460	0.47	-1.1
2,861,335	-		PGA1_c27460	0.47	+0.4
2,861,448	+		PGA1_c27460	0.57	+0.3
2,861,458	+		PGA1_c27460	0.58	-1.5
2,861,506	-		PGA1_c27460	0.63	-0.9
2,861,508	+		PGA1_c27460	0.63	+0.1
2,861,516	-		PGA1_c27460	0.63	+0.8
2,861,516	-		PGA1_c27460	0.63	+0.2
2,861,516	-		PGA1_c27460	0.63	+0.5
2,861,521	-		PGA1_c27460	0.64	-1.2
2,861,540	-		PGA1_c27460	0.66	-0.3
2,861,540	-		PGA1_c27460	0.66	+0.2
2,861,581	+		PGA1_c27460	0.69	-0.7
2,861,589	-		PGA1_c27460	0.70	+0.4
2,861,631	+		PGA1_c27460	0.74	+0.7
2,861,636	+		PGA1_c27460	0.74	-0.2
2,861,636	+		PGA1_c27460	0.74	-1.1
2,861,639	-		PGA1_c27460	0.74	-0.8
2,861,639	-		PGA1_c27460	0.74	-0.2
2,861,639	-		PGA1_c27460	0.74	-1.3
2,861,644	-		PGA1_c27460	0.75	+0.1
2,861,677	-		PGA1_c27460	0.78	-0.4
2,861,715	+		PGA1_c27460	0.81	-0.0
2,861,756	-		PGA1_c27460	0.85	-0.1
2,861,769	-		PGA1_c27460	0.86	-0.5
2,861,781	+		PGA1_c27460	0.87	-1.4
2,861,781	-		PGA1_c27460	0.87	+0.1
2,861,790	+		PGA1_c27460	0.88	+0.6
2,861,795	+		PGA1_c27460	0.88	+0.3
2,861,803	-		PGA1_c27460	0.89	-0.5
2,861,825	+				-0.3
2,861,833	-				-1.3
2,861,833	-				-0.7
2,861,848	-				-0.3
2,861,876	+				+1.0
2,861,876	+				-0.2
2,861,904	-				-0.2
2,861,908	+				+1.6
2,861,911	-				-1.1
2,861,916	-				-0.0
2,861,916	-				-0.3
2,861,934	+				+0.4
2,861,942	-				-0.6
2,861,942	-				-0.8
2,861,942	-				-1.1
2,861,942	-				-0.7
2,861,942	-				+1.0
2,861,942	-				-1.0
2,861,944	+				+1.6
2,861,947	-				-1.2
2,861,952	-				-0.2
2,861,969	-				-1.2
2,861,986	+				+0.3
2,861,994	-				+0.2
2,862,011	-				+1.1
2,862,014	-				-0.1
2,862,022	-				+0.0
2,862,024	+				+0.6
2,862,041	-				-2.0
2,862,068	+				+0.0
2,862,139	+		PGA1_c27470	0.14	-0.5
2,862,139	+		PGA1_c27470	0.14	+1.1
2,862,147	-		PGA1_c27470	0.14	-2.0
2,862,157	+		PGA1_c27470	0.16	-3.2
2,862,157	+		PGA1_c27470	0.16	+0.1
2,862,157	+		PGA1_c27470	0.16	-0.0
2,862,157	+		PGA1_c27470	0.16	-0.2
2,862,157	+		PGA1_c27470	0.16	-0.1
2,862,162	+		PGA1_c27470	0.16	-0.3
2,862,165	-		PGA1_c27470	0.16	-2.5
2,862,165	-		PGA1_c27470	0.16	-1.4
2,862,172	+		PGA1_c27470	0.17	-0.4
2,862,196	+		PGA1_c27470	0.20	+0.1
2,862,199	-		PGA1_c27470	0.20	-1.2
2,862,203	-		PGA1_c27470	0.20	+0.2
2,862,216	+		PGA1_c27470	0.22	+0.4
2,862,245	-		PGA1_c27470	0.25	+0.9
2,862,269	-		PGA1_c27470	0.27	-1.8
2,862,269	-		PGA1_c27470	0.27	+0.2
2,862,294	+		PGA1_c27470	0.30	+0.3
2,862,294	+		PGA1_c27470	0.30	+0.8
2,862,294	+		PGA1_c27470	0.30	+0.7
2,862,302	-		PGA1_c27470	0.31	-0.3
2,862,302	-		PGA1_c27470	0.31	+0.6
2,862,302	-		PGA1_c27470	0.31	+0.1
2,862,302	-		PGA1_c27470	0.31	-0.9
2,862,302	-		PGA1_c27470	0.31	-0.3
2,862,302	-		PGA1_c27470	0.31	-0.4
2,862,302	-		PGA1_c27470	0.31	+0.3
2,862,302	-		PGA1_c27470	0.31	-0.5
2,862,304	+		PGA1_c27470	0.31	-0.0
2,862,305	+		PGA1_c27470	0.31	-1.3
2,862,307	+		PGA1_c27470	0.32	-1.9
2,862,313	-		PGA1_c27470	0.32	-0.2
2,862,320	-		PGA1_c27470	0.33	-2.7
2,862,341	+		PGA1_c27470	0.35	-0.4
2,862,341	+		PGA1_c27470	0.35	-1.3
2,862,399	+		PGA1_c27470	0.41	-1.7
2,862,399	+		PGA1_c27470	0.41	+0.6
2,862,404	+		PGA1_c27470	0.42	+0.5
2,862,422	+		PGA1_c27470	0.44	-0.8
2,862,446	+		PGA1_c27470	0.46	-0.4
2,862,446	+		PGA1_c27470	0.46	+1.2
2,862,454	-		PGA1_c27470	0.47	-0.9
2,862,454	-		PGA1_c27470	0.47	+0.7
2,862,475	-		PGA1_c27470	0.49	+0.2
2,862,478	+		PGA1_c27470	0.50	-1.8
2,862,478	+		PGA1_c27470	0.50	-1.8
2,862,478	+		PGA1_c27470	0.50	+0.3
2,862,483	+		PGA1_c27470	0.50	-0.8
2,862,483	+		PGA1_c27470	0.50	-0.7
2,862,485	+		PGA1_c27470	0.50	+0.2
2,862,486	-		PGA1_c27470	0.51	-1.2
2,862,491	-		PGA1_c27470	0.51	-1.3
2,862,491	-		PGA1_c27470	0.51	+0.3
2,862,493	+		PGA1_c27470	0.51	+0.0
2,862,493	+		PGA1_c27470	0.51	-1.1
2,862,493	+		PGA1_c27470	0.51	+0.2
2,862,493	+		PGA1_c27470	0.51	+0.3
2,862,493	+		PGA1_c27470	0.51	+0.2
2,862,493	+		PGA1_c27470	0.51	+1.1
2,862,493	+		PGA1_c27470	0.51	+0.8
2,862,493	+		PGA1_c27470	0.51	-0.2
2,862,493	+		PGA1_c27470	0.51	-0.8
2,862,493	+		PGA1_c27470	0.51	+0.3
2,862,493	+		PGA1_c27470	0.51	-0.6
2,862,493	-		PGA1_c27470	0.51	-2.2
2,862,493	-		PGA1_c27470	0.51	-0.4
2,862,498	-		PGA1_c27470	0.52	-0.0
2,862,501	-		PGA1_c27470	0.52	-0.1
2,862,501	-		PGA1_c27470	0.52	-1.6
2,862,501	-		PGA1_c27470	0.52	-0.3
2,862,501	-		PGA1_c27470	0.52	+0.2
2,862,501	-		PGA1_c27470	0.52	+0.4
2,862,501	-		PGA1_c27470	0.52	-0.2
2,862,501	-		PGA1_c27470	0.52	-0.1
2,862,501	-		PGA1_c27470	0.52	+1.3
2,862,501	-		PGA1_c27470	0.52	-1.2
2,862,503	-		PGA1_c27470	0.52	+0.3
2,862,508	-		PGA1_c27470	0.53	-0.1
2,862,531	+		PGA1_c27470	0.55	+0.7
2,862,532	-		PGA1_c27470	0.55	+1.4
2,862,532	-		PGA1_c27470	0.55	-1.0
2,862,539	+		PGA1_c27470	0.56	-1.2
2,862,547	-		PGA1_c27470	0.57	-1.2
2,862,557	+		PGA1_c27470	0.58	-0.7
2,862,557	+		PGA1_c27470	0.58	-0.2
2,862,557	+		PGA1_c27470	0.58	-0.2
2,862,557	+		PGA1_c27470	0.58	-0.8
2,862,557	+		PGA1_c27470	0.58	-0.7
2,862,557	+		PGA1_c27470	0.58	-1.2
2,862,557	+		PGA1_c27470	0.58	-0.3
2,862,565	-		PGA1_c27470	0.59	-0.6
2,862,565	-		PGA1_c27470	0.59	-1.7
2,862,565	-		PGA1_c27470	0.59	-0.3
2,862,565	-		PGA1_c27470	0.59	+0.3
2,862,565	-		PGA1_c27470	0.59	-0.2
2,862,565	-		PGA1_c27470	0.59	-0.0
2,862,565	-		PGA1_c27470	0.59	+0.7
2,862,567	+		PGA1_c27470	0.59	+1.0
2,862,569	+		PGA1_c27470	0.59	+0.3
2,862,569	+		PGA1_c27470	0.59	-0.8
2,862,569	+		PGA1_c27470	0.59	-0.7
2,862,570	+		PGA1_c27470	0.60	-0.5
2,862,575	-		PGA1_c27470	0.60	+0.0
2,862,577	-		PGA1_c27470	0.60	+1.7
2,862,577	-		PGA1_c27470	0.60	-1.2
2,862,577	-		PGA1_c27470	0.60	-1.6
2,862,577	-		PGA1_c27470	0.60	+0.2
2,862,601	-		PGA1_c27470	0.63	+1.0
2,862,605	+		PGA1_c27470	0.63	+0.3
2,862,606	-		PGA1_c27470	0.63	-0.5
2,862,628	+		PGA1_c27470	0.66	-0.1
2,862,636	-		PGA1_c27470	0.67	+1.3
2,862,640	-		PGA1_c27470	0.67	-0.3
2,862,658	-		PGA1_c27470	0.69	-0.4
2,862,664	+		PGA1_c27470	0.70	+0.8
2,862,672	-		PGA1_c27470	0.70	-0.4
2,862,672	-		PGA1_c27470	0.70	-1.0
2,862,672	-		PGA1_c27470	0.70	+0.6
2,862,672	-		PGA1_c27470	0.70	+1.1
2,862,691	-		PGA1_c27470	0.72	-0.1
2,862,699	+		PGA1_c27470	0.73	+1.0
2,862,699	+		PGA1_c27470	0.73	-0.0
2,862,707	-		PGA1_c27470	0.74	-0.9
2,862,709	+		PGA1_c27470	0.74	+0.9
2,862,709	+		PGA1_c27470	0.74	+0.9
2,862,709	+		PGA1_c27470	0.74	-0.9
2,862,709	+		PGA1_c27470	0.74	-0.2
2,862,709	+		PGA1_c27470	0.74	-0.5
2,862,709	+		PGA1_c27470	0.74	-0.1
2,862,709	+		PGA1_c27470	0.74	+0.9
2,862,709	+		PGA1_c27470	0.74	-0.1
2,862,709	+		PGA1_c27470	0.74	-1.4
2,862,709	+		PGA1_c27470	0.74	-1.2
2,862,709	+		PGA1_c27470	0.74	-0.2
2,862,709	+		PGA1_c27470	0.74	-0.3
2,862,709	+		PGA1_c27470	0.74	-0.3
2,862,709	+		PGA1_c27470	0.74	+0.6
2,862,709	+		PGA1_c27470	0.74	-1.2
2,862,709	+		PGA1_c27470	0.74	+1.0
2,862,709	+		PGA1_c27470	0.74	-0.8
2,862,709	+		PGA1_c27470	0.74	+0.5
2,862,709	+		PGA1_c27470	0.74	-0.5
2,862,709	+		PGA1_c27470	0.74	-2.8
2,862,709	+		PGA1_c27470	0.74	+1.0
2,862,709	+		PGA1_c27470	0.74	+0.3
2,862,709	+		PGA1_c27470	0.74	-0.9
2,862,709	+		PGA1_c27470	0.74	-0.8
2,862,709	+		PGA1_c27470	0.74	-0.0
2,862,709	+		PGA1_c27470	0.74	+0.7
2,862,709	+		PGA1_c27470	0.74	-0.6
2,862,717	-		PGA1_c27470	0.75	+0.5
2,862,717	-		PGA1_c27470	0.75	-1.2
2,862,717	-		PGA1_c27470	0.75	-0.1
2,862,717	-		PGA1_c27470	0.75	+0.9
2,862,717	-		PGA1_c27470	0.75	-0.2
2,862,717	-		PGA1_c27470	0.75	-0.1
2,862,717	-		PGA1_c27470	0.75	-0.8
2,862,717	-		PGA1_c27470	0.75	-0.4
2,862,717	-		PGA1_c27470	0.75	+1.3
2,862,717	-		PGA1_c27470	0.75	+0.7
2,862,717	-		PGA1_c27470	0.75	-0.2
2,862,717	-		PGA1_c27470	0.75	-1.1
2,862,717	-		PGA1_c27470	0.75	+0.3
2,862,717	-		PGA1_c27470	0.75	-1.0
2,862,717	-		PGA1_c27470	0.75	-0.1
2,862,717	-		PGA1_c27470	0.75	+0.8
2,862,717	-		PGA1_c27470	0.75	-1.1
2,862,717	-		PGA1_c27470	0.75	-0.5
2,862,717	-		PGA1_c27470	0.75	-0.5
2,862,717	-		PGA1_c27470	0.75	+1.1
2,862,717	-		PGA1_c27470	0.75	-0.8
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