Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c00210

Experiment: m.b. nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrate 100 mM
22,040	+				+0.0
22,040	+				+0.7
22,054	+				+0.0
22,063	+				-0.3
22,063	+				+0.7
22,070	+				+0.4
22,071	-				+0.9
22,071	-				+0.7
22,071	-				+0.5
22,071	-				+0.0
22,071	-				-1.3
22,078	-				+0.0
22,157	-				+0.2
22,247	+				-0.7
22,252	+				-0.3
22,252	+				+0.3
22,255	-				-0.1
22,255	-				-0.3
22,256	+				-1.6
22,264	-				-0.3
22,280	-				-0.7
22,296	+				-0.5
22,301	+				+1.1
22,306	+				+0.2
22,309	-				-2.1
22,311	+				+0.1
22,349	-				+1.9
22,353	-				-1.5
22,373	+		PGA1_c00210	0.10	-0.5
22,392	-		PGA1_c00210	0.13	+0.5
22,420	+		PGA1_c00210	0.16	-0.1
22,441	+		PGA1_c00210	0.18	-2.3
22,444	-		PGA1_c00210	0.18	-0.9
22,452	+		PGA1_c00210	0.19	-0.7
22,452	+		PGA1_c00210	0.19	+0.2
22,452	+		PGA1_c00210	0.19	-0.2
22,452	+		PGA1_c00210	0.19	-1.1
22,452	+		PGA1_c00210	0.19	-0.1
22,452	+		PGA1_c00210	0.19	-0.6
22,460	-		PGA1_c00210	0.20	-0.1
22,460	-		PGA1_c00210	0.20	-1.1
22,460	-		PGA1_c00210	0.20	-0.9
22,460	-		PGA1_c00210	0.20	-0.7
22,462	+		PGA1_c00210	0.20	+0.2
22,462	+		PGA1_c00210	0.20	+1.0
22,528	+		PGA1_c00210	0.28	+0.2
22,528	+		PGA1_c00210	0.28	-1.4
22,528	+		PGA1_c00210	0.28	+1.8
22,528	+		PGA1_c00210	0.28	+1.0
22,535	+		PGA1_c00210	0.29	-0.1
22,536	-		PGA1_c00210	0.29	+0.2
22,536	-		PGA1_c00210	0.29	-0.1
22,536	-		PGA1_c00210	0.29	+0.1
22,536	-		PGA1_c00210	0.29	-0.4
22,536	-		PGA1_c00210	0.29	-1.0
22,536	-		PGA1_c00210	0.29	-0.2
22,536	-		PGA1_c00210	0.29	-0.5
22,536	-		PGA1_c00210	0.29	+1.1
22,593	-		PGA1_c00210	0.35	-1.8
22,596	+		PGA1_c00210	0.36	-0.3
22,596	+		PGA1_c00210	0.36	-0.1
22,596	+		PGA1_c00210	0.36	-0.3
22,596	+		PGA1_c00210	0.36	+0.6
22,596	+		PGA1_c00210	0.36	+0.7
22,604	-		PGA1_c00210	0.37	-1.0
22,607	+		PGA1_c00210	0.37	-0.0
22,615	-		PGA1_c00210	0.38	+1.0
22,615	-		PGA1_c00210	0.38	-0.1
22,615	-		PGA1_c00210	0.38	+0.2
22,615	-		PGA1_c00210	0.38	+0.7
22,626	+		PGA1_c00210	0.39	+0.7
22,660	-		PGA1_c00210	0.43	-0.1
22,694	+		PGA1_c00210	0.47	+0.4
22,694	+		PGA1_c00210	0.47	-0.4
22,694	+		PGA1_c00210	0.47	+0.2
22,702	-		PGA1_c00210	0.48	-0.7
22,702	-		PGA1_c00210	0.48	-1.5
22,714	+		PGA1_c00210	0.49	+1.4
22,717	-		PGA1_c00210	0.49	-2.1
22,722	+		PGA1_c00210	0.50	-0.2
22,722	+		PGA1_c00210	0.50	-3.8
22,722	+		PGA1_c00210	0.50	-1.1
22,765	+		PGA1_c00210	0.55	+0.7
22,773	-		PGA1_c00210	0.56	-2.2
22,776	+		PGA1_c00210	0.56	-1.8
22,776	+		PGA1_c00210	0.56	+0.9
22,784	-		PGA1_c00210	0.57	+0.2
22,822	+		PGA1_c00210	0.61	-0.9
22,823	-		PGA1_c00210	0.62	-0.7
22,830	-		PGA1_c00210	0.62	-0.2
22,868	+		PGA1_c00210	0.67	+0.7
22,871	+		PGA1_c00210	0.67	-0.2
22,871	-		PGA1_c00210	0.67	+0.5
22,871	-		PGA1_c00210	0.67	-0.2
22,876	-		PGA1_c00210	0.68	+0.3
22,876	-		PGA1_c00210	0.68	-0.6
22,877	+		PGA1_c00210	0.68	+0.1
22,894	-		PGA1_c00210	0.70	-0.4
22,898	-		PGA1_c00210	0.70	-1.0
22,899	-		PGA1_c00210	0.70	-0.6
22,912	+		PGA1_c00210	0.72	+2.9
22,912	+		PGA1_c00210	0.72	+1.1
22,934	+		PGA1_c00210	0.74	-0.7
22,934	+		PGA1_c00210	0.74	+0.0
22,934	+		PGA1_c00210	0.74	+0.0
22,934	+		PGA1_c00210	0.74	+0.1
22,937	-		PGA1_c00210	0.75	-0.2
22,942	-		PGA1_c00210	0.75	-1.1
22,942	-		PGA1_c00210	0.75	-0.3
22,942	-		PGA1_c00210	0.75	+1.4
22,947	+		PGA1_c00210	0.76	+0.5
22,947	+		PGA1_c00210	0.76	+1.6
22,947	+		PGA1_c00210	0.76	-0.5
22,947	+		PGA1_c00210	0.76	-0.5
22,947	+		PGA1_c00210	0.76	-1.0
22,947	+		PGA1_c00210	0.76	+0.5
22,947	+		PGA1_c00210	0.76	-0.5
22,949	-		PGA1_c00210	0.76	+0.5
22,955	-		PGA1_c00210	0.77	-2.0
22,955	-		PGA1_c00210	0.77	+1.5
22,955	-		PGA1_c00210	0.77	-0.5
22,955	-		PGA1_c00210	0.77	+0.3
22,955	-		PGA1_c00210	0.77	-1.2
22,980	+		PGA1_c00210	0.79	-0.3
22,981	+		PGA1_c00210	0.80	-0.7
23,022	+		PGA1_c00210	0.84	-0.1
23,030	-		PGA1_c00210	0.85	-3.7
23,040	+		PGA1_c00210	0.86	-0.1
23,046	-		PGA1_c00210	0.87	-1.3
23,052	+		PGA1_c00210	0.88	-0.0
23,098	+				-0.3
23,167	+				+1.2
23,174	+				-0.2
23,182	-				+0.1
23,199	+				-0.5
23,199	+				+0.2
23,200	+				+0.7
23,200	+				-1.2
23,200	+				-1.5
23,200	+				-0.8
23,208	-				-0.2
23,208	-				-1.2
23,323	+		PGA1_c00220	0.18	-0.1
23,323	+		PGA1_c00220	0.18	-0.2
23,323	+		PGA1_c00220	0.18	+1.6
23,331	-		PGA1_c00220	0.19	-0.6
23,387	-		PGA1_c00220	0.25	-0.5
23,413	-		PGA1_c00220	0.28	+0.1
23,418	-		PGA1_c00220	0.29	-1.0
23,426	+		PGA1_c00220	0.30	+0.1
23,562	-		PGA1_c00220	0.45	+0.2
23,567	+		PGA1_c00220	0.46	+0.1
23,567	+		PGA1_c00220	0.46	-1.6
23,572	+		PGA1_c00220	0.46	-0.2
23,572	+		PGA1_c00220	0.46	+1.1
23,572	+		PGA1_c00220	0.46	-0.7
23,575	-		PGA1_c00220	0.47	+0.4
23,575	-		PGA1_c00220	0.47	+0.7
23,575	-		PGA1_c00220	0.47	-0.1
23,575	-		PGA1_c00220	0.47	-0.5
23,575	-		PGA1_c00220	0.47	+0.8
23,575	-		PGA1_c00220	0.47	-1.3
23,575	-		PGA1_c00220	0.47	+0.2
23,575	-		PGA1_c00220	0.47	+0.6
23,575	-		PGA1_c00220	0.47	-0.7
23,575	-		PGA1_c00220	0.47	+0.4
23,580	-		PGA1_c00220	0.47	+0.1
23,585	-		PGA1_c00220	0.48	-0.3
23,587	-		PGA1_c00220	0.48	+0.7
23,621	+		PGA1_c00220	0.52	-0.3
23,628	+		PGA1_c00220	0.53	-0.2
23,645	+		PGA1_c00220	0.54	+0.1
23,645	+		PGA1_c00220	0.54	+0.3
23,669	+		PGA1_c00220	0.57	+0.2
23,677	-		PGA1_c00220	0.58	-0.4
23,688	-		PGA1_c00220	0.59	-0.7
23,726	+		PGA1_c00220	0.64	-1.1
23,757	+		PGA1_c00220	0.67	+1.7
23,766	+		PGA1_c00220	0.68	-1.0
23,774	+		PGA1_c00220	0.69	+0.2
23,788	+		PGA1_c00220	0.70	+0.8
23,805	+		PGA1_c00220	0.72	-1.9
23,805	-		PGA1_c00220	0.72	-0.3
23,821	+		PGA1_c00220	0.74	-1.2
23,821	+		PGA1_c00220	0.74	+1.7
23,829	-		PGA1_c00220	0.75	+0.7
23,831	+		PGA1_c00220	0.75	-0.2
23,839	-		PGA1_c00220	0.76	+0.3
23,839	-		PGA1_c00220	0.76	-3.8
23,844	+		PGA1_c00220	0.77	+0.9
23,857	+		PGA1_c00220	0.78	+1.2
23,876	+		PGA1_c00220	0.80	-0.5
23,884	-		PGA1_c00220	0.81	+2.2
23,884	-		PGA1_c00220	0.81	+2.1
23,884	-		PGA1_c00220	0.81	-0.5
23,997	-				-0.7
23,997	-				-0.5
24,049	+				+0.7
24,049	+				+0.1
24,057	-				+0.7
24,057	-				+0.8
24,057	-				+0.3
24,057	-				-0.0
24,092	+				+0.7
24,092	+				-1.3
24,100	-				+0.3
24,100	-				+1.5
24,100	-				-0.2