Experiment: Urea as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_960 and HP15_961 are separated by 130 nucleotides
HP15_960: HP15_960 - conserved hypothetical protein, at 975,973 to 976,455
_960
HP15_961: HP15_961 - hypothetical protein, at 976,586 to 976,732
_961
Position (kb) 976
977 Strain fitness (log2 ratio) -2
-1
0
1
2 at 975.588 kb on - strand at 975.607 kb on - strand at 975.622 kb on + strand at 975.622 kb on + strand at 975.655 kb on + strand at 975.769 kb on + strand at 975.795 kb on - strand at 975.798 kb on + strand at 975.798 kb on + strand at 975.798 kb on + strand at 975.798 kb on + strand at 975.806 kb on - strand at 975.822 kb on + strand at 975.979 kb on + strand at 975.980 kb on + strand at 975.980 kb on + strand at 975.988 kb on - strand at 976.014 kb on + strand at 976.017 kb on - strand at 976.070 kb on + strand, within HP15_960 at 976.124 kb on + strand, within HP15_960 at 976.130 kb on - strand, within HP15_960 at 976.207 kb on + strand, within HP15_960 at 976.233 kb on + strand, within HP15_960 at 976.328 kb on - strand, within HP15_960 at 976.450 kb on + strand at 976.505 kb on + strand at 976.596 kb on + strand at 976.641 kb on + strand, within HP15_961 at 976.689 kb on + strand, within HP15_961 at 976.797 kb on + strand at 976.798 kb on + strand at 976.832 kb on - strand at 976.856 kb on + strand at 976.864 kb on - strand at 976.871 kb on - strand at 976.876 kb on - strand at 976.896 kb on - strand at 976.925 kb on + strand at 976.925 kb on + strand at 977.011 kb on - strand at 977.033 kb on + strand at 977.033 kb on + strand at 977.033 kb on + strand at 977.033 kb on + strand at 977.033 kb on + strand at 977.033 kb on + strand at 977.033 kb on + strand at 977.033 kb on + strand at 977.041 kb on - strand at 977.041 kb on - strand at 977.041 kb on - strand at 977.048 kb on + strand at 977.084 kb on + strand at 977.092 kb on - strand at 977.106 kb on + strand at 977.198 kb on - strand at 977.224 kb on + strand at 977.296 kb on + strand at 977.332 kb on + strand at 977.377 kb on + strand at 977.715 kb on + strand at 977.723 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea as (N) remove 975,588 - -0.7 975,607 - -1.7 975,622 + +2.0 975,622 + -0.6 975,655 + +1.5 975,769 + -0.1 975,795 - +1.6 975,798 + +1.8 975,798 + -0.5 975,798 + -0.1 975,798 + +0.3 975,806 - -0.5 975,822 + +1.9 975,979 + -0.7 975,980 + -0.2 975,980 + +1.8 975,988 - -2.7 976,014 + +0.5 976,017 - +1.9 976,070 + HP15_960 0.20 +1.9 976,124 + HP15_960 0.31 -0.4 976,130 - HP15_960 0.33 +0.1 976,207 + HP15_960 0.48 -0.4 976,233 + HP15_960 0.54 -0.1 976,328 - HP15_960 0.73 -0.3 976,450 + +2.4 976,505 + +1.8 976,596 + -0.7 976,641 + HP15_961 0.37 -0.4 976,689 + HP15_961 0.70 -0.3 976,797 + -0.7 976,798 + +2.0 976,832 - +1.9 976,856 + -0.7 976,864 - -1.2 976,871 - -0.4 976,876 - -0.0 976,896 - -0.2 976,925 + +1.9 976,925 + +2.5 977,011 - -0.3 977,033 + -0.1 977,033 + +1.5 977,033 + -1.1 977,033 + +0.5 977,033 + -0.3 977,033 + -0.9 977,033 + +0.1 977,033 + -0.2 977,041 - +1.2 977,041 - -0.8 977,041 - +0.7 977,048 + -0.1 977,084 + -0.5 977,092 - +0.5 977,106 + +0.7 977,198 - +0.3 977,224 + -0.7 977,296 + -0.4 977,332 + +0.8 977,377 + -0.4 977,715 + -1.0 977,723 - -0.8
Or see this region's nucleotide sequence