Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_765 and HP15_766 are separated by 6 nucleotides HP15_766 and HP15_767 are separated by 134 nucleotides
HP15_765: HP15_765 - threonine synthase, at 774,334 to 775,734
_765
HP15_766: HP15_766 - bacterial RecJ exonuclease, at 775,741 to 777,474
_766
HP15_767: HP15_767 - peptide chain release factor 2, at 777,609 to 778,664
_767
Position (kb) 775
776
777
778 Strain fitness (log2 ratio) -1
0
1 at 775.767 kb on + strand at 775.832 kb on - strand at 775.879 kb on - strand at 775.915 kb on - strand, within HP15_766 at 775.915 kb on - strand, within HP15_766 at 775.993 kb on - strand, within HP15_766 at 776.000 kb on + strand, within HP15_766 at 776.125 kb on + strand, within HP15_766 at 776.273 kb on + strand, within HP15_766 at 776.330 kb on + strand, within HP15_766 at 776.338 kb on - strand, within HP15_766 at 776.361 kb on + strand, within HP15_766 at 776.624 kb on + strand, within HP15_766 at 776.677 kb on - strand, within HP15_766 at 776.677 kb on - strand, within HP15_766 at 776.807 kb on - strand, within HP15_766 at 776.807 kb on - strand, within HP15_766 at 776.867 kb on + strand, within HP15_766 at 776.879 kb on + strand, within HP15_766 at 776.887 kb on - strand, within HP15_766 at 776.887 kb on - strand, within HP15_766 at 776.887 kb on - strand, within HP15_766 at 776.898 kb on - strand, within HP15_766 at 776.933 kb on + strand, within HP15_766 at 776.940 kb on - strand, within HP15_766 at 777.076 kb on + strand, within HP15_766 at 777.190 kb on - strand, within HP15_766 at 777.391 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 775,767 + +1.1 775,832 - +1.2 775,879 - +0.3 775,915 - HP15_766 0.10 +0.1 775,915 - HP15_766 0.10 +0.1 775,993 - HP15_766 0.15 -0.1 776,000 + HP15_766 0.15 +0.4 776,125 + HP15_766 0.22 -0.1 776,273 + HP15_766 0.31 -0.6 776,330 + HP15_766 0.34 +0.6 776,338 - HP15_766 0.34 -0.9 776,361 + HP15_766 0.36 +0.2 776,624 + HP15_766 0.51 +0.1 776,677 - HP15_766 0.54 -0.5 776,677 - HP15_766 0.54 +0.1 776,807 - HP15_766 0.61 +0.3 776,807 - HP15_766 0.61 +0.8 776,867 + HP15_766 0.65 -0.6 776,879 + HP15_766 0.66 +1.3 776,887 - HP15_766 0.66 -0.2 776,887 - HP15_766 0.66 -0.8 776,887 - HP15_766 0.66 -0.6 776,898 - HP15_766 0.67 -0.1 776,933 + HP15_766 0.69 -1.2 776,940 - HP15_766 0.69 -0.0 777,076 + HP15_766 0.77 -0.3 777,190 - HP15_766 0.84 -0.4 777,391 - +0.6
Or see this region's nucleotide sequence