Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25500

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,653,815	-		PGA1_c25490	0.23	-0.4
2,653,815	-		PGA1_c25490	0.23	+1.0
2,653,815	-		PGA1_c25490	0.23	-0.6
2,653,816	-		PGA1_c25490	0.23	-0.1
2,653,828	-		PGA1_c25490	0.24	-1.1
2,653,828	-		PGA1_c25490	0.24	-0.5
2,653,858	+		PGA1_c25490	0.26	-0.4
2,653,866	-		PGA1_c25490	0.27	-0.7
2,653,918	-		PGA1_c25490	0.31	-1.3
2,653,923	-		PGA1_c25490	0.31	+0.0
2,653,934	-		PGA1_c25490	0.32	+0.8
2,653,970	+		PGA1_c25490	0.35	-1.4
2,653,970	+		PGA1_c25490	0.35	-2.5
2,654,004	-		PGA1_c25490	0.38	-0.1
2,654,004	-		PGA1_c25490	0.38	+0.5
2,654,027	-		PGA1_c25490	0.39	-2.4
2,654,053	+		PGA1_c25490	0.41	+0.0
2,654,053	+		PGA1_c25490	0.41	+0.2
2,654,053	+		PGA1_c25490	0.41	-0.2
2,654,058	+		PGA1_c25490	0.42	+1.0
2,654,060	+		PGA1_c25490	0.42	-1.3
2,654,072	+		PGA1_c25490	0.43	+0.5
2,654,130	+		PGA1_c25490	0.48	-0.7
2,654,234	-		PGA1_c25490	0.56	+0.5
2,654,248	+		PGA1_c25490	0.57	-0.5
2,654,248	+		PGA1_c25490	0.57	-0.5
2,654,248	+		PGA1_c25490	0.57	-0.6
2,654,256	-		PGA1_c25490	0.58	-0.9
2,654,256	-		PGA1_c25490	0.58	+0.3
2,654,256	-		PGA1_c25490	0.58	-3.5
2,654,256	-		PGA1_c25490	0.58	-0.6
2,654,270	+		PGA1_c25490	0.59	+0.8
2,654,272	+		PGA1_c25490	0.59	-1.1
2,654,277	+		PGA1_c25490	0.59	-1.4
2,654,285	+		PGA1_c25490	0.60	-3.1
2,654,285	-		PGA1_c25490	0.60	-0.4
2,654,287	+		PGA1_c25490	0.60	-3.0
2,654,293	-		PGA1_c25490	0.60	-0.4
2,654,293	-		PGA1_c25490	0.60	+0.5
2,654,313	+		PGA1_c25490	0.62	-0.3
2,654,349	+		PGA1_c25490	0.65	+0.5
2,654,351	+		PGA1_c25490	0.65	-0.7
2,654,357	-		PGA1_c25490	0.65	-1.3
2,654,359	-		PGA1_c25490	0.66	-0.3
2,654,359	-		PGA1_c25490	0.66	+0.8
2,654,367	-		PGA1_c25490	0.66	+0.1
2,654,369	+		PGA1_c25490	0.66	-0.1
2,654,369	-		PGA1_c25490	0.66	-1.3
2,654,369	-		PGA1_c25490	0.66	+0.0
2,654,403	-		PGA1_c25490	0.69	-0.4
2,654,409	+		PGA1_c25490	0.70	-0.1
2,654,436	+		PGA1_c25490	0.72	+1.6
2,654,444	-		PGA1_c25490	0.72	-1.0
2,654,484	+		PGA1_c25490	0.76	-0.1
2,654,492	-		PGA1_c25490	0.76	-0.0
2,654,656	-		PGA1_c25490	0.89	-1.2
2,654,683	+				-0.7
2,654,691	-				+0.3
2,654,691	-				-0.8
2,654,704	+				+0.0
2,654,704	+				-0.1
2,654,704	+				-1.3
2,654,712	-				-0.9
2,654,712	-				+0.3
2,654,712	-				-0.9
2,654,715	-				-2.0
2,654,716	+				-1.0
2,654,716	+				-0.7
2,654,756	+				-0.1
2,654,756	+				-0.7
2,654,756	+				+0.2
2,654,764	-				-0.8
2,654,764	-				-1.6
2,654,764	-				+1.3
2,654,764	-				-0.0
2,654,764	-				+1.6
2,654,764	-				-0.2
2,654,764	-				+0.3
2,654,764	-				+0.3
2,654,764	-				-1.0
2,654,769	-				+2.9
2,654,810	+				+0.5
2,654,834	-				-0.9
2,654,845	-				+0.1
2,654,845	-				+2.7
2,654,845	-				+0.4
2,654,845	-				+0.6
2,654,845	-				-0.4
2,654,845	-				+0.8
2,654,851	+				+1.6
2,654,852	+				-0.1
2,654,852	+				+1.1
2,654,852	+				-0.7
2,654,860	+				-0.6
2,654,860	-				+0.2
2,654,885	+		PGA1_c25500	0.12	+0.2
2,654,893	-		PGA1_c25500	0.13	+0.4
2,654,901	+		PGA1_c25500	0.15	-2.7
2,654,906	+		PGA1_c25500	0.15	+1.6
2,654,926	-		PGA1_c25500	0.18	+0.4
2,654,933	-		PGA1_c25500	0.19	-0.2
2,654,933	-		PGA1_c25500	0.19	-0.9
2,654,957	+		PGA1_c25500	0.22	-2.0
2,654,957	+		PGA1_c25500	0.22	-1.8
2,654,957	+		PGA1_c25500	0.22	-1.1
2,654,957	+		PGA1_c25500	0.22	-1.2
2,654,957	+		PGA1_c25500	0.22	-0.1
2,654,957	+		PGA1_c25500	0.22	+0.2
2,654,957	+		PGA1_c25500	0.22	+0.0
2,654,965	-		PGA1_c25500	0.23	+0.8
2,654,965	-		PGA1_c25500	0.23	-0.7
2,654,965	-		PGA1_c25500	0.23	-0.6
2,654,965	-		PGA1_c25500	0.23	+0.3
2,654,965	-		PGA1_c25500	0.23	+0.6
2,654,965	-		PGA1_c25500	0.23	-0.2
2,654,965	-		PGA1_c25500	0.23	+0.6
2,654,970	-		PGA1_c25500	0.24	+0.1
2,654,999	+		PGA1_c25500	0.28	-0.5
2,655,105	+		PGA1_c25500	0.43	-1.2
2,655,250	-		PGA1_c25500	0.63	-0.9
2,655,255	-		PGA1_c25500	0.64	-1.7
2,655,315	+		PGA1_c25500	0.72	-0.7
2,655,368	-		PGA1_c25500	0.80	+0.1
2,655,385	+		PGA1_c25500	0.82	+0.6
2,655,411	+		PGA1_c25500	0.86	-0.3
2,655,427	-		PGA1_c25500	0.88	+0.1
2,655,444	+				+0.8
2,655,452	-				-1.6
2,655,452	-				-0.5
2,655,459	-				-0.4
2,655,466	-				+0.9
2,655,474	+				-1.7
2,655,505	-				-1.0
2,655,515	+				-0.3
2,655,516	-				-2.9
2,655,548	-				+0.3
2,655,587	-				-0.9
2,655,627	-				+0.6
2,655,632	-		PGA1_c25510	0.10	-0.3
2,655,633	-		PGA1_c25510	0.10	-3.0
2,655,636	+		PGA1_c25510	0.10	+0.2
2,655,643	-		PGA1_c25510	0.11	+0.6
2,655,643	-		PGA1_c25510	0.11	-0.7
2,655,646	+		PGA1_c25510	0.11	-0.5
2,655,670	+		PGA1_c25510	0.13	-0.1
2,655,692	+		PGA1_c25510	0.15	+0.1
2,655,692	+		PGA1_c25510	0.15	-0.0
2,655,748	+		PGA1_c25510	0.20	-2.0
2,655,748	+		PGA1_c25510	0.20	+0.6
2,655,748	+		PGA1_c25510	0.20	+0.5
2,655,748	+		PGA1_c25510	0.20	-0.1
2,655,748	+		PGA1_c25510	0.20	+1.0
2,655,748	+		PGA1_c25510	0.20	-1.5
2,655,748	+		PGA1_c25510	0.20	-0.5
2,655,748	+		PGA1_c25510	0.20	+0.2
2,655,748	+		PGA1_c25510	0.20	+0.4
2,655,748	+		PGA1_c25510	0.20	+0.8
2,655,748	+		PGA1_c25510	0.20	-0.9
2,655,748	+		PGA1_c25510	0.20	+1.0
2,655,748	+		PGA1_c25510	0.20	-1.5
2,655,748	+		PGA1_c25510	0.20	-1.9
2,655,748	+		PGA1_c25510	0.20	+0.4
2,655,748	+		PGA1_c25510	0.20	+0.9
2,655,748	+		PGA1_c25510	0.20	-0.1
2,655,748	+		PGA1_c25510	0.20	-0.6
2,655,748	+		PGA1_c25510	0.20	+0.3
2,655,748	+		PGA1_c25510	0.20	-0.9
2,655,748	+		PGA1_c25510	0.20	-0.5
2,655,748	+		PGA1_c25510	0.20	-0.3
2,655,748	+		PGA1_c25510	0.20	+0.9
2,655,748	+		PGA1_c25510	0.20	+0.9
2,655,748	+		PGA1_c25510	0.20	-0.7
2,655,748	+		PGA1_c25510	0.20	-3.1
2,655,748	+		PGA1_c25510	0.20	+0.5
2,655,748	+		PGA1_c25510	0.20	+0.7
2,655,748	+		PGA1_c25510	0.20	-0.3
2,655,748	+		PGA1_c25510	0.20	+0.7
2,655,748	+		PGA1_c25510	0.20	+1.5
2,655,748	+		PGA1_c25510	0.20	+0.6
2,655,748	+		PGA1_c25510	0.20	+1.1
2,655,748	+		PGA1_c25510	0.20	+0.0
2,655,748	+		PGA1_c25510	0.20	-0.6
2,655,748	+		PGA1_c25510	0.20	+0.2
2,655,748	+		PGA1_c25510	0.20	-0.1
2,655,748	+		PGA1_c25510	0.20	-0.3
2,655,748	+		PGA1_c25510	0.20	-0.2
2,655,748	+		PGA1_c25510	0.20	+0.6
2,655,748	+		PGA1_c25510	0.20	+0.6
2,655,748	+		PGA1_c25510	0.20	+0.1
2,655,748	+		PGA1_c25510	0.20	-0.2
2,655,748	+		PGA1_c25510	0.20	+0.5
2,655,748	+		PGA1_c25510	0.20	+1.3
2,655,748	+		PGA1_c25510	0.20	-1.4
2,655,748	+		PGA1_c25510	0.20	+1.5
2,655,748	+		PGA1_c25510	0.20	-0.7
2,655,748	+		PGA1_c25510	0.20	+0.3
2,655,748	+		PGA1_c25510	0.20	+0.1
2,655,748	+		PGA1_c25510	0.20	+0.0
2,655,748	+		PGA1_c25510	0.20	-0.2
2,655,748	+		PGA1_c25510	0.20	+1.8
2,655,753	+		PGA1_c25510	0.20	-1.3
2,655,753	+		PGA1_c25510	0.20	+0.5
2,655,753	+		PGA1_c25510	0.20	-0.2
2,655,753	+		PGA1_c25510	0.20	+0.3
2,655,756	-		PGA1_c25510	0.20	-0.4
2,655,756	-		PGA1_c25510	0.20	+0.2
2,655,756	-		PGA1_c25510	0.20	+1.0
2,655,756	-		PGA1_c25510	0.20	-0.3
2,655,756	-		PGA1_c25510	0.20	-1.1
2,655,756	-		PGA1_c25510	0.20	+1.0
2,655,756	-		PGA1_c25510	0.20	-0.1
2,655,756	-		PGA1_c25510	0.20	-0.0
2,655,756	-		PGA1_c25510	0.20	+0.3
2,655,756	-		PGA1_c25510	0.20	+0.2
2,655,756	-		PGA1_c25510	0.20	-0.6
2,655,756	-		PGA1_c25510	0.20	+0.6
2,655,756	-		PGA1_c25510	0.20	-1.2
2,655,756	-		PGA1_c25510	0.20	-0.3
2,655,756	-		PGA1_c25510	0.20	+3.8
2,655,756	-		PGA1_c25510	0.20	+0.3
2,655,756	-		PGA1_c25510	0.20	+0.1
2,655,756	-		PGA1_c25510	0.20	-1.0
2,655,756	-		PGA1_c25510	0.20	+0.6
2,655,756	-		PGA1_c25510	0.20	-0.9
2,655,756	-		PGA1_c25510	0.20	-2.5
2,655,756	-		PGA1_c25510	0.20	-0.4
2,655,756	-		PGA1_c25510	0.20	+0.3
2,655,756	-		PGA1_c25510	0.20	-1.0
2,655,756	-		PGA1_c25510	0.20	-1.1
2,655,756	-		PGA1_c25510	0.20	-1.3
2,655,756	-		PGA1_c25510	0.20	+0.5
2,655,756	-		PGA1_c25510	0.20	+1.9
2,655,756	-		PGA1_c25510	0.20	-0.2
2,655,756	-		PGA1_c25510	0.20	-0.4
2,655,756	-		PGA1_c25510	0.20	-0.0
2,655,756	-		PGA1_c25510	0.20	+0.3
2,655,756	-		PGA1_c25510	0.20	+0.6
2,655,756	-		PGA1_c25510	0.20	-0.7
2,655,756	-		PGA1_c25510	0.20	-1.0
2,655,756	-		PGA1_c25510	0.20	-0.5
2,655,756	-		PGA1_c25510	0.20	+0.0
2,655,756	-		PGA1_c25510	0.20	-1.7
2,655,756	-		PGA1_c25510	0.20	-0.6
2,655,756	-		PGA1_c25510	0.20	-2.5
2,655,756	-		PGA1_c25510	0.20	+1.0
2,655,756	-		PGA1_c25510	0.20	+1.0
2,655,756	-		PGA1_c25510	0.20	-0.2
2,655,756	-		PGA1_c25510	0.20	+0.8
2,655,756	-		PGA1_c25510	0.20	-1.5
2,655,756	-		PGA1_c25510	0.20	+0.0
2,655,756	-		PGA1_c25510	0.20	-0.9
2,655,756	-		PGA1_c25510	0.20	-0.8
2,655,756	-		PGA1_c25510	0.20	+1.3
2,655,756	-		PGA1_c25510	0.20	-0.7
2,655,756	-		PGA1_c25510	0.20	-3.0
2,655,756	-		PGA1_c25510	0.20	-0.5
2,655,756	-		PGA1_c25510	0.20	-0.6
2,655,756	-		PGA1_c25510	0.20	-0.9
2,655,756	-		PGA1_c25510	0.20	+1.1
2,655,758	-		PGA1_c25510	0.21	-0.3
2,655,761	-		PGA1_c25510	0.21	+0.9
2,655,761	-		PGA1_c25510	0.21	+1.5
2,655,761	-		PGA1_c25510	0.21	-1.7
2,655,761	-		PGA1_c25510	0.21	+1.1
2,655,877	-		PGA1_c25510	0.30	-0.6
2,655,877	-		PGA1_c25510	0.30	-0.3
2,655,879	-		PGA1_c25510	0.31	+0.9
2,655,959	+		PGA1_c25510	0.37	-0.1
2,655,959	+		PGA1_c25510	0.37	-0.2
2,655,959	+		PGA1_c25510	0.37	-0.1
2,655,994	+		PGA1_c25510	0.40	+0.8
2,656,021	-		PGA1_c25510	0.42	-1.4
2,656,037	+		PGA1_c25510	0.44	+0.7
2,656,037	+		PGA1_c25510	0.44	-1.8
2,656,037	+		PGA1_c25510	0.44	-1.0
2,656,045	-		PGA1_c25510	0.44	-1.0
2,656,045	-		PGA1_c25510	0.44	-2.2
2,656,116	+		PGA1_c25510	0.50	-0.6
2,656,237	-		PGA1_c25510	0.60	-0.4
2,656,258	-		PGA1_c25510	0.62	+0.6
2,656,301	+		PGA1_c25510	0.66	-0.6
2,656,309	-		PGA1_c25510	0.66	-0.7
2,656,397	-		PGA1_c25510	0.74	-0.8
2,656,397	-		PGA1_c25510	0.74	+1.8
2,656,405	-		PGA1_c25510	0.74	-1.2
2,656,418	-		PGA1_c25510	0.75	+0.9
2,656,428	-		PGA1_c25510	0.76	-0.5
2,656,440	+		PGA1_c25510	0.77	-1.2
2,656,443	-		PGA1_c25510	0.77	-0.7
2,656,468	+		PGA1_c25510	0.79	-0.8
2,656,468	+		PGA1_c25510	0.79	-0.3
2,656,468	+		PGA1_c25510	0.79	-1.1
2,656,468	-		PGA1_c25510	0.79	-0.4
2,656,474	-		PGA1_c25510	0.80	+0.0
2,656,476	-		PGA1_c25510	0.80	+0.2
2,656,476	-		PGA1_c25510	0.80	+0.4
2,656,476	-		PGA1_c25510	0.80	+0.3
2,656,476	-		PGA1_c25510	0.80	-1.1
2,656,504	+		PGA1_c25510	0.82	-2.0
2,656,504	+		PGA1_c25510	0.82	-0.4
2,656,504	+		PGA1_c25510	0.82	+0.5
2,656,510	-		PGA1_c25510	0.83	-0.1
2,656,512	-		PGA1_c25510	0.83	+0.2
2,656,512	-		PGA1_c25510	0.83	+0.2