Strain Fitness in Shewanella amazonensis SB2B around Sama_0997

Experiment: LB, microplate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, microplate
1,208,343	+				-0.9
1,208,343	+				-2.1
1,208,344	-				-1.8
1,208,346	+				-0.0
1,208,346	+				+0.9
1,208,347	-				+1.7
1,208,372	+				-0.1
1,208,372	+				+1.2
1,208,372	+				-0.2
1,208,373	-				+1.4
1,208,382	+				-0.9
1,208,405	+				+0.9
1,208,415	+				+0.9
1,208,419	+				-0.6
1,208,425	+				+1.5
1,208,425	+				+0.7
1,208,425	+				+1.2
1,208,426	-				+0.2
1,208,426	-				-0.1
1,208,426	-				-0.1
1,208,426	-				-0.8
1,208,429	-				-2.0
1,208,439	+				-1.4
1,208,449	+				+0.2
1,208,449	+				+0.3
1,208,449	+				-0.1
1,208,449	+				-0.7
1,208,449	+				+1.5
1,208,449	+				-0.3
1,208,449	+				+0.1
1,208,449	+				+0.9
1,208,450	-				-0.1
1,208,450	-				+0.3
1,208,450	-				-0.1
1,208,484	+				-0.9
1,208,502	+				+1.1
1,208,503	-				-0.1
1,208,503	-				+0.0
1,208,503	-				+0.4
1,208,506	-				-0.1
1,208,513	-				-0.2
1,208,518	+				+0.3
1,208,518	+				+0.1
1,208,518	+				-0.5
1,208,524	+				-1.7
1,208,524	+				+1.3
1,208,525	-				-0.2
1,208,566	+				-0.4
1,208,567	-				+1.0
1,208,580	+				+0.8
1,208,580	+				+1.9
1,208,587	-				-0.1
1,208,591	+				+0.6
1,208,591	+				+1.5
1,208,591	+				-0.3
1,208,610	-				-0.7
1,208,610	-				-0.3
1,208,691	-				+0.9
1,208,725	-		Sama_0996	0.13	-0.7
1,208,725	-		Sama_0996	0.13	+0.7
1,208,782	-		Sama_0996	0.21	-0.3
1,208,830	-		Sama_0996	0.28	+0.5
1,208,833	+		Sama_0996	0.28	+1.4
1,208,833	+		Sama_0996	0.28	+0.2
1,208,833	+		Sama_0996	0.28	+0.0
1,208,834	-		Sama_0996	0.28	+1.8
1,208,834	-		Sama_0996	0.28	+0.2
1,208,834	-		Sama_0996	0.28	-0.3
1,208,834	-		Sama_0996	0.28	-1.7
1,208,834	-		Sama_0996	0.28	+1.0
1,208,834	-		Sama_0996	0.28	-1.1
1,208,834	-		Sama_0996	0.28	+0.9
1,208,834	-		Sama_0996	0.28	+0.2
1,208,889	-		Sama_0996	0.36	+0.9
1,208,922	+		Sama_0996	0.41	+0.3
1,208,923	-		Sama_0996	0.41	+1.5
1,208,923	-		Sama_0996	0.41	+1.3
1,208,948	+		Sama_0996	0.44	-2.4
1,208,949	-		Sama_0996	0.45	-0.5
1,208,949	-		Sama_0996	0.45	+0.1
1,209,013	+		Sama_0996	0.54	+0.3
1,209,013	+		Sama_0996	0.54	+0.9
1,209,013	+		Sama_0996	0.54	+0.5
1,209,014	-		Sama_0996	0.54	-0.1
1,209,076	+		Sama_0996	0.63	+0.2
1,209,076	+		Sama_0996	0.63	+0.3
1,209,076	+		Sama_0996	0.63	-0.1
1,209,085	+		Sama_0996	0.64	+0.6
1,209,085	+		Sama_0996	0.64	+0.9
1,209,085	+		Sama_0996	0.64	+2.8
1,209,086	-		Sama_0996	0.64	-0.1
1,209,220	+		Sama_0996	0.83	-0.7
1,209,220	+		Sama_0996	0.83	-0.7
1,209,221	-		Sama_0996	0.83	+1.5
1,209,221	-		Sama_0996	0.83	-1.8
1,209,221	-		Sama_0996	0.83	+0.7
1,209,221	-		Sama_0996	0.83	-0.4
1,209,232	+		Sama_0996	0.85	-0.1
1,209,241	+		Sama_0996	0.86	-0.6
1,209,284	+				+0.7
1,209,284	+				-0.4
1,209,337	+				+0.3
1,209,337	+				+0.9
1,209,338	-				+2.5
1,209,338	-				-1.1
1,209,338	-				+0.5
1,209,361	-				+0.9
1,209,367	+				-0.2
1,209,367	+				+1.6
1,209,367	+				-0.3
1,209,368	-				-0.8
1,209,368	-				-0.4
1,209,368	-				+1.3
1,209,368	-				-0.9
1,209,368	-				-0.2
1,209,368	-				-0.4
1,209,368	-				+0.9
1,209,463	+		Sama_0997	0.17	-1.4
1,209,463	+		Sama_0997	0.17	-1.9
1,209,464	-		Sama_0997	0.17	-1.5
1,209,464	-		Sama_0997	0.17	+0.4
1,209,464	-		Sama_0997	0.17	+0.0
1,209,464	-		Sama_0997	0.17	-1.4
1,209,464	-		Sama_0997	0.17	-0.4
1,209,587	+		Sama_0997	0.32	+0.3
1,209,588	-		Sama_0997	0.32	+1.5
1,209,588	-		Sama_0997	0.32	-2.1
1,209,588	-		Sama_0997	0.32	+0.2
1,209,588	-		Sama_0997	0.32	-0.2
1,209,629	-		Sama_0997	0.37	-2.1
1,209,656	+		Sama_0997	0.40	-0.6
1,209,656	+		Sama_0997	0.40	-0.7
1,209,656	+		Sama_0997	0.40	+0.3
1,209,657	-		Sama_0997	0.40	+0.2
1,209,680	+		Sama_0997	0.43	-0.6
1,209,804	+		Sama_0997	0.57	+0.5
1,209,804	+		Sama_0997	0.57	+1.9
1,209,804	+		Sama_0997	0.57	+1.7
1,209,805	-		Sama_0997	0.58	+0.3
1,209,805	-		Sama_0997	0.58	-1.2
1,209,860	+		Sama_0997	0.64	-0.5
1,209,861	-		Sama_0997	0.64	-1.7
1,209,861	-		Sama_0997	0.64	-0.7
1,209,917	-		Sama_0997	0.71	-0.1
1,210,011	+		Sama_0997	0.82	+0.9
1,210,047	-		Sama_0997	0.86	-0.1
1,210,062	+		Sama_0997	0.88	+0.1
1,210,063	-		Sama_0997	0.88	+0.5
1,210,063	-		Sama_0997	0.88	+1.9
1,210,063	-		Sama_0997	0.88	-0.4
1,210,088	+				+1.1
1,210,089	-				+0.6
1,210,089	-				+0.4
1,210,131	+				-0.2
1,210,132	-				-0.1
1,210,132	-				+0.3
1,210,132	-				+0.7
1,210,159	+				+0.8
1,210,160	-				+0.5
1,210,160	-				+0.5
1,210,173	-				-0.1
1,210,191	-				+0.6
1,210,191	-				+0.9
1,210,191	-				+0.9
1,210,191	-				-0.1
1,210,262	+				-0.1
1,210,262	+				+2.1
1,210,263	-				-0.1
1,210,263	-				+1.1
1,210,263	-				+1.4
1,210,263	-				-0.1
1,210,287	+		Sama_0998	0.12	+0.9
1,210,288	-		Sama_0998	0.12	+0.2
1,210,288	-		Sama_0998	0.12	-0.6
1,210,328	+		Sama_0998	0.16	+0.1
1,210,328	+		Sama_0998	0.16	+0.7
1,210,328	+		Sama_0998	0.16	+0.6
1,210,328	+		Sama_0998	0.16	-1.0
1,210,328	+		Sama_0998	0.16	+1.8
1,210,328	+		Sama_0998	0.16	-1.4
1,210,329	-		Sama_0998	0.16	-0.0
1,210,436	+		Sama_0998	0.26	-0.3
1,210,436	+		Sama_0998	0.26	+0.9
1,210,437	-		Sama_0998	0.27	+0.2
1,210,437	-		Sama_0998	0.27	-0.5
1,210,437	-		Sama_0998	0.27	+1.9
1,210,476	+		Sama_0998	0.30	-2.3
1,210,476	+		Sama_0998	0.30	-0.1
1,210,476	+		Sama_0998	0.30	+0.2
1,210,476	+		Sama_0998	0.30	-0.1
1,210,476	+		Sama_0998	0.30	+0.3
1,210,476	+		Sama_0998	0.30	+1.1
1,210,476	+		Sama_0998	0.30	-0.1
1,210,477	-		Sama_0998	0.31	-0.5
1,210,477	-		Sama_0998	0.31	-1.7
1,210,477	-		Sama_0998	0.31	+1.3
1,210,477	-		Sama_0998	0.31	-0.3
1,210,477	-		Sama_0998	0.31	-0.1
1,210,477	-		Sama_0998	0.31	-0.5
1,210,477	-		Sama_0998	0.31	-0.7
1,210,477	-		Sama_0998	0.31	+0.7
1,210,480	+		Sama_0998	0.31	-0.1
1,210,480	+		Sama_0998	0.31	+0.1
1,210,480	+		Sama_0998	0.31	+0.5
1,210,481	-		Sama_0998	0.31	-0.1
1,210,481	-		Sama_0998	0.31	-0.3
1,210,519	-		Sama_0998	0.35	+0.8
1,210,526	-		Sama_0998	0.35	+0.1
1,210,631	+		Sama_0998	0.46	+1.8
1,210,631	+		Sama_0998	0.46	+0.8
1,210,631	+		Sama_0998	0.46	+0.9
1,210,631	+		Sama_0998	0.46	+0.2
1,210,632	-		Sama_0998	0.46	+0.1
1,210,632	-		Sama_0998	0.46	+0.1
1,210,632	-		Sama_0998	0.46	+0.5
1,210,675	-		Sama_0998	0.50	-0.1
1,210,675	-		Sama_0998	0.50	+0.6
1,210,768	+		Sama_0998	0.60	+1.0
1,210,768	+		Sama_0998	0.60	-0.1
1,210,769	-		Sama_0998	0.60	+0.1
1,210,769	-		Sama_0998	0.60	+0.9
1,210,769	-		Sama_0998	0.60	+1.9
1,210,770	+		Sama_0998	0.60	+0.0
1,210,787	+		Sama_0998	0.61	-0.1
1,210,787	+		Sama_0998	0.61	+1.2
1,210,788	-		Sama_0998	0.62	+0.9
1,210,788	-		Sama_0998	0.62	-0.0
1,210,868	+		Sama_0998	0.70	+1.6
1,210,868	+		Sama_0998	0.70	+1.8
1,210,869	-		Sama_0998	0.70	-0.4
1,210,885	-		Sama_0998	0.71	+0.6
1,210,885	-		Sama_0998	0.71	-1.1
1,210,912	+		Sama_0998	0.74	-0.7
1,210,913	-		Sama_0998	0.74	+1.5
1,210,941	-		Sama_0998	0.77	-0.1
1,210,974	+		Sama_0998	0.80	+2.7
1,210,974	+		Sama_0998	0.80	-1.0
1,210,975	-		Sama_0998	0.80	+0.6
1,210,975	-		Sama_0998	0.80	+0.9
1,210,975	-		Sama_0998	0.80	+0.6
1,210,975	-		Sama_0998	0.80	+0.9
1,211,079	+				+0.9
1,211,079	+				-0.8