Strain Fitness in Shewanella amazonensis SB2B around Sama_3555

Experiment: LB, microplate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, microplate
4,188,398	+		Sama_3554	0.71	+0.3
4,188,398	+		Sama_3554	0.71	+0.3
4,188,398	+		Sama_3554	0.71	-0.0
4,188,398	+		Sama_3554	0.71	-0.7
4,188,398	+		Sama_3554	0.71	-0.4
4,188,398	+		Sama_3554	0.71	-0.0
4,188,398	+		Sama_3554	0.71	+0.8
4,188,399	-		Sama_3554	0.71	-0.7
4,188,402	+		Sama_3554	0.72	-1.3
4,188,421	+		Sama_3554	0.72	+1.0
4,188,421	+		Sama_3554	0.72	+0.4
4,188,421	+		Sama_3554	0.72	+1.6
4,188,422	-		Sama_3554	0.72	-0.8
4,188,422	-		Sama_3554	0.72	-1.3
4,188,422	-		Sama_3554	0.72	+0.5
4,188,422	-		Sama_3554	0.72	+0.9
4,188,422	-		Sama_3554	0.72	+0.9
4,188,436	-		Sama_3554	0.73	+0.7
4,188,463	+		Sama_3554	0.73	-0.1
4,188,463	+		Sama_3554	0.73	+1.1
4,188,463	+		Sama_3554	0.73	+0.2
4,188,463	+		Sama_3554	0.73	-0.0
4,188,463	+		Sama_3554	0.73	+2.3
4,188,463	+		Sama_3554	0.73	+0.6
4,188,463	+		Sama_3554	0.73	+0.7
4,188,463	+		Sama_3554	0.73	+0.6
4,188,463	+		Sama_3554	0.73	-0.3
4,188,463	+		Sama_3554	0.73	+1.3
4,188,463	+		Sama_3554	0.73	+1.5
4,188,463	+		Sama_3554	0.73	+1.3
4,188,463	+		Sama_3554	0.73	+2.8
4,188,463	+		Sama_3554	0.73	+0.0
4,188,464	-		Sama_3554	0.73	+0.7
4,188,464	-		Sama_3554	0.73	-1.5
4,188,464	-		Sama_3554	0.73	-1.4
4,188,464	-		Sama_3554	0.73	-1.0
4,188,467	+		Sama_3554	0.74	-0.4
4,188,467	+		Sama_3554	0.74	+0.3
4,188,467	+		Sama_3554	0.74	+0.8
4,188,468	-		Sama_3554	0.74	+1.3
4,188,468	-		Sama_3554	0.74	-0.4
4,188,468	-		Sama_3554	0.74	+1.6
4,188,489	+		Sama_3554	0.74	+0.8
4,188,489	+		Sama_3554	0.74	+0.0
4,188,490	-		Sama_3554	0.74	+1.5
4,188,517	+		Sama_3554	0.75	+2.3
4,188,517	+		Sama_3554	0.75	+0.9
4,188,517	+		Sama_3554	0.75	-0.2
4,188,517	+		Sama_3554	0.75	-0.9
4,188,517	+		Sama_3554	0.75	-0.2
4,188,518	-		Sama_3554	0.75	+0.3
4,188,518	-		Sama_3554	0.75	+1.4
4,188,518	-		Sama_3554	0.75	+0.1
4,188,518	-		Sama_3554	0.75	-1.7
4,188,521	+		Sama_3554	0.75	+0.8
4,188,521	+		Sama_3554	0.75	+0.3
4,188,521	+		Sama_3554	0.75	+1.6
4,188,521	+		Sama_3554	0.75	-0.6
4,188,521	+		Sama_3554	0.75	+0.1
4,188,521	+		Sama_3554	0.75	+0.7
4,188,521	+		Sama_3554	0.75	-2.0
4,188,521	+		Sama_3554	0.75	-1.3
4,188,521	+		Sama_3554	0.75	+0.3
4,188,521	+		Sama_3554	0.75	-0.7
4,188,521	+		Sama_3554	0.75	-0.7
4,188,521	+		Sama_3554	0.75	+0.3
4,188,521	+		Sama_3554	0.75	+3.1
4,188,521	+		Sama_3554	0.75	-0.7
4,188,521	+		Sama_3554	0.75	+0.3
4,188,521	+		Sama_3554	0.75	+0.9
4,188,521	+		Sama_3554	0.75	+1.6
4,188,521	+		Sama_3554	0.75	+1.2
4,188,521	+		Sama_3554	0.75	+1.2
4,188,521	+		Sama_3554	0.75	+1.3
4,188,522	-		Sama_3554	0.75	+1.2
4,188,522	-		Sama_3554	0.75	-0.9
4,188,522	-		Sama_3554	0.75	+0.4
4,188,522	-		Sama_3554	0.75	-0.3
4,188,522	-		Sama_3554	0.75	-0.3
4,188,522	-		Sama_3554	0.75	+0.3
4,188,522	-		Sama_3554	0.75	+0.8
4,188,522	-		Sama_3554	0.75	-0.6
4,188,652	+		Sama_3554	0.79	+0.1
4,188,652	+		Sama_3554	0.79	+1.9
4,188,701	+		Sama_3554	0.81	+0.8
4,188,701	+		Sama_3554	0.81	+1.3
4,188,701	+		Sama_3554	0.81	+0.3
4,188,740	-		Sama_3554	0.82	+1.8
4,188,740	-		Sama_3554	0.82	+1.7
4,188,740	-		Sama_3554	0.82	+1.0
4,188,740	-		Sama_3554	0.82	+0.7
4,188,778	+		Sama_3554	0.83	+1.0
4,188,778	+		Sama_3554	0.83	+0.3
4,188,778	+		Sama_3554	0.83	+0.3
4,188,779	-		Sama_3554	0.84	-0.7
4,188,779	-		Sama_3554	0.84	+0.3
4,188,823	+		Sama_3554	0.85	+1.1
4,188,981	+		Sama_3554	0.90	+1.9
4,188,982	-		Sama_3554	0.90	+0.3
4,188,982	-		Sama_3554	0.90	+1.9
4,189,003	+				+0.0
4,189,003	+				+2.1
4,189,004	-				-1.3
4,189,004	-				+0.4
4,189,006	+				+0.6
4,189,006	+				+1.0
4,189,006	+				+0.4
4,189,006	+				+0.9
4,189,007	-				+1.2
4,189,007	-				+1.2
4,189,007	-				+0.3
4,189,007	-				-0.7
4,189,007	-				-0.2
4,189,007	-				-1.0
4,189,050	+				+0.7
4,189,050	+				+1.9
4,189,050	+				+0.4
4,189,050	+				-0.1
4,189,116	+				+0.5
4,189,116	+				-1.3
4,189,122	+				+2.3
4,189,154	+				-0.1
4,189,154	+				+1.6
4,189,154	+				-0.1
4,189,154	+				+0.3
4,189,154	+				+0.6
4,189,154	+				+0.3
4,189,155	-				+1.4
4,189,155	-				-0.1
4,189,155	-				+1.3
4,189,155	-				+0.1
4,189,158	+				+1.3
4,189,176	+				+1.0
4,189,177	-				-0.3
4,189,240	-				-0.3
4,189,315	+				+0.7
4,189,315	+				+2.3
4,189,352	+				-0.8
4,189,352	+				+1.2
4,189,353	-				-1.2
4,189,355	+				-0.4
4,189,356	-				+0.4
4,189,367	+				+0.5
4,189,367	+				-0.1
4,189,369	+				+2.9
4,189,369	+				-0.6
4,189,369	+				+1.9
4,189,369	+				-0.5
4,189,369	+				+1.0
4,189,369	+				-1.3
4,189,369	+				-0.7
4,189,369	+				+0.3
4,189,369	+				-0.0
4,189,369	+				+0.2
4,189,369	+				-0.3
4,189,369	+				-0.1
4,189,369	+				+0.6
4,189,369	+				+1.1
4,189,370	-				-0.4
4,189,370	-				+1.5
4,189,370	-				-1.4
4,189,370	-				+0.9
4,189,370	-				+0.5
4,189,370	-				+1.8
4,189,370	-				+0.2
4,189,380	-				-0.7
4,189,380	-				-0.7
4,189,380	-				+0.4
4,189,380	-				+0.6
4,189,454	+		Sama_3555	0.24	+0.6
4,189,454	+		Sama_3555	0.24	+1.0
4,189,455	-		Sama_3555	0.24	+0.0
4,189,455	-		Sama_3555	0.24	-1.1
4,189,455	-		Sama_3555	0.24	+0.7
4,189,565	+		Sama_3555	0.61	-0.2
4,189,565	+		Sama_3555	0.61	-0.3
4,189,565	+		Sama_3555	0.61	-0.2
4,189,566	-		Sama_3555	0.61	-1.3
4,189,566	-		Sama_3555	0.61	-0.4
4,189,566	-		Sama_3555	0.61	-0.2
4,189,566	-		Sama_3555	0.61	+0.8
4,189,566	-		Sama_3555	0.61	+0.7
4,189,566	-		Sama_3555	0.61	-0.9
4,189,566	-		Sama_3555	0.61	-0.1
4,189,566	-		Sama_3555	0.61	+0.3
4,189,566	-		Sama_3555	0.61	+0.3
4,189,583	-		Sama_3555	0.67	+0.3
4,189,583	-		Sama_3555	0.67	+0.5
4,189,583	-		Sama_3555	0.67	-0.5
4,189,668	-				+1.8
4,189,674	+				+0.6
4,189,675	-				-1.2
4,189,716	-				+0.3
4,189,770	+				-1.0
4,189,770	+				+0.3
4,189,771	-				+0.1
4,189,771	-				+0.3
4,189,771	-				+0.1
4,189,930	-				+0.0
4,189,930	-				+0.5
4,189,952	+				-1.7
4,189,953	-				+0.5
4,189,953	-				+0.2
4,189,990	+				-0.1
4,189,990	+				+1.3
4,189,990	+				-0.3
4,189,990	+				-0.2
4,189,990	+				-0.7
4,189,991	-				-0.7
4,189,991	-				+0.3
4,189,991	-				+0.5
4,189,991	-				-0.7
4,189,991	-				+0.3
4,189,991	-				-2.5
4,189,991	-				+0.3
4,190,095	+				+1.6
4,190,144	+				+0.3
4,190,144	+				+0.0
4,190,145	-				-0.9
4,190,145	-				-0.1
4,190,164	+				-0.7
4,190,165	-				-1.2
4,190,165	-				+1.8
4,190,165	-				+0.6
4,190,186	-				+0.3
4,190,186	-				+0.3
4,190,186	-				+0.2
4,190,186	-				+0.4
4,190,208	+				-0.2
4,190,208	+				+0.8
4,190,208	+				-0.5
4,190,208	+				-0.6
4,190,209	-				+1.2
4,190,209	-				+0.5
4,190,209	-				-0.1
4,190,209	-				+0.3
4,190,250	+				-0.2
4,190,251	-				+0.4
4,190,290	-				+0.5
4,190,328	+				+0.1
4,190,382	+		Sama_3556	0.14	+0.3
4,190,394	+		Sama_3556	0.16	+0.7
4,190,457	+		Sama_3556	0.22	+1.5
4,190,458	-		Sama_3556	0.22	+1.3
4,190,458	-		Sama_3556	0.22	+1.0
4,190,458	-		Sama_3556	0.22	+0.2
4,190,458	-		Sama_3556	0.22	-2.9
4,190,489	+		Sama_3556	0.25	+1.9
4,190,490	-		Sama_3556	0.25	-0.5
4,190,500	+		Sama_3556	0.26	-2.0
4,190,501	-		Sama_3556	0.26	-0.7
4,190,611	+		Sama_3556	0.37	-0.4