Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2302 and HP15_2303 are separated by 31 nucleotides HP15_2303 and HP15_2304 are separated by 92 nucleotides HP15_2304 and HP15_2305 are separated by 60 nucleotides
HP15_2302: HP15_2302 - flagellar biosynthesis sigma factor FliA, at 2,422,999 to 2,423,742
_2302
HP15_2303: HP15_2303 - flagellar synthesis regulator FleN, at 2,423,774 to 2,424,562
_2303
HP15_2304: HP15_2304 - flagellar biosynthesis regulator FlhF, at 2,424,655 to 2,425,962
_2304
HP15_2305: HP15_2305 - flagellar biosynthesis protein A, at 2,426,023 to 2,428,263
_2305
Position (kb)
2424
2425
2426 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2424.042 kb on + strand, within HP15_2303 at 2424.109 kb on + strand, within HP15_2303 at 2424.117 kb on - strand, within HP15_2303 at 2424.290 kb on + strand, within HP15_2303 at 2424.493 kb on + strand at 2424.625 kb on - strand at 2424.640 kb on - strand at 2424.751 kb on - strand at 2424.762 kb on - strand at 2424.891 kb on + strand, within HP15_2304 at 2425.021 kb on + strand, within HP15_2304 at 2425.024 kb on - strand, within HP15_2304 at 2425.029 kb on - strand, within HP15_2304 at 2425.029 kb on - strand, within HP15_2304 at 2425.034 kb on - strand, within HP15_2304 at 2425.173 kb on + strand, within HP15_2304 at 2425.263 kb on + strand, within HP15_2304 at 2425.296 kb on + strand, within HP15_2304 at 2425.326 kb on + strand, within HP15_2304 at 2425.413 kb on - strand, within HP15_2304 at 2425.413 kb on - strand, within HP15_2304 at 2425.451 kb on - strand, within HP15_2304 at 2425.561 kb on + strand, within HP15_2304 at 2425.592 kb on + strand, within HP15_2304 at 2425.615 kb on + strand, within HP15_2304 at 2425.785 kb on - strand, within HP15_2304 at 2425.831 kb on - strand, within HP15_2304 at 2425.904 kb on + strand at 2425.912 kb on - strand at 2425.928 kb on + strand at 2425.928 kb on + strand at 2425.928 kb on + strand at 2426.053 kb on - strand at 2426.105 kb on - strand at 2426.197 kb on + strand at 2426.199 kb on + strand at 2426.199 kb on + strand at 2426.542 kb on + strand, within HP15_2305 at 2426.620 kb on - strand, within HP15_2305 at 2426.622 kb on + strand, within HP15_2305 at 2426.690 kb on + strand, within HP15_2305 at 2426.702 kb on + strand, within HP15_2305 at 2426.702 kb on - strand, within HP15_2305 at 2426.720 kb on - strand, within HP15_2305 at 2426.900 kb on - strand, within HP15_2305 at 2426.940 kb on - strand, within HP15_2305 at 2426.940 kb on - strand, within HP15_2305
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,424,042 + HP15_2303 0.34 -1.0 2,424,109 + HP15_2303 0.42 -1.1 2,424,117 - HP15_2303 0.43 -0.5 2,424,290 + HP15_2303 0.65 -2.5 2,424,493 + -2.9 2,424,625 - -1.7 2,424,640 - -0.3 2,424,751 - -2.3 2,424,762 - +0.7 2,424,891 + HP15_2304 0.18 -1.4 2,425,021 + HP15_2304 0.28 -0.6 2,425,024 - HP15_2304 0.28 -1.2 2,425,029 - HP15_2304 0.29 -0.7 2,425,029 - HP15_2304 0.29 +0.4 2,425,034 - HP15_2304 0.29 -0.2 2,425,173 + HP15_2304 0.40 -1.1 2,425,263 + HP15_2304 0.46 -1.0 2,425,296 + HP15_2304 0.49 +1.7 2,425,326 + HP15_2304 0.51 -0.6 2,425,413 - HP15_2304 0.58 -1.1 2,425,413 - HP15_2304 0.58 -0.3 2,425,451 - HP15_2304 0.61 -2.6 2,425,561 + HP15_2304 0.69 -1.1 2,425,592 + HP15_2304 0.72 -0.2 2,425,615 + HP15_2304 0.73 -0.5 2,425,785 - HP15_2304 0.86 -0.3 2,425,831 - HP15_2304 0.90 -0.8 2,425,904 + -1.2 2,425,912 - +0.8 2,425,928 + -1.1 2,425,928 + +0.2 2,425,928 + -0.8 2,426,053 - -0.8 2,426,105 - -0.4 2,426,197 + -0.9 2,426,199 + -1.4 2,426,199 + -1.0 2,426,542 + HP15_2305 0.23 -0.6 2,426,620 - HP15_2305 0.27 -1.8 2,426,622 + HP15_2305 0.27 -2.1 2,426,690 + HP15_2305 0.30 -0.8 2,426,702 + HP15_2305 0.30 -1.0 2,426,702 - HP15_2305 0.30 -0.8 2,426,720 - HP15_2305 0.31 -1.5 2,426,900 - HP15_2305 0.39 -1.1 2,426,940 - HP15_2305 0.41 -0.9 2,426,940 - HP15_2305 0.41 -0.8
Or see this region's nucleotide sequence