Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2763 and Psest_2764 overlap by 22 nucleotides Psest_2764 and Psest_2765 are separated by 86 nucleotides Psest_2765 and Psest_2766 are separated by 162 nucleotides Psest_2766 and Psest_2767 are separated by 5 nucleotides
Psest_2763: Psest_2763 - Cellobiose phosphorylase, at 2,951,266 to 2,959,797
_2763
Psest_2764: Psest_2764 - hypothetical protein, at 2,959,776 to 2,959,889
_2764
Psest_2765: Psest_2765 - Collagenase and related proteases, at 2,959,976 to 2,961,976
_2765
Psest_2766: Psest_2766 - hypothetical protein, at 2,962,139 to 2,962,735
_2766
Psest_2767: Psest_2767 - Uncharacterized conserved protein, at 2,962,741 to 2,963,472
_2767
Position (kb)
2959
2960
2961
2962 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2959.258 kb on + strand at 2959.259 kb on - strand at 2959.259 kb on - strand at 2959.303 kb on + strand at 2959.304 kb on - strand at 2959.429 kb on + strand at 2959.429 kb on + strand at 2959.429 kb on + strand at 2959.445 kb on - strand at 2959.466 kb on - strand at 2959.507 kb on + strand at 2959.507 kb on + strand at 2959.508 kb on - strand at 2959.795 kb on + strand at 2959.795 kb on + strand at 2959.796 kb on - strand at 2959.822 kb on + strand, within Psest_2764 at 2959.870 kb on + strand, within Psest_2764 at 2959.937 kb on + strand at 2960.069 kb on + strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.070 kb on - strand at 2960.240 kb on + strand, within Psest_2765 at 2960.241 kb on - strand, within Psest_2765 at 2960.241 kb on - strand, within Psest_2765 at 2960.709 kb on - strand, within Psest_2765 at 2960.709 kb on - strand, within Psest_2765 at 2960.723 kb on + strand, within Psest_2765 at 2960.723 kb on + strand, within Psest_2765 at 2960.724 kb on - strand, within Psest_2765 at 2960.724 kb on - strand, within Psest_2765 at 2960.724 kb on - strand, within Psest_2765 at 2960.724 kb on - strand, within Psest_2765 at 2960.744 kb on + strand, within Psest_2765 at 2960.744 kb on + strand, within Psest_2765 at 2960.745 kb on - strand, within Psest_2765 at 2960.747 kb on + strand, within Psest_2765 at 2960.871 kb on - strand, within Psest_2765 at 2961.404 kb on + strand, within Psest_2765 at 2961.404 kb on + strand, within Psest_2765 at 2961.405 kb on - strand, within Psest_2765 at 2961.405 kb on - strand, within Psest_2765 at 2961.405 kb on - strand, within Psest_2765 at 2961.593 kb on + strand, within Psest_2765 at 2961.594 kb on - strand, within Psest_2765 at 2961.594 kb on - strand, within Psest_2765 at 2961.594 kb on - strand, within Psest_2765 at 2961.602 kb on + strand, within Psest_2765 at 2961.602 kb on + strand, within Psest_2765 at 2961.602 kb on + strand, within Psest_2765 at 2961.603 kb on - strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.627 kb on - strand, within Psest_2765 at 2961.627 kb on - strand, within Psest_2765 at 2961.882 kb on + strand at 2961.882 kb on + strand at 2961.883 kb on - strand at 2961.883 kb on - strand at 2961.883 kb on - strand at 2962.059 kb on + strand at 2962.419 kb on + strand, within Psest_2766 at 2962.886 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.899 kb on - strand, within Psest_2767 at 2962.899 kb on - strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,959,258 + +0.6 2,959,259 - -0.4 2,959,259 - +1.6 2,959,303 + -1.6 2,959,304 - -0.3 2,959,429 + -1.9 2,959,429 + -0.1 2,959,429 + +0.1 2,959,445 - +0.3 2,959,466 - -1.4 2,959,507 + +1.4 2,959,507 + +0.2 2,959,508 - -1.9 2,959,795 + +1.0 2,959,795 + -0.6 2,959,796 - -0.6 2,959,822 + Psest_2764 0.40 -1.0 2,959,870 + Psest_2764 0.82 -1.3 2,959,937 + +0.0 2,960,069 + -1.6 2,960,070 - -1.7 2,960,070 - -1.8 2,960,070 - -0.6 2,960,070 - -2.8 2,960,070 - -2.1 2,960,070 - -1.4 2,960,070 - -2.8 2,960,070 - +2.1 2,960,070 - -0.8 2,960,240 + Psest_2765 0.13 -1.9 2,960,241 - Psest_2765 0.13 -0.6 2,960,241 - Psest_2765 0.13 -0.0 2,960,709 - Psest_2765 0.37 +1.2 2,960,709 - Psest_2765 0.37 +0.4 2,960,723 + Psest_2765 0.37 -1.3 2,960,723 + Psest_2765 0.37 -0.1 2,960,724 - Psest_2765 0.37 +0.6 2,960,724 - Psest_2765 0.37 -0.4 2,960,724 - Psest_2765 0.37 +0.6 2,960,724 - Psest_2765 0.37 -0.8 2,960,744 + Psest_2765 0.38 -1.0 2,960,744 + Psest_2765 0.38 -1.0 2,960,745 - Psest_2765 0.38 -1.1 2,960,747 + Psest_2765 0.39 +0.2 2,960,871 - Psest_2765 0.45 +0.2 2,961,404 + Psest_2765 0.71 -1.0 2,961,404 + Psest_2765 0.71 -0.0 2,961,405 - Psest_2765 0.71 +0.1 2,961,405 - Psest_2765 0.71 -0.4 2,961,405 - Psest_2765 0.71 -0.8 2,961,593 + Psest_2765 0.81 +0.1 2,961,594 - Psest_2765 0.81 -2.2 2,961,594 - Psest_2765 0.81 -0.3 2,961,594 - Psest_2765 0.81 -1.4 2,961,602 + Psest_2765 0.81 -1.3 2,961,602 + Psest_2765 0.81 -4.5 2,961,602 + Psest_2765 0.81 -1.6 2,961,603 - Psest_2765 0.81 -0.8 2,961,626 + Psest_2765 0.82 -0.7 2,961,626 + Psest_2765 0.82 -0.0 2,961,626 + Psest_2765 0.82 +1.1 2,961,626 + Psest_2765 0.82 +0.6 2,961,626 + Psest_2765 0.82 -0.1 2,961,627 - Psest_2765 0.83 -1.4 2,961,627 - Psest_2765 0.83 -1.0 2,961,882 + +0.2 2,961,882 + +0.3 2,961,883 - -0.8 2,961,883 - +2.0 2,961,883 - -1.0 2,962,059 + -2.2 2,962,419 + Psest_2766 0.47 -1.7 2,962,886 + Psest_2767 0.20 -2.2 2,962,898 + Psest_2767 0.21 -0.0 2,962,898 + Psest_2767 0.21 -0.0 2,962,898 + Psest_2767 0.21 -0.4 2,962,898 + Psest_2767 0.21 -0.7 2,962,899 - Psest_2767 0.22 -0.4 2,962,899 - Psest_2767 0.22 -0.8 2,962,902 + Psest_2767 0.22 -1.0 2,962,902 + Psest_2767 0.22 +0.6 2,962,902 + Psest_2767 0.22 +0.8 2,962,902 + Psest_2767 0.22 +2.2 2,962,902 + Psest_2767 0.22 +1.8 2,962,902 + Psest_2767 0.22 -0.2 2,962,902 + Psest_2767 0.22 -1.1 2,962,902 + Psest_2767 0.22 +0.6 2,962,902 + Psest_2767 0.22 +0.3 2,962,902 + Psest_2767 0.22 -0.2 2,962,902 + Psest_2767 0.22 -0.0 2,962,902 + Psest_2767 0.22 -0.2 2,962,902 + Psest_2767 0.22 -0.2 2,962,902 + Psest_2767 0.22 -0.3 2,962,902 + Psest_2767 0.22 -0.2 2,962,903 - Psest_2767 0.22 +0.9 2,962,903 - Psest_2767 0.22 -2.3 2,962,903 - Psest_2767 0.22 -2.5 2,962,903 - Psest_2767 0.22 -3.6
Or see this region's nucleotide sequence