Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2516 and HP15_2517 are separated by 108 nucleotides HP15_2517 and HP15_2518 are separated by 11 nucleotides
HP15_2516: HP15_2516 - GTPase - translation elongation factor, at 2,654,842 to 2,656,647
_2516
HP15_2517: HP15_2517 - PAS sensor diguanylate cyclase/phosphodiesterase, at 2,656,756 to 2,658,840
_2517
HP15_2518: HP15_2518 - phosphoserine phosphatase SerB, at 2,658,852 to 2,660,084
_2518
Position (kb)
2656
2657
2658
2659 Strain fitness (log2 ratio)
-1
0
1
2 at 2655.848 kb on + strand, within HP15_2516 at 2655.848 kb on + strand, within HP15_2516 at 2655.850 kb on + strand, within HP15_2516 at 2655.856 kb on - strand, within HP15_2516 at 2655.856 kb on - strand, within HP15_2516 at 2655.858 kb on - strand, within HP15_2516 at 2655.858 kb on - strand, within HP15_2516 at 2656.059 kb on + strand, within HP15_2516 at 2656.132 kb on - strand, within HP15_2516 at 2656.222 kb on + strand, within HP15_2516 at 2656.237 kb on - strand, within HP15_2516 at 2656.334 kb on + strand, within HP15_2516 at 2656.359 kb on + strand, within HP15_2516 at 2656.364 kb on + strand, within HP15_2516 at 2656.492 kb on + strand at 2656.524 kb on - strand at 2656.664 kb on + strand at 2656.664 kb on + strand at 2656.716 kb on + strand at 2656.968 kb on - strand, within HP15_2517 at 2657.038 kb on - strand, within HP15_2517 at 2657.052 kb on + strand, within HP15_2517 at 2657.104 kb on + strand, within HP15_2517 at 2657.166 kb on - strand, within HP15_2517 at 2657.243 kb on - strand, within HP15_2517 at 2657.261 kb on - strand, within HP15_2517 at 2657.571 kb on + strand, within HP15_2517 at 2657.785 kb on - strand, within HP15_2517 at 2657.886 kb on - strand, within HP15_2517 at 2657.914 kb on + strand, within HP15_2517 at 2657.961 kb on + strand, within HP15_2517 at 2658.034 kb on - strand, within HP15_2517 at 2658.044 kb on + strand, within HP15_2517 at 2658.060 kb on - strand, within HP15_2517 at 2658.243 kb on - strand, within HP15_2517 at 2658.308 kb on + strand, within HP15_2517 at 2658.387 kb on + strand, within HP15_2517 at 2658.462 kb on + strand, within HP15_2517 at 2658.576 kb on + strand, within HP15_2517 at 2658.681 kb on + strand at 2658.764 kb on - strand at 2658.850 kb on + strand at 2658.850 kb on + strand at 2658.850 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,655,848 + HP15_2516 0.56 +0.1 2,655,848 + HP15_2516 0.56 -0.0 2,655,850 + HP15_2516 0.56 -0.8 2,655,856 - HP15_2516 0.56 +0.9 2,655,856 - HP15_2516 0.56 -0.3 2,655,858 - HP15_2516 0.56 +0.3 2,655,858 - HP15_2516 0.56 +0.2 2,656,059 + HP15_2516 0.67 -0.2 2,656,132 - HP15_2516 0.71 +0.9 2,656,222 + HP15_2516 0.76 -0.6 2,656,237 - HP15_2516 0.77 +0.1 2,656,334 + HP15_2516 0.83 +0.5 2,656,359 + HP15_2516 0.84 -0.1 2,656,364 + HP15_2516 0.84 -0.8 2,656,492 + +0.6 2,656,524 - +1.5 2,656,664 + +0.4 2,656,664 + +0.4 2,656,716 + +2.4 2,656,968 - HP15_2517 0.10 -1.1 2,657,038 - HP15_2517 0.14 -0.3 2,657,052 + HP15_2517 0.14 +0.1 2,657,104 + HP15_2517 0.17 +0.0 2,657,166 - HP15_2517 0.20 +0.6 2,657,243 - HP15_2517 0.23 -1.3 2,657,261 - HP15_2517 0.24 -0.5 2,657,571 + HP15_2517 0.39 -1.6 2,657,785 - HP15_2517 0.49 -0.1 2,657,886 - HP15_2517 0.54 -0.1 2,657,914 + HP15_2517 0.56 -0.3 2,657,961 + HP15_2517 0.58 +0.1 2,658,034 - HP15_2517 0.61 -0.0 2,658,044 + HP15_2517 0.62 +0.1 2,658,060 - HP15_2517 0.63 +1.6 2,658,243 - HP15_2517 0.71 +0.4 2,658,308 + HP15_2517 0.74 +0.1 2,658,387 + HP15_2517 0.78 -0.6 2,658,462 + HP15_2517 0.82 +0.0 2,658,576 + HP15_2517 0.87 -1.2 2,658,681 + -0.0 2,658,764 - -0.7 2,658,850 + -0.3 2,658,850 + +0.3 2,658,850 + -0.8
Or see this region's nucleotide sequence