Strain Fitness in Marinobacter adhaerens HP15 around HP15_3270

Experiment: Urea as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3269 and HP15_3270 are separated by 860 nucleotidesHP15_3270 and HP15_3271 are separated by 113 nucleotides HP15_3269: HP15_3269 - membrane protein containing ATP-binding region, ATPase-like domains, at 3,425,853 to 3,427,319 _3269 HP15_3270: HP15_3270 - OmpA/MotB domain protein, at 3,428,180 to 3,429,439 _3270 HP15_3271: HP15_3271 - aspartate aminotransferase, at 3,429,553 to 3,430,848 _3271 Position (kb) 3428 3429 3430Strain fitness (log2 ratio) -2 -1 0 1 2at 3427.260 kb on + strandat 3427.393 kb on + strandat 3427.401 kb on - strandat 3427.480 kb on - strandat 3427.507 kb on - strandat 3427.521 kb on - strandat 3427.555 kb on + strandat 3427.582 kb on - strandat 3427.648 kb on + strandat 3427.769 kb on - strandat 3427.771 kb on + strandat 3427.874 kb on + strandat 3427.961 kb on + strandat 3427.969 kb on - strandat 3427.971 kb on + strandat 3427.979 kb on - strandat 3427.993 kb on - strandat 3428.177 kb on + strandat 3428.243 kb on - strandat 3428.305 kb on + strandat 3428.350 kb on - strand, within HP15_3270at 3428.436 kb on - strand, within HP15_3270at 3428.485 kb on + strand, within HP15_3270at 3428.562 kb on - strand, within HP15_3270at 3428.609 kb on - strand, within HP15_3270at 3428.630 kb on - strand, within HP15_3270at 3428.632 kb on + strand, within HP15_3270at 3428.731 kb on + strand, within HP15_3270at 3428.833 kb on - strand, within HP15_3270at 3428.841 kb on - strand, within HP15_3270at 3428.880 kb on - strand, within HP15_3270at 3428.885 kb on - strand, within HP15_3270at 3428.963 kb on - strand, within HP15_3270at 3429.265 kb on - strand, within HP15_3270at 3429.328 kb on - strandat 3429.367 kb on - strandat 3429.370 kb on + strandat 3429.500 kb on + strandat 3429.609 kb on + strandat 3429.648 kb on + strandat 3429.648 kb on + strandat 3429.736 kb on - strand, within HP15_3271at 3429.775 kb on + strand, within HP15_3271at 3429.874 kb on - strand, within HP15_3271at 3430.104 kb on + strand, within HP15_3271at 3430.170 kb on + strand, within HP15_3271at 3430.187 kb on - strand, within HP15_3271at 3430.191 kb on + strand, within HP15_3271at 3430.261 kb on - strand, within HP15_3271at 3430.370 kb on - strand, within HP15_3271

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea as (N)
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3,427,260 + -0.2
3,427,393 + +0.3
3,427,401 - +0.4
3,427,480 - +0.0
3,427,507 - +0.1
3,427,521 - +1.1
3,427,555 + +0.3
3,427,582 - -0.4
3,427,648 + +1.5
3,427,769 - -0.9
3,427,771 + -1.0
3,427,874 + +1.7
3,427,961 + -1.2
3,427,969 - +0.0
3,427,971 + -0.8
3,427,979 - -0.8
3,427,993 - -0.0
3,428,177 + -0.2
3,428,243 - +1.6
3,428,305 + -0.4
3,428,350 - HP15_3270 0.13 -1.3
3,428,436 - HP15_3270 0.20 +0.4
3,428,485 + HP15_3270 0.24 +1.0
3,428,562 - HP15_3270 0.30 -0.4
3,428,609 - HP15_3270 0.34 -0.2
3,428,630 - HP15_3270 0.36 +1.8
3,428,632 + HP15_3270 0.36 -0.4
3,428,731 + HP15_3270 0.44 -0.3
3,428,833 - HP15_3270 0.52 +2.0
3,428,841 - HP15_3270 0.52 +2.7
3,428,880 - HP15_3270 0.56 +2.1
3,428,885 - HP15_3270 0.56 +1.4
3,428,963 - HP15_3270 0.62 -0.5
3,429,265 - HP15_3270 0.86 +1.6
3,429,328 - +1.8
3,429,367 - -0.9
3,429,370 + +2.0
3,429,500 + -0.8
3,429,609 + -0.1
3,429,648 + -0.3
3,429,648 + -1.3
3,429,736 - HP15_3271 0.14 -0.1
3,429,775 + HP15_3271 0.17 -0.6
3,429,874 - HP15_3271 0.25 -1.8
3,430,104 + HP15_3271 0.43 +2.5
3,430,170 + HP15_3271 0.48 -0.6
3,430,187 - HP15_3271 0.49 +1.6
3,430,191 + HP15_3271 0.49 +2.3
3,430,261 - HP15_3271 0.55 -0.7
3,430,370 - HP15_3271 0.63 -1.1

Or see this region's nucleotide sequence