Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13760

Experiment: m.b. nitrate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrate 50 mM
1,419,449	+		PGA1_c13740	0.56	-0.8
1,419,452	-		PGA1_c13740	0.57	-0.2
1,419,477	-		PGA1_c13740	0.58	-1.3
1,419,492	+		PGA1_c13740	0.59	+0.8
1,419,492	+		PGA1_c13740	0.59	-0.1
1,419,495	-		PGA1_c13740	0.59	+0.3
1,419,500	-		PGA1_c13740	0.60	-0.1
1,419,501	-		PGA1_c13740	0.60	+0.5
1,419,532	+		PGA1_c13740	0.62	-0.1
1,419,642	-		PGA1_c13740	0.68	+1.2
1,419,653	-		PGA1_c13740	0.69	-0.1
1,419,704	+		PGA1_c13740	0.72	+0.7
1,419,710	-		PGA1_c13740	0.73	+0.2
1,419,717	-		PGA1_c13740	0.73	+0.3
1,419,768	+		PGA1_c13740	0.76	+0.9
1,419,776	-		PGA1_c13740	0.77	-1.6
1,419,807	+		PGA1_c13740	0.79	-0.1
1,419,815	-		PGA1_c13740	0.79	+0.4
1,419,815	-		PGA1_c13740	0.79	+0.4
1,419,817	+		PGA1_c13740	0.79	+0.4
1,419,839	+		PGA1_c13740	0.81	-0.4
1,419,908	+		PGA1_c13740	0.85	+1.4
1,419,908	+		PGA1_c13740	0.85	-1.1
1,419,908	+		PGA1_c13740	0.85	+0.8
1,419,908	+		PGA1_c13740	0.85	+0.3
1,419,908	+		PGA1_c13740	0.85	-1.1
1,419,908	+		PGA1_c13740	0.85	+1.0
1,419,908	+		PGA1_c13740	0.85	-0.9
1,419,908	+		PGA1_c13740	0.85	+0.6
1,419,916	-		PGA1_c13740	0.86	+0.4
1,419,916	-		PGA1_c13740	0.86	+1.4
1,419,916	-		PGA1_c13740	0.86	+1.4
1,419,916	-		PGA1_c13740	0.86	+1.0
1,419,916	-		PGA1_c13740	0.86	+1.1
1,419,916	-		PGA1_c13740	0.86	-1.0
1,419,916	-		PGA1_c13740	0.86	-0.3
1,419,916	-		PGA1_c13740	0.86	-1.0
1,419,916	-		PGA1_c13740	0.86	+0.4
1,419,916	-		PGA1_c13740	0.86	-1.1
1,419,916	-		PGA1_c13740	0.86	+0.8
1,419,916	-		PGA1_c13740	0.86	+0.4
1,419,916	-		PGA1_c13740	0.86	-0.4
1,419,918	+		PGA1_c13740	0.86	-0.1
1,419,926	-		PGA1_c13740	0.86	+0.2
1,419,926	-		PGA1_c13740	0.86	+0.3
1,419,926	-		PGA1_c13740	0.86	+0.3
1,419,926	-		PGA1_c13740	0.86	-1.6
1,419,926	-		PGA1_c13740	0.86	-0.3
1,419,926	-		PGA1_c13740	0.86	+0.1
1,419,926	-		PGA1_c13740	0.86	-0.2
1,420,007	-				+0.5
1,420,019	+				+0.3
1,420,134	-				-1.3
1,420,136	+				-0.3
1,420,138	-				-0.1
1,420,142	+				-0.8
1,420,152	+				-0.5
1,420,152	+				-1.1
1,420,152	+				-0.3
1,420,152	+				-1.2
1,420,152	+				-0.3
1,420,160	-				+1.0
1,420,165	-				-0.4
1,420,182	-				-1.5
1,420,182	-				+1.4
1,420,201	+				-0.1
1,420,201	+				+0.1
1,420,259	+		PGA1_c13750	0.28	+0.4
1,420,259	+		PGA1_c13750	0.28	-0.2
1,420,267	-		PGA1_c13750	0.31	-0.4
1,420,315	+		PGA1_c13750	0.50	+1.3
1,420,315	+		PGA1_c13750	0.50	-0.1
1,420,315	+		PGA1_c13750	0.50	+1.1
1,420,323	-		PGA1_c13750	0.53	-0.2
1,420,374	-		PGA1_c13750	0.72	-0.3
1,420,420	-		PGA1_c13750	0.89	+0.2
1,420,475	+				+0.6
1,420,475	+				+1.0
1,420,483	-				-0.6
1,420,483	-				+0.6
1,420,483	-				+0.6
1,420,522	+				-0.6
1,420,566	-				+0.0
1,420,582	+				+0.3
1,420,590	-				+1.3
1,420,620	+		PGA1_c13760	0.11	+0.7
1,420,620	+		PGA1_c13760	0.11	+0.5
1,420,620	+		PGA1_c13760	0.11	-1.8
1,420,628	-		PGA1_c13760	0.11	+0.2
1,420,628	-		PGA1_c13760	0.11	-0.1
1,420,628	-		PGA1_c13760	0.11	-0.4
1,420,674	-		PGA1_c13760	0.14	-1.2
1,420,686	+		PGA1_c13760	0.15	-0.1
1,420,686	-		PGA1_c13760	0.15	-0.1
1,420,715	+		PGA1_c13760	0.17	+0.5
1,420,717	-		PGA1_c13760	0.17	+2.2
1,420,773	-		PGA1_c13760	0.20	+2.9
1,420,781	+		PGA1_c13760	0.21	-0.4
1,420,781	+		PGA1_c13760	0.21	+0.7
1,420,781	-		PGA1_c13760	0.21	+0.9
1,420,782	+		PGA1_c13760	0.21	-0.4
1,420,791	+		PGA1_c13760	0.22	+0.2
1,420,792	-		PGA1_c13760	0.22	+0.4
1,420,829	-		PGA1_c13760	0.24	-0.4
1,420,867	+		PGA1_c13760	0.26	+0.4
1,420,893	+		PGA1_c13760	0.28	-2.4
1,420,918	-		PGA1_c13760	0.30	-0.3
1,420,941	-		PGA1_c13760	0.31	+0.6
1,420,964	+		PGA1_c13760	0.32	+0.8
1,420,972	-		PGA1_c13760	0.33	+0.3
1,420,972	-		PGA1_c13760	0.33	+0.3
1,420,974	+		PGA1_c13760	0.33	-0.4
1,420,974	+		PGA1_c13760	0.33	-0.1
1,420,974	+		PGA1_c13760	0.33	-1.0
1,420,982	-		PGA1_c13760	0.34	+0.2
1,420,982	-		PGA1_c13760	0.34	+0.1
1,420,982	-		PGA1_c13760	0.34	-0.6
1,420,982	-		PGA1_c13760	0.34	-0.3
1,420,982	-		PGA1_c13760	0.34	-0.3
1,420,982	-				-0.1
1,420,982	-		PGA1_c13760	0.34	-0.1
1,420,982	-		PGA1_c13760	0.34	+0.6
1,420,982	-		PGA1_c13760	0.34	+1.7
1,420,988	+		PGA1_c13760	0.34	-0.3
1,421,024	+		PGA1_c13760	0.36	-0.3
1,421,024	+		PGA1_c13760	0.36	-0.0
1,421,024	+		PGA1_c13760	0.36	+0.8
1,421,024	+		PGA1_c13760	0.36	-0.1
1,421,024	+		PGA1_c13760	0.36	+1.4
1,421,024	+		PGA1_c13760	0.36	+0.3
1,421,024	+		PGA1_c13760	0.36	-0.2
1,421,024	+		PGA1_c13760	0.36	+0.9
1,421,024	+		PGA1_c13760	0.36	+0.0
1,421,024	+		PGA1_c13760	0.36	+1.3
1,421,024	+		PGA1_c13760	0.36	+0.6
1,421,024	+		PGA1_c13760	0.36	-0.1
1,421,032	-		PGA1_c13760	0.37	-0.5
1,421,032	-		PGA1_c13760	0.37	+0.1
1,421,032	-		PGA1_c13760	0.37	+1.1
1,421,032	-		PGA1_c13760	0.37	-1.6
1,421,032	-		PGA1_c13760	0.37	+0.2
1,421,032	-		PGA1_c13760	0.37	+1.0
1,421,032	-		PGA1_c13760	0.37	-0.4
1,421,034	+		PGA1_c13760	0.37	-0.4
1,421,042	-		PGA1_c13760	0.37	-0.0
1,421,087	+		PGA1_c13760	0.40	+0.7
1,421,095	-		PGA1_c13760	0.41	+1.0
1,421,095	-		PGA1_c13760	0.41	+0.9
1,421,136	+		PGA1_c13760	0.43	+0.1
1,421,146	+		PGA1_c13760	0.44	+2.4
1,421,146	+		PGA1_c13760	0.44	-0.0
1,421,187	-		PGA1_c13760	0.46	-0.1
1,421,205	+		PGA1_c13760	0.47	+1.0
1,421,208	-		PGA1_c13760	0.48	+0.3
1,421,221	-		PGA1_c13760	0.48	+0.6
1,421,229	-		PGA1_c13760	0.49	+0.1
1,421,273	-		PGA1_c13760	0.52	+0.8
1,421,273	-		PGA1_c13760	0.52	-0.1
1,421,292	+		PGA1_c13760	0.53	-1.7
1,421,305	-		PGA1_c13760	0.54	+1.1
1,421,317	+		PGA1_c13760	0.54	+0.5
1,421,325	-		PGA1_c13760	0.55	+0.7
1,421,367	-		PGA1_c13760	0.58	-0.2
1,421,381	+		PGA1_c13760	0.58	-0.1
1,421,381	+		PGA1_c13760	0.58	+0.5
1,421,381	+		PGA1_c13760	0.58	+3.3
1,421,381	+		PGA1_c13760	0.58	-2.4
1,421,381	+		PGA1_c13760	0.58	+0.5
1,421,381	+		PGA1_c13760	0.58	+0.4
1,421,389	-		PGA1_c13760	0.59	-0.1
1,421,389	-		PGA1_c13760	0.59	-0.4
1,421,389	-		PGA1_c13760	0.59	-1.6
1,421,389	-		PGA1_c13760	0.59	+0.3
1,421,389	-		PGA1_c13760	0.59	+0.4
1,421,389	-		PGA1_c13760	0.59	-0.0
1,421,396	+		PGA1_c13760	0.59	-0.6
1,421,396	+		PGA1_c13760	0.59	-0.5
1,421,396	+		PGA1_c13760	0.59	-1.4
1,421,396	+		PGA1_c13760	0.59	-0.3
1,421,404	-		PGA1_c13760	0.60	+0.8
1,421,404	-		PGA1_c13760	0.60	+0.9
1,421,422	-		PGA1_c13760	0.61	-2.1
1,421,486	-		PGA1_c13760	0.65	+0.0
1,421,489	+		PGA1_c13760	0.65	+2.0
1,421,520	+		PGA1_c13760	0.67	-0.0
1,421,535	+		PGA1_c13760	0.68	-1.3
1,421,541	-		PGA1_c13760	0.68	+2.3
1,421,563	+		PGA1_c13760	0.70	+0.2
1,421,621	+		PGA1_c13760	0.73	+0.3
1,421,631	-		PGA1_c13760	0.74	-0.5
1,421,633	+		PGA1_c13760	0.74	-1.8
1,421,638	+		PGA1_c13760	0.74	+0.8
1,421,641	-		PGA1_c13760	0.75	+0.4
1,421,641	-		PGA1_c13760	0.75	-0.5
1,421,651	-		PGA1_c13760	0.75	+0.2
1,421,656	+		PGA1_c13760	0.76	-0.3
1,421,656	-		PGA1_c13760	0.76	+1.0
1,421,666	-		PGA1_c13760	0.76	+0.6
1,421,679	-		PGA1_c13760	0.77	+0.3
1,421,715	+		PGA1_c13760	0.79	-0.4
1,421,722	-		PGA1_c13760	0.80	+0.6
1,421,753	+		PGA1_c13760	0.82	-0.1
1,421,761	-		PGA1_c13760	0.82	-1.7
1,421,818	+		PGA1_c13760	0.86	+0.9
1,421,926	+				+0.7
1,421,954	+				+0.4
1,422,033	+				-1.6
1,422,041	-				-1.0
1,422,049	+				+0.2
1,422,049	+				-0.4
1,422,147	+				-0.1
1,422,164	+				+0.4
1,422,180	-				-1.4
1,422,212	+		PGA1_c13770	0.12	-0.0
1,422,220	-		PGA1_c13770	0.13	+0.3
1,422,344	-		PGA1_c13770	0.22	+0.0
1,422,378	-		PGA1_c13770	0.25	+1.3
1,422,395	-		PGA1_c13770	0.26	-0.7
1,422,437	+		PGA1_c13770	0.29	+0.6
1,422,469	+		PGA1_c13770	0.31	-0.5
1,422,516	+		PGA1_c13770	0.35	-1.8
1,422,527	+		PGA1_c13770	0.35	-0.7
1,422,626	+		PGA1_c13770	0.43	-0.9
1,422,669	+		PGA1_c13770	0.46	+0.3
1,422,679	+		PGA1_c13770	0.47	-0.9
1,422,679	+		PGA1_c13770	0.47	-0.0
1,422,697	-		PGA1_c13770	0.48	+1.2
1,422,702	-		PGA1_c13770	0.48	+0.1
1,422,734	+		PGA1_c13770	0.51	+0.1
1,422,742	-		PGA1_c13770	0.51	+0.2
1,422,763	-		PGA1_c13770	0.53	-0.9
1,422,822	-		PGA1_c13770	0.57	-2.1
1,422,824	+		PGA1_c13770	0.57	-0.9
1,422,928	-		PGA1_c13770	0.65	-0.4
1,422,936	-		PGA1_c13770	0.66	+0.8
1,422,946	-		PGA1_c13770	0.66	+0.4
1,422,955	+		PGA1_c13770	0.67	-0.1