Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1840 and Psest_1841 are separated by 375 nucleotides Psest_1841 and Psest_1842 are separated by 110 nucleotides
Psest_1840: Psest_1840 - Undecaprenyl-phosphate glucose phosphotransferase, at 1,943,355 to 1,944,782
_1840
Psest_1841: Psest_1841 - lipid kinase YegS, at 1,945,158 to 1,946,069
_1841
Psest_1842: Psest_1842 - Chemotaxis signal transduction protein, at 1,946,180 to 1,947,112
_1842
Position (kb)
1945
1946
1947 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1944.289 kb on + strand, within Psest_1840 at 1944.289 kb on + strand, within Psest_1840 at 1944.289 kb on + strand, within Psest_1840 at 1944.289 kb on + strand, within Psest_1840 at 1944.303 kb on + strand, within Psest_1840 at 1944.303 kb on + strand, within Psest_1840 at 1944.303 kb on + strand, within Psest_1840 at 1944.304 kb on - strand, within Psest_1840 at 1944.306 kb on - strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.568 kb on + strand, within Psest_1840 at 1944.569 kb on - strand, within Psest_1840 at 1944.569 kb on - strand, within Psest_1840 at 1944.569 kb on - strand, within Psest_1840 at 1944.569 kb on - strand, within Psest_1840 at 1944.569 kb on - strand, within Psest_1840 at 1944.619 kb on - strand, within Psest_1840 at 1944.702 kb on + strand at 1944.702 kb on + strand at 1944.702 kb on + strand at 1944.727 kb on + strand at 1944.727 kb on + strand at 1944.728 kb on - strand at 1944.728 kb on - strand at 1944.751 kb on + strand at 1944.751 kb on + strand at 1944.751 kb on + strand at 1944.751 kb on + strand at 1944.751 kb on + strand at 1944.752 kb on - strand at 1944.752 kb on - strand at 1944.752 kb on - strand at 1944.752 kb on - strand at 1944.752 kb on - strand at 1944.774 kb on + strand at 1944.775 kb on - strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.782 kb on + strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.783 kb on - strand at 1944.826 kb on + strand at 1944.826 kb on + strand at 1944.826 kb on + strand at 1944.827 kb on - strand at 1944.923 kb on + strand at 1944.973 kb on + strand at 1945.123 kb on + strand at 1945.124 kb on - strand at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.496 kb on - strand, within Psest_1841 at 1945.496 kb on - strand, within Psest_1841 at 1945.553 kb on + strand, within Psest_1841 at 1945.632 kb on + strand, within Psest_1841 at 1945.633 kb on - strand, within Psest_1841 at 1945.633 kb on - strand, within Psest_1841 at 1945.746 kb on - strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.815 kb on - strand, within Psest_1841 at 1945.815 kb on - strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.862 kb on - strand, within Psest_1841 at 1945.862 kb on - strand, within Psest_1841 at 1945.862 kb on - strand, within Psest_1841 at 1946.120 kb on + strand at 1946.120 kb on + strand at 1946.150 kb on + strand at 1946.150 kb on + strand at 1946.151 kb on - strand at 1946.347 kb on + strand, within Psest_1842 at 1946.347 kb on + strand, within Psest_1842 at 1946.348 kb on - strand, within Psest_1842 at 1946.468 kb on + strand, within Psest_1842 at 1946.468 kb on + strand, within Psest_1842 at 1946.469 kb on - strand, within Psest_1842 at 1946.574 kb on - strand, within Psest_1842 at 1946.655 kb on - strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.974 kb on - strand, within Psest_1842
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,944,289 + Psest_1840 0.65 +4.6 1,944,289 + Psest_1840 0.65 +4.3 1,944,289 + Psest_1840 0.65 +4.1 1,944,289 + Psest_1840 0.65 +4.5 1,944,303 + Psest_1840 0.66 +4.5 1,944,303 + Psest_1840 0.66 +4.4 1,944,303 + Psest_1840 0.66 +4.4 1,944,304 - Psest_1840 0.66 +4.6 1,944,306 - Psest_1840 0.67 +4.6 1,944,568 + Psest_1840 0.85 +4.3 1,944,568 + Psest_1840 0.85 +4.3 1,944,568 + Psest_1840 0.85 +4.3 1,944,568 + Psest_1840 0.85 +4.3 1,944,568 + Psest_1840 0.85 +4.3 1,944,568 + Psest_1840 0.85 +4.3 1,944,568 + Psest_1840 0.85 +4.5 1,944,568 + Psest_1840 0.85 +4.2 1,944,568 + Psest_1840 0.85 +4.3 1,944,569 - Psest_1840 0.85 +4.3 1,944,569 - Psest_1840 0.85 +4.3 1,944,569 - Psest_1840 0.85 +4.3 1,944,569 - Psest_1840 0.85 +4.1 1,944,569 - Psest_1840 0.85 +4.5 1,944,619 - Psest_1840 0.89 +4.4 1,944,702 + +4.2 1,944,702 + +4.9 1,944,702 + +4.4 1,944,727 + +4.2 1,944,727 + +4.9 1,944,728 - +3.3 1,944,728 - +4.9 1,944,751 + +4.3 1,944,751 + +4.2 1,944,751 + +4.5 1,944,751 + +4.5 1,944,751 + +4.3 1,944,752 - +4.3 1,944,752 - +3.8 1,944,752 - +4.0 1,944,752 - +3.7 1,944,752 - +4.1 1,944,774 + +4.6 1,944,775 - +4.5 1,944,782 + +4.5 1,944,782 + +4.5 1,944,782 + +4.4 1,944,782 + +4.4 1,944,782 + +4.5 1,944,782 + +4.3 1,944,782 + +3.9 1,944,782 + +4.4 1,944,782 + +4.5 1,944,783 - +3.9 1,944,783 - +4.0 1,944,783 - +4.3 1,944,783 - +4.3 1,944,783 - +4.2 1,944,783 - +3.9 1,944,783 - +4.3 1,944,783 - +3.9 1,944,783 - +4.1 1,944,783 - +4.3 1,944,783 - +3.8 1,944,783 - +3.7 1,944,783 - +3.8 1,944,783 - +3.2 1,944,826 + +3.0 1,944,826 + +3.2 1,944,826 + +3.5 1,944,827 - +0.2 1,944,923 + +0.0 1,944,973 + -0.4 1,945,123 + +0.0 1,945,124 - -0.2 1,945,495 + Psest_1841 0.37 +0.7 1,945,495 + Psest_1841 0.37 +0.2 1,945,495 + Psest_1841 0.37 +1.7 1,945,495 + Psest_1841 0.37 -1.5 1,945,495 + Psest_1841 0.37 +0.4 1,945,495 + Psest_1841 0.37 -2.6 1,945,496 - Psest_1841 0.37 -0.4 1,945,496 - Psest_1841 0.37 +2.2 1,945,553 + Psest_1841 0.43 -0.3 1,945,632 + Psest_1841 0.52 +0.7 1,945,633 - Psest_1841 0.52 +0.2 1,945,633 - Psest_1841 0.52 +0.6 1,945,746 - Psest_1841 0.64 +1.2 1,945,810 + Psest_1841 0.71 +0.3 1,945,810 + Psest_1841 0.71 +0.7 1,945,810 + Psest_1841 0.71 -2.9 1,945,810 + Psest_1841 0.71 +0.7 1,945,810 + Psest_1841 0.71 +0.7 1,945,810 + Psest_1841 0.71 -0.4 1,945,810 + Psest_1841 0.71 -0.1 1,945,810 + Psest_1841 0.71 +0.1 1,945,810 + Psest_1841 0.71 +0.5 1,945,810 + Psest_1841 0.71 +0.5 1,945,810 + Psest_1841 0.71 +0.1 1,945,810 + Psest_1841 0.71 +0.5 1,945,810 + Psest_1841 0.71 +0.8 1,945,810 + Psest_1841 0.71 +0.6 1,945,810 + Psest_1841 0.71 +1.6 1,945,810 + Psest_1841 0.71 +0.6 1,945,810 + Psest_1841 0.71 -2.3 1,945,810 + Psest_1841 0.71 +0.2 1,945,810 + Psest_1841 0.71 +0.7 1,945,810 + Psest_1841 0.71 +0.7 1,945,811 - Psest_1841 0.72 +0.8 1,945,811 - Psest_1841 0.72 +0.3 1,945,811 - Psest_1841 0.72 +0.1 1,945,811 - Psest_1841 0.72 +0.2 1,945,811 - Psest_1841 0.72 +1.0 1,945,811 - Psest_1841 0.72 +0.5 1,945,811 - Psest_1841 0.72 -0.3 1,945,811 - Psest_1841 0.72 +0.5 1,945,811 - Psest_1841 0.72 +2.0 1,945,814 + Psest_1841 0.72 +0.9 1,945,814 + Psest_1841 0.72 +1.1 1,945,814 + Psest_1841 0.72 +0.1 1,945,814 + Psest_1841 0.72 -0.0 1,945,815 - Psest_1841 0.72 -0.4 1,945,815 - Psest_1841 0.72 +0.9 1,945,861 + Psest_1841 0.77 +0.4 1,945,861 + Psest_1841 0.77 +1.8 1,945,861 + Psest_1841 0.77 +0.8 1,945,861 + Psest_1841 0.77 +0.3 1,945,861 + Psest_1841 0.77 -0.2 1,945,862 - Psest_1841 0.77 -0.3 1,945,862 - Psest_1841 0.77 -0.5 1,945,862 - Psest_1841 0.77 -2.4 1,946,120 + +1.3 1,946,120 + +2.0 1,946,150 + -0.3 1,946,150 + -0.3 1,946,151 - +1.7 1,946,347 + Psest_1842 0.18 -3.2 1,946,347 + Psest_1842 0.18 +0.6 1,946,348 - Psest_1842 0.18 -1.1 1,946,468 + Psest_1842 0.31 +1.9 1,946,468 + Psest_1842 0.31 +0.6 1,946,469 - Psest_1842 0.31 -0.3 1,946,574 - Psest_1842 0.42 -2.8 1,946,655 - Psest_1842 0.51 -1.7 1,946,966 + Psest_1842 0.84 +0.2 1,946,966 + Psest_1842 0.84 +0.7 1,946,966 + Psest_1842 0.84 +0.1 1,946,966 + Psest_1842 0.84 +0.6 1,946,966 + Psest_1842 0.84 +1.4 1,946,966 + Psest_1842 0.84 -0.2 1,946,966 + Psest_1842 0.84 -0.0 1,946,966 + Psest_1842 0.84 +1.0 1,946,967 - Psest_1842 0.84 -0.6 1,946,967 - Psest_1842 0.84 -0.3 1,946,967 - Psest_1842 0.84 -2.0 1,946,967 - Psest_1842 0.84 +0.2 1,946,967 - Psest_1842 0.84 -0.1 1,946,967 - Psest_1842 0.84 -0.5 1,946,967 - Psest_1842 0.84 -0.6 1,946,974 - Psest_1842 0.85 +1.3
Or see this region's nucleotide sequence