Strain Fitness in Shewanella amazonensis SB2B around Sama_2210

Experiment: LB rep2 t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB rep2 t2
2,670,185	-		Sama_2209	0.13	+0.6
2,670,258	+		Sama_2209	0.20	+0.7
2,670,258	+		Sama_2209	0.20	+1.2
2,670,258	+		Sama_2209	0.20	-0.1
2,670,258	+		Sama_2209	0.20	-0.0
2,670,259	-		Sama_2209	0.20	+0.3
2,670,259	-		Sama_2209	0.20	-0.2
2,670,259	-		Sama_2209	0.20	-0.7
2,670,260	+		Sama_2209	0.20	-0.4
2,670,260	+		Sama_2209	0.20	+0.8
2,670,260	+		Sama_2209	0.20	+0.8
2,670,261	-		Sama_2209	0.20	-0.6
2,670,261	-		Sama_2209	0.20	-0.1
2,670,261	-		Sama_2209	0.20	+1.0
2,670,261	-		Sama_2209	0.20	+0.0
2,670,261	-		Sama_2209	0.20	-1.6
2,670,271	+		Sama_2209	0.21	-0.4
2,670,272	-		Sama_2209	0.21	+1.3
2,670,272	-		Sama_2209	0.21	+0.6
2,670,334	+		Sama_2209	0.27	+0.8
2,670,334	+		Sama_2209	0.27	-1.2
2,670,334	+		Sama_2209	0.27	+2.0
2,670,334	+		Sama_2209	0.27	-0.2
2,670,335	-		Sama_2209	0.28	+2.5
2,670,335	-		Sama_2209	0.28	+0.8
2,670,476	+		Sama_2209	0.41	+0.7
2,670,476	+		Sama_2209	0.41	-0.2
2,670,476	+		Sama_2209	0.41	+0.6
2,670,476	+		Sama_2209	0.41	-0.0
2,670,476	+		Sama_2209	0.41	-1.5
2,670,477	-		Sama_2209	0.41	+0.1
2,670,477	-		Sama_2209	0.41	+0.4
2,670,507	+		Sama_2209	0.44	+1.3
2,670,719	+		Sama_2209	0.65	+0.3
2,670,719	+		Sama_2209	0.65	-1.2
2,670,723	+		Sama_2209	0.66	-2.2
2,670,723	+		Sama_2209	0.66	-0.2
2,670,723	+		Sama_2209	0.66	+0.0
2,670,724	-		Sama_2209	0.66	-1.0
2,670,724	-		Sama_2209	0.66	-1.5
2,670,724	-		Sama_2209	0.66	+0.4
2,670,724	-		Sama_2209	0.66	+0.3
2,670,724	-		Sama_2209	0.66	-0.4
2,670,724	-		Sama_2209	0.66	+1.3
2,670,724	-		Sama_2209	0.66	-0.4
2,670,738	+		Sama_2209	0.67	+1.1
2,670,739	-		Sama_2209	0.67	-0.2
2,670,745	+		Sama_2209	0.68	+0.3
2,670,745	+		Sama_2209	0.68	-0.2
2,670,745	+		Sama_2209	0.68	+2.2
2,670,746	-		Sama_2209	0.68	+0.1
2,670,746	-		Sama_2209	0.68	-0.7
2,670,746	-		Sama_2209	0.68	-0.4
2,670,786	+		Sama_2209	0.72	-0.4
2,670,786	+		Sama_2209	0.72	+1.2
2,670,787	-		Sama_2209	0.72	-0.7
2,670,787	-		Sama_2209	0.72	+0.5
2,670,787	-		Sama_2209	0.72	-0.7
2,670,788	+		Sama_2209	0.72	+0.0
2,670,788	+		Sama_2209	0.72	+0.3
2,670,788	+		Sama_2209	0.72	+1.4
2,670,788	+		Sama_2209	0.72	-1.6
2,670,788	+		Sama_2209	0.72	+0.7
2,670,788	+		Sama_2209	0.72	+0.0
2,670,788	+		Sama_2209	0.72	+0.1
2,670,788	+		Sama_2209	0.72	-1.1
2,670,788	+		Sama_2209	0.72	-0.5
2,670,788	+		Sama_2209	0.72	+0.3
2,670,788	+		Sama_2209	0.72	+1.2
2,670,788	+		Sama_2209	0.72	+0.5
2,670,788	+		Sama_2209	0.72	-0.2
2,670,788	+		Sama_2209	0.72	-0.7
2,670,788	+		Sama_2209	0.72	+0.5
2,670,788	+		Sama_2209	0.72	+0.0
2,670,788	+		Sama_2209	0.72	-0.1
2,670,788	+		Sama_2209	0.72	+0.5
2,670,789	-		Sama_2209	0.72	-0.2
2,670,789	-		Sama_2209	0.72	-0.2
2,670,789	-		Sama_2209	0.72	-0.2
2,670,789	-		Sama_2209	0.72	+0.8
2,670,789	-		Sama_2209	0.72	+0.8
2,670,789	-		Sama_2209	0.72	+0.0
2,670,987	-				-0.1
2,671,032	-				-0.7
2,671,108	+				-0.3
2,671,108	+				+0.6
2,671,108	+				+0.4
2,671,152	-				-0.1
2,671,207	+				-0.8
2,671,207	+				+0.2
2,671,211	+				-0.8
2,671,212	-				-1.2
2,671,220	+				+0.6
2,671,221	-				+0.2
2,671,221	-				+0.4
2,671,221	-				-1.0
2,671,243	+		Sama_2210	0.11	-0.6
2,671,243	+		Sama_2210	0.11	-0.4
2,671,274	+		Sama_2210	0.16	+0.6
2,671,274	+		Sama_2210	0.16	+1.3
2,671,275	-		Sama_2210	0.16	-0.2
2,671,275	-		Sama_2210	0.16	-0.8
2,671,347	+		Sama_2210	0.28	-0.7
2,671,442	+		Sama_2210	0.42	-0.1
2,671,455	+		Sama_2210	0.44	-0.4
2,671,455	+		Sama_2210	0.44	-1.6
2,671,488	+		Sama_2210	0.50	-2.2
2,671,488	+		Sama_2210	0.50	-0.8
2,671,488	+		Sama_2210	0.50	-1.2
2,671,489	-		Sama_2210	0.50	-0.2
2,671,503	+		Sama_2210	0.52	+0.6
2,671,537	+		Sama_2210	0.57	-0.1
2,671,538	-		Sama_2210	0.57	-0.0
2,671,550	-		Sama_2210	0.59	-1.5
2,671,748	+				+0.5
2,671,748	+				-0.1
2,671,748	+				+0.3
2,671,749	-				+0.8
2,671,749	-				-0.7
2,671,749	-				+2.3
2,671,749	-				-0.2
2,671,787	+				-0.2
2,671,787	+				+0.6
2,671,902	+				+2.2
2,671,902	+				+0.8
2,671,903	-				+0.0
2,671,903	-				+0.4
2,671,903	-				+0.1
2,671,970	+		Sama_2211	0.12	-0.6
2,671,971	-		Sama_2211	0.12	-0.2
2,671,971	-		Sama_2211	0.12	+0.6
2,671,971	-		Sama_2211	0.12	-1.0
2,671,971	-		Sama_2211	0.12	-0.5
2,671,971	-		Sama_2211	0.12	-0.9
2,671,997	-		Sama_2211	0.13	+0.6
2,671,997	-		Sama_2211	0.13	-0.2
2,672,113	+		Sama_2211	0.22	+1.3
2,672,113	+		Sama_2211	0.22	+1.1
2,672,113	+		Sama_2211	0.22	+0.3
2,672,113	+		Sama_2211	0.22	-1.2
2,672,113	+		Sama_2211	0.22	-0.1
2,672,113	+		Sama_2211	0.22	-1.8
2,672,113	+		Sama_2211	0.22	+1.1
2,672,114	-		Sama_2211	0.22	-0.8
2,672,114	-		Sama_2211	0.22	+0.5
2,672,114	-		Sama_2211	0.22	-0.1
2,672,114	-		Sama_2211	0.22	-1.6
2,672,114	-		Sama_2211	0.22	+0.8
2,672,114	-		Sama_2211	0.22	+1.3
2,672,114	-		Sama_2211	0.22	-0.2
2,672,114	-		Sama_2211	0.22	-1.0
2,672,114	-		Sama_2211	0.22	+1.1
2,672,114	-		Sama_2211	0.22	-1.2
2,672,170	+		Sama_2211	0.26	-0.1
2,672,190	+		Sama_2211	0.27	+0.5
2,672,230	+		Sama_2211	0.30	+1.9
2,672,243	-		Sama_2211	0.31	-0.4
2,672,257	+		Sama_2211	0.32	+0.1
2,672,257	+		Sama_2211	0.32	-0.8
2,672,257	+		Sama_2211	0.32	-2.2
2,672,285	+		Sama_2211	0.34	+1.0
2,672,286	-		Sama_2211	0.34	-0.6
2,672,317	+		Sama_2211	0.36	+0.3
2,672,317	+		Sama_2211	0.36	-0.2
2,672,317	+		Sama_2211	0.36	+0.2
2,672,317	+		Sama_2211	0.36	+1.3
2,672,317	+		Sama_2211	0.36	-0.2
2,672,317	+		Sama_2211	0.36	+0.3
2,672,317	+		Sama_2211	0.36	+0.7
2,672,317	+		Sama_2211	0.36	+0.4
2,672,317	+		Sama_2211	0.36	-1.0
2,672,318	-		Sama_2211	0.36	+0.5
2,672,318	-		Sama_2211	0.36	+0.3
2,672,318	-		Sama_2211	0.36	-0.6
2,672,318	-		Sama_2211	0.36	+1.0
2,672,318	-		Sama_2211	0.36	+0.8
2,672,318	-		Sama_2211	0.36	-2.8
2,672,318	-		Sama_2211	0.36	-1.6
2,672,318	-		Sama_2211	0.36	+2.1
2,672,318	-		Sama_2211	0.36	+0.5
2,672,318	-		Sama_2211	0.36	-0.2
2,672,318	-		Sama_2211	0.36	-0.6
2,672,323	+		Sama_2211	0.37	-0.8
2,672,323	+		Sama_2211	0.37	+1.6
2,672,378	+		Sama_2211	0.41	+0.8
2,672,378	+		Sama_2211	0.41	+1.1
2,672,379	-		Sama_2211	0.41	-1.2
2,672,379	-		Sama_2211	0.41	+2.1
2,672,379	-		Sama_2211	0.41	-0.1
2,672,550	-		Sama_2211	0.53	+0.7
2,672,550	-		Sama_2211	0.53	-1.8
2,672,556	-		Sama_2211	0.53	-1.8
2,672,556	-		Sama_2211	0.53	+1.6
2,672,586	+		Sama_2211	0.56	-0.4
2,672,587	-		Sama_2211	0.56	+0.5
2,672,632	-		Sama_2211	0.59	+0.0
2,672,632	-		Sama_2211	0.59	+0.3
2,672,748	+		Sama_2211	0.67	-0.2
2,672,748	+		Sama_2211	0.67	+0.6
2,672,748	+		Sama_2211	0.67	+1.0
2,672,748	+		Sama_2211	0.67	-0.7
2,672,749	-		Sama_2211	0.67	-1.5
2,672,749	-		Sama_2211	0.67	+0.7
2,672,752	+		Sama_2211	0.67	+0.8
2,672,752	+		Sama_2211	0.67	+0.1
2,672,753	-		Sama_2211	0.67	+1.5