Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4317 and Psest_4318 are separated by 97 nucleotides Psest_4318 and Psest_4319 are separated by 6 nucleotides Psest_4319 and Psest_4320 are separated by 258 nucleotides
Psest_4317: Psest_4317 - zinc-binding alcohol dehydrogenase family protein, at 4,517,162 to 4,518,145
_4317
Psest_4318: Psest_4318 - Predicted dioxygenase of extradiol dioxygenase family, at 4,518,243 to 4,518,668
_4318
Psest_4319: Psest_4319 - Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily, at 4,518,675 to 4,519,211
_4319
Psest_4320: Psest_4320 - Zn-dependent oligopeptidases, at 4,519,470 to 4,521,521
_4320
Position (kb)
4518
4519 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4517.359 kb on - strand, within Psest_4317 at 4517.374 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.463 kb on + strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.464 kb on - strand, within Psest_4317 at 4517.581 kb on - strand, within Psest_4317 at 4517.620 kb on + strand, within Psest_4317 at 4517.621 kb on - strand, within Psest_4317 at 4517.643 kb on + strand, within Psest_4317 at 4517.644 kb on - strand, within Psest_4317 at 4517.781 kb on + strand, within Psest_4317 at 4517.781 kb on + strand, within Psest_4317 at 4517.781 kb on + strand, within Psest_4317 at 4517.782 kb on - strand, within Psest_4317 at 4517.782 kb on - strand, within Psest_4317 at 4517.859 kb on + strand, within Psest_4317 at 4517.860 kb on - strand, within Psest_4317 at 4518.122 kb on + strand at 4518.207 kb on + strand at 4518.207 kb on + strand at 4518.208 kb on - strand at 4518.208 kb on - strand at 4518.242 kb on + strand at 4518.242 kb on + strand at 4518.242 kb on + strand at 4518.242 kb on + strand at 4518.242 kb on + strand at 4518.242 kb on + strand at 4518.243 kb on - strand at 4518.243 kb on - strand at 4518.243 kb on - strand at 4518.243 kb on - strand at 4518.243 kb on - strand at 4518.243 kb on - strand at 4518.243 kb on - strand at 4518.243 kb on - strand at 4518.306 kb on + strand, within Psest_4318 at 4518.306 kb on + strand, within Psest_4318 at 4518.307 kb on - strand, within Psest_4318 at 4518.382 kb on + strand, within Psest_4318 at 4518.383 kb on - strand, within Psest_4318 at 4518.383 kb on - strand, within Psest_4318 at 4518.383 kb on - strand, within Psest_4318 at 4518.455 kb on - strand, within Psest_4318 at 4518.552 kb on + strand, within Psest_4318 at 4518.552 kb on + strand, within Psest_4318 at 4518.552 kb on + strand, within Psest_4318 at 4518.553 kb on - strand, within Psest_4318 at 4518.715 kb on + strand at 4518.715 kb on + strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.716 kb on - strand at 4518.730 kb on + strand, within Psest_4319 at 4518.731 kb on - strand, within Psest_4319 at 4518.731 kb on - strand, within Psest_4319 at 4518.793 kb on + strand, within Psest_4319 at 4518.793 kb on + strand, within Psest_4319 at 4518.793 kb on + strand, within Psest_4319 at 4518.793 kb on + strand, within Psest_4319 at 4518.793 kb on + strand, within Psest_4319 at 4518.793 kb on + strand, within Psest_4319 at 4518.793 kb on + strand, within Psest_4319 at 4518.794 kb on - strand, within Psest_4319 at 4518.997 kb on + strand, within Psest_4319 at 4519.214 kb on + strand at 4519.215 kb on - strand at 4519.215 kb on - strand at 4519.248 kb on + strand at 4519.248 kb on + strand at 4519.248 kb on + strand at 4519.248 kb on + strand at 4519.248 kb on + strand at 4519.248 kb on + strand at 4519.249 kb on - strand at 4519.249 kb on - strand at 4519.249 kb on - strand at 4519.252 kb on + strand at 4519.252 kb on + strand at 4519.252 kb on + strand at 4519.252 kb on + strand at 4519.252 kb on + strand at 4519.252 kb on + strand at 4519.252 kb on + strand at 4519.252 kb on + strand at 4519.253 kb on - strand at 4519.253 kb on - strand at 4519.253 kb on - strand at 4519.317 kb on + strand at 4519.321 kb on + strand at 4519.388 kb on + strand at 4519.388 kb on + strand at 4519.388 kb on + strand at 4519.389 kb on - strand at 4519.389 kb on - strand at 4519.516 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 4,517,359 - Psest_4317 0.20 -1.0 4,517,374 + Psest_4317 0.22 -0.0 4,517,463 + Psest_4317 0.31 -0.8 4,517,463 + Psest_4317 0.31 +0.2 4,517,463 + Psest_4317 0.31 -1.8 4,517,463 + Psest_4317 0.31 -2.6 4,517,463 + Psest_4317 0.31 +0.1 4,517,463 + Psest_4317 0.31 +0.5 4,517,463 + Psest_4317 0.31 -0.5 4,517,463 + Psest_4317 0.31 +0.1 4,517,463 + Psest_4317 0.31 -1.8 4,517,463 + Psest_4317 0.31 +1.4 4,517,464 - Psest_4317 0.31 +0.7 4,517,464 - Psest_4317 0.31 +1.3 4,517,464 - Psest_4317 0.31 +0.2 4,517,464 - Psest_4317 0.31 -0.5 4,517,464 - Psest_4317 0.31 +0.3 4,517,464 - Psest_4317 0.31 +0.5 4,517,464 - Psest_4317 0.31 -0.8 4,517,464 - Psest_4317 0.31 -0.5 4,517,464 - Psest_4317 0.31 +0.8 4,517,464 - Psest_4317 0.31 -0.1 4,517,581 - Psest_4317 0.43 -1.1 4,517,620 + Psest_4317 0.47 -0.2 4,517,621 - Psest_4317 0.47 -3.1 4,517,643 + Psest_4317 0.49 +0.6 4,517,644 - Psest_4317 0.49 +0.0 4,517,781 + Psest_4317 0.63 -1.9 4,517,781 + Psest_4317 0.63 -1.0 4,517,781 + Psest_4317 0.63 -2.9 4,517,782 - Psest_4317 0.63 -3.5 4,517,782 - Psest_4317 0.63 +1.1 4,517,859 + Psest_4317 0.71 -0.8 4,517,860 - Psest_4317 0.71 -1.0 4,518,122 + +0.4 4,518,207 + +1.0 4,518,207 + -2.4 4,518,208 - +1.0 4,518,208 - +0.4 4,518,242 + -0.1 4,518,242 + -1.2 4,518,242 + -1.7 4,518,242 + -0.3 4,518,242 + -1.5 4,518,242 + +0.5 4,518,243 - -0.5 4,518,243 - +2.3 4,518,243 - +0.2 4,518,243 - -1.2 4,518,243 - +1.0 4,518,243 - -2.9 4,518,243 - +0.4 4,518,243 - -0.6 4,518,306 + Psest_4318 0.15 -1.3 4,518,306 + Psest_4318 0.15 -0.5 4,518,307 - Psest_4318 0.15 -1.1 4,518,382 + Psest_4318 0.33 -2.0 4,518,383 - Psest_4318 0.33 -1.4 4,518,383 - Psest_4318 0.33 -0.4 4,518,383 - Psest_4318 0.33 -1.3 4,518,455 - Psest_4318 0.50 -0.5 4,518,552 + Psest_4318 0.73 -2.4 4,518,552 + Psest_4318 0.73 +0.5 4,518,552 + Psest_4318 0.73 -2.5 4,518,553 - Psest_4318 0.73 +2.2 4,518,715 + -2.6 4,518,715 + -1.4 4,518,716 - -0.3 4,518,716 - -0.9 4,518,716 - -0.4 4,518,716 - -1.0 4,518,716 - -2.4 4,518,716 - -1.5 4,518,716 - +2.0 4,518,716 - +1.3 4,518,716 - -0.0 4,518,716 - -0.5 4,518,716 - -0.8 4,518,716 - -1.0 4,518,730 + Psest_4319 0.10 -0.0 4,518,731 - Psest_4319 0.10 -0.9 4,518,731 - Psest_4319 0.10 +1.0 4,518,793 + Psest_4319 0.22 +0.8 4,518,793 + Psest_4319 0.22 -0.8 4,518,793 + Psest_4319 0.22 -2.0 4,518,793 + Psest_4319 0.22 -0.2 4,518,793 + Psest_4319 0.22 +0.7 4,518,793 + Psest_4319 0.22 -0.3 4,518,793 + Psest_4319 0.22 -0.3 4,518,794 - Psest_4319 0.22 +1.1 4,518,997 + Psest_4319 0.60 -1.2 4,519,214 + -0.6 4,519,215 - -0.8 4,519,215 - +0.3 4,519,248 + +2.0 4,519,248 + -2.1 4,519,248 + -1.4 4,519,248 + -0.7 4,519,248 + +0.5 4,519,248 + -1.1 4,519,249 - +0.1 4,519,249 - -1.2 4,519,249 - -0.2 4,519,252 + -1.7 4,519,252 + -0.6 4,519,252 + -0.0 4,519,252 + +0.8 4,519,252 + +0.3 4,519,252 + -0.7 4,519,252 + +0.4 4,519,252 + +0.2 4,519,253 - -1.4 4,519,253 - +2.0 4,519,253 - +0.8 4,519,317 + -2.1 4,519,321 + -1.9 4,519,388 + -0.4 4,519,388 + -0.4 4,519,388 + -0.4 4,519,389 - +0.2 4,519,389 - +1.1 4,519,516 - -0.4
Or see this region's nucleotide sequence