Strain Fitness in Marinobacter adhaerens HP15 around HP15_448

Experiment: Urea as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_447 and HP15_448 overlap by 4 nucleotidesHP15_448 and HP15_449 are separated by 47 nucleotides HP15_447: HP15_447 - glycosyltransferase, at 451,273 to 452,388 _447 HP15_448: HP15_448 - protein containing DUF1022, at 452,385 to 453,380 _448 HP15_449: HP15_449 - lipid A biosynthesis lauroyl acyltransferase, at 453,428 to 454,375 _449 Position (kb) 452 453 454Strain fitness (log2 ratio) -1 0 1 2at 451.424 kb on - strand, within HP15_447at 451.558 kb on - strand, within HP15_447at 451.650 kb on - strand, within HP15_447at 451.673 kb on + strand, within HP15_447at 451.695 kb on + strand, within HP15_447at 451.710 kb on + strand, within HP15_447at 451.718 kb on - strand, within HP15_447at 451.894 kb on + strand, within HP15_447at 451.998 kb on - strand, within HP15_447at 452.020 kb on + strand, within HP15_447at 452.139 kb on - strand, within HP15_447at 452.326 kb on + strandat 452.351 kb on + strandat 453.378 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea as (N)
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451,424 - HP15_447 0.14 +2.0
451,558 - HP15_447 0.26 +2.2
451,650 - HP15_447 0.34 -0.9
451,673 + HP15_447 0.36 +2.0
451,695 + HP15_447 0.38 +0.3
451,710 + HP15_447 0.39 -1.3
451,718 - HP15_447 0.40 +0.5
451,894 + HP15_447 0.56 +2.1
451,998 - HP15_447 0.65 -0.3
452,020 + HP15_447 0.67 -0.2
452,139 - HP15_447 0.78 -0.0
452,326 + +0.6
452,351 + +0.0
453,378 - +1.7

Or see this region's nucleotide sequence