Strain Fitness in Shewanella amazonensis SB2B around Sama_2997

Experiment: LB rep2 t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB rep2 t2
3,569,599	+		Sama_2996	0.52	-0.0
3,569,600	-		Sama_2996	0.52	+2.4
3,569,600	-		Sama_2996	0.52	-0.7
3,569,610	+		Sama_2996	0.52	+0.4
3,569,611	-		Sama_2996	0.52	+0.1
3,569,614	+		Sama_2996	0.52	+2.9
3,569,677	+		Sama_2996	0.56	-0.8
3,569,678	-		Sama_2996	0.56	+2.1
3,569,717	+		Sama_2996	0.58	+0.4
3,569,718	-		Sama_2996	0.58	+0.4
3,569,718	-		Sama_2996	0.58	-0.4
3,569,718	-		Sama_2996	0.58	+0.1
3,569,718	-		Sama_2996	0.58	-0.2
3,569,718	-		Sama_2996	0.58	-0.5
3,569,748	-		Sama_2996	0.59	-0.3
3,569,748	-		Sama_2996	0.59	-3.4
3,569,771	+		Sama_2996	0.61	-1.2
3,569,870	-		Sama_2996	0.66	+0.3
3,569,931	+		Sama_2996	0.69	-0.2
3,569,932	-		Sama_2996	0.69	+0.7
3,570,057	+		Sama_2996	0.76	-0.3
3,570,057	+		Sama_2996	0.76	+2.6
3,570,058	-		Sama_2996	0.76	+0.2
3,570,058	-		Sama_2996	0.76	-0.2
3,570,058	-		Sama_2996	0.76	+0.5
3,570,058	-		Sama_2996	0.76	-0.3
3,570,058	-		Sama_2996	0.76	-1.0
3,570,058	-		Sama_2996	0.76	+0.1
3,570,094	+		Sama_2996	0.78	-0.6
3,570,094	+		Sama_2996	0.78	-1.8
3,570,094	+		Sama_2996	0.78	+0.4
3,570,094	+		Sama_2996	0.78	+0.1
3,570,094	+		Sama_2996	0.78	+0.3
3,570,094	+		Sama_2996	0.78	+0.4
3,570,094	+		Sama_2996	0.78	-0.1
3,570,095	-		Sama_2996	0.78	-0.3
3,570,095	-		Sama_2996	0.78	+0.1
3,570,101	+		Sama_2996	0.78	+0.5
3,570,101	+		Sama_2996	0.78	+0.6
3,570,101	+		Sama_2996	0.78	-0.2
3,570,102	-		Sama_2996	0.78	-0.4
3,570,102	-		Sama_2996	0.78	+1.0
3,570,102	-		Sama_2996	0.78	+0.7
3,570,104	+		Sama_2996	0.78	+0.3
3,570,104	+		Sama_2996	0.78	+0.4
3,570,104	+		Sama_2996	0.78	+0.7
3,570,104	+		Sama_2996	0.78	+0.1
3,570,104	+		Sama_2996	0.78	+0.2
3,570,104	+		Sama_2996	0.78	+0.5
3,570,104	+		Sama_2996	0.78	+0.4
3,570,105	-		Sama_2996	0.78	-0.8
3,570,105	-		Sama_2996	0.78	-1.1
3,570,105	-		Sama_2996	0.78	+0.4
3,570,105	-		Sama_2996	0.78	-0.0
3,570,105	-		Sama_2996	0.78	-0.7
3,570,111	+		Sama_2996	0.79	-0.2
3,570,111	+		Sama_2996	0.79	+0.2
3,570,112	-		Sama_2996	0.79	+0.5
3,570,112	-		Sama_2996	0.79	+0.5
3,570,112	-		Sama_2996	0.79	+0.6
3,570,112	-		Sama_2996	0.79	+0.6
3,570,155	+		Sama_2996	0.81	+0.6
3,570,155	+		Sama_2996	0.81	-0.2
3,570,156	-		Sama_2996	0.81	-1.0
3,570,325	+		Sama_2996	0.90	+0.6
3,570,325	+		Sama_2996	0.90	-0.3
3,570,325	+		Sama_2996	0.90	+0.8
3,570,325	+		Sama_2996	0.90	+0.6
3,570,325	+		Sama_2996	0.90	+0.6
3,570,326	-		Sama_2996	0.90	+2.4
3,570,326	-		Sama_2996	0.90	-0.1
3,570,381	-				+0.2
3,570,381	-				+0.5
3,570,381	-				+0.8
3,570,381	-				-0.6
3,570,410	-				+0.1
3,570,414	+				+0.5
3,570,414	+				+0.3
3,570,415	-				+0.3
3,570,471	+				+0.1
3,570,471	+				-0.2
3,570,544	+				+0.8
3,570,544	+				-0.2
3,570,544	+				+0.0
3,570,544	+				+0.2
3,570,545	-				-1.6
3,570,545	-				-0.4
3,570,563	+				+1.1
3,570,564	-				+0.5
3,570,582	-				+0.2
3,570,593	+				+1.1
3,570,593	+				-0.1
3,570,593	+				-0.2
3,570,594	-				-3.0
3,570,594	-				-1.5
3,570,594	-				+1.5
3,570,594	-				-0.0
3,570,631	+		Sama_2997	0.12	+1.4
3,570,794	+		Sama_2997	0.49	-0.6
3,570,794	+		Sama_2997	0.49	-1.0
3,570,794	+		Sama_2997	0.49	-0.2
3,570,795	-		Sama_2997	0.49	-0.6
3,570,795	-		Sama_2997	0.49	-0.2
3,570,795	-		Sama_2997	0.49	-0.6
3,570,795	-		Sama_2997	0.49	-0.4
3,570,803	-		Sama_2997	0.51	-0.1
3,570,850	+		Sama_2997	0.61	+0.5
3,570,850	+		Sama_2997	0.61	+1.6
3,570,893	+		Sama_2997	0.71	-0.2
3,570,893	+		Sama_2997	0.71	-1.0
3,570,951	+		Sama_2997	0.84	-0.8
3,571,021	+				-0.2
3,571,021	+				+1.6
3,571,022	-				-2.7
3,571,022	-				-0.5
3,571,046	-				-1.2
3,571,046	-				+1.0
3,571,053	+				+0.2
3,571,053	+				-0.2
3,571,054	-				-0.4
3,571,054	-				+0.3
3,571,067	+				+0.5
3,571,067	+				-0.2
3,571,067	+				+0.2
3,571,067	+				+0.8
3,571,068	-				-0.6
3,571,068	-				-0.1
3,571,100	+				+0.9
3,571,122	-				+0.4
3,571,167	-				+0.6
3,571,167	-				+0.8
3,571,188	+				-0.4
3,571,188	+				+0.4
3,571,188	+				-0.1
3,571,189	-				-0.2
3,571,189	-				+0.1
3,571,189	-				+0.3
3,571,299	+				-0.4
3,571,313	+				+0.6
3,571,354	+		Sama_2998	0.11	+0.0
3,571,389	-		Sama_2998	0.13	-0.8
3,571,422	+		Sama_2998	0.15	+0.2
3,571,422	+		Sama_2998	0.15	+0.7
3,571,422	+		Sama_2998	0.15	+0.0
3,571,422	+		Sama_2998	0.15	-3.2
3,571,423	-		Sama_2998	0.15	-0.1
3,571,423	-		Sama_2998	0.15	-0.2
3,571,428	+		Sama_2998	0.16	-0.2
3,571,428	+		Sama_2998	0.16	-0.0
3,571,428	+		Sama_2998	0.16	+0.2
3,571,428	+		Sama_2998	0.16	+1.4
3,571,428	+		Sama_2998	0.16	-0.8
3,571,428	+		Sama_2998	0.16	+0.8
3,571,429	-		Sama_2998	0.16	+1.4
3,571,429	-		Sama_2998	0.16	+1.0
3,571,429	-		Sama_2998	0.16	+2.1
3,571,500	+		Sama_2998	0.20	-0.7
3,571,666	-		Sama_2998	0.30	-1.0
3,571,666	-		Sama_2998	0.30	+1.2
3,571,735	+		Sama_2998	0.34	+0.8
3,571,735	+		Sama_2998	0.34	+0.1
3,571,735	+		Sama_2998	0.34	-0.0
3,571,735	+		Sama_2998	0.34	-0.2
3,571,736	-		Sama_2998	0.34	-0.6
3,571,736	-		Sama_2998	0.34	-0.2
3,571,736	-		Sama_2998	0.34	-1.6
3,571,738	+		Sama_2998	0.34	-0.2
3,571,738	+		Sama_2998	0.34	+0.1
3,571,738	+		Sama_2998	0.34	+0.5
3,571,847	+		Sama_2998	0.40	-1.0
3,571,848	-		Sama_2998	0.40	-1.3
3,571,930	-		Sama_2998	0.45	+0.2
3,571,930	-		Sama_2998	0.45	+0.6
3,571,957	+		Sama_2998	0.47	+1.1
3,571,970	-		Sama_2998	0.48	-0.1
3,571,978	-		Sama_2998	0.48	-1.0