Strain Fitness in Shewanella amazonensis SB2B around Sama_3426

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
4,055,000	+		Sama_3424	0.25	-0.6
4,055,000	+		Sama_3424	0.25	+0.6
4,055,000	+		Sama_3424	0.25	-0.2
4,055,000	+		Sama_3424	0.25	-0.2
4,055,000	+		Sama_3424	0.25	+0.1
4,055,001	-		Sama_3424	0.26	-0.7
4,055,001	-		Sama_3424	0.26	-1.8
4,055,001	-		Sama_3424	0.26	-2.6
4,055,001	-		Sama_3424	0.26	-0.3
4,055,001	-		Sama_3424	0.26	-0.6
4,055,001	-		Sama_3424	0.26	+0.2
4,055,001	-		Sama_3424	0.26	-1.4
4,055,023	+		Sama_3424	0.33	-1.1
4,055,023	+		Sama_3424	0.33	-1.4
4,055,023	+		Sama_3424	0.33	-0.2
4,055,023	+		Sama_3424	0.33	-0.4
4,055,034	+		Sama_3424	0.36	-0.7
4,055,034	+		Sama_3424	0.36	+1.1
4,055,035	-		Sama_3424	0.37	+0.4
4,055,035	-		Sama_3424	0.37	-0.3
4,055,048	+		Sama_3424	0.41	-2.9
4,055,048	+		Sama_3424	0.41	+0.7
4,055,048	+		Sama_3424	0.41	+0.6
4,055,049	-		Sama_3424	0.41	-1.5
4,055,049	-		Sama_3424	0.41	+0.8
4,055,049	-		Sama_3424	0.41	-1.1
4,055,210	+				-1.7
4,055,211	-				-0.6
4,055,222	+				-1.3
4,055,222	+				+1.5
4,055,222	+				-0.0
4,055,223	-				-0.8
4,055,223	-				-0.0
4,055,223	-				-0.3
4,055,236	+				-0.5
4,055,236	+				-0.4
4,055,236	+				+0.4
4,055,237	-				-0.5
4,055,237	-				-0.8
4,055,237	-				-2.0
4,055,237	-				-2.2
4,055,237	-				-0.5
4,055,237	-				+1.7
4,055,240	+				-1.3
4,055,241	-				-1.0
4,055,302	+				-0.0
4,055,303	-				-0.6
4,055,318	+				-0.8
4,055,318	+				+0.9
4,055,318	+				-2.4
4,055,319	-				-0.2
4,055,319	-				-1.1
4,055,319	-				-0.5
4,055,326	-				+0.2
4,055,326	-				+0.1
4,055,326	-				+0.0
4,055,331	+				+1.2
4,055,331	+				-0.2
4,055,331	+				-0.7
4,055,332	-				+0.4
4,055,343	+				+1.3
4,055,343	+				+1.6
4,055,344	-				-0.7
4,055,367	+				+0.6
4,055,368	-				-2.0
4,055,368	-				+0.4
4,055,392	+		Sama_3425	0.11	+0.1
4,055,392	+		Sama_3425	0.11	-0.2
4,055,393	-		Sama_3425	0.11	-1.1
4,055,393	-		Sama_3425	0.11	+1.0
4,055,394	+		Sama_3425	0.12	+1.0
4,055,394	+		Sama_3425	0.12	+1.1
4,055,394	+		Sama_3425	0.12	-0.0
4,055,394	+		Sama_3425	0.12	-0.5
4,055,394	+		Sama_3425	0.12	-0.4
4,055,394	+		Sama_3425	0.12	-0.3
4,055,395	-		Sama_3425	0.12	-0.5
4,055,395	-		Sama_3425	0.12	-0.7
4,055,395	-		Sama_3425	0.12	+1.0
4,055,395	-		Sama_3425	0.12	-0.4
4,055,395	-		Sama_3425	0.12	+0.6
4,055,395	-		Sama_3425	0.12	-0.3
4,055,425	+		Sama_3425	0.17	-0.0
4,055,425	+		Sama_3425	0.17	+1.2
4,055,425	+		Sama_3425	0.17	-0.3
4,055,425	+		Sama_3425	0.17	-1.3
4,055,426	-		Sama_3425	0.18	-0.8
4,055,426	-		Sama_3425	0.18	+0.5
4,055,426	-		Sama_3425	0.18	+0.4
4,055,426	-		Sama_3425	0.18	+0.5
4,055,426	-		Sama_3425	0.18	-0.3
4,055,433	+		Sama_3425	0.19	+1.0
4,055,433	+		Sama_3425	0.19	-0.2
4,055,548	+		Sama_3425	0.40	-1.5
4,055,555	+		Sama_3425	0.42	-0.5
4,055,556	-		Sama_3425	0.42	-0.6
4,055,556	-		Sama_3425	0.42	-0.3
4,055,556	-		Sama_3425	0.42	-0.1
4,055,556	-		Sama_3425	0.42	-0.5
4,055,556	-		Sama_3425	0.42	+0.4
4,055,596	-		Sama_3425	0.49	+0.7
4,055,663	+		Sama_3425	0.62	-0.2
4,055,663	+		Sama_3425	0.62	+0.6
4,055,663	+		Sama_3425	0.62	-0.0
4,055,663	+		Sama_3425	0.62	+0.8
4,055,663	+		Sama_3425	0.62	-0.1
4,055,663	+		Sama_3425	0.62	-2.3
4,055,663	+		Sama_3425	0.62	+0.0
4,055,663	+		Sama_3425	0.62	+0.2
4,055,663	+		Sama_3425	0.62	-1.0
4,055,663	+		Sama_3425	0.62	+1.0
4,055,664	-		Sama_3425	0.62	-0.4
4,055,664	-		Sama_3425	0.62	-0.8
4,055,664	-		Sama_3425	0.62	-0.2
4,055,664	-		Sama_3425	0.62	+1.3
4,055,664	-		Sama_3425	0.62	+0.7
4,055,667	+		Sama_3425	0.62	+2.0
4,055,667	+		Sama_3425	0.62	-0.4
4,055,668	-		Sama_3425	0.63	-0.6
4,055,668	-		Sama_3425	0.63	-1.8
4,055,668	-		Sama_3425	0.63	-0.9
4,055,668	-		Sama_3425	0.63	+0.6
4,055,753	+		Sama_3425	0.78	-0.2
4,055,753	+		Sama_3425	0.78	-0.5
4,055,753	+		Sama_3425	0.78	+0.3
4,055,753	+		Sama_3425	0.78	+0.2
4,055,799	+		Sama_3425	0.87	-1.3
4,055,799	+		Sama_3425	0.87	-0.5
4,055,800	-		Sama_3425	0.87	+0.3
4,055,821	-				-0.7
4,055,821	-				+1.2
4,055,892	+				+0.7
4,055,952	-				-2.2
4,055,964	+				-0.4
4,055,965	-				-2.6
4,056,036	-				-3.0
4,056,044	+				-2.9
4,056,045	-				-2.5
4,056,056	+				-3.6
4,056,057	-				-2.8
4,056,158	+		Sama_3426	0.16	-2.5
4,056,159	-		Sama_3426	0.16	-3.9
4,056,170	+		Sama_3426	0.17	-3.1
4,056,171	-		Sama_3426	0.17	-2.6
4,056,171	-		Sama_3426	0.17	-3.3
4,056,186	-		Sama_3426	0.18	-2.0
4,056,447	-		Sama_3426	0.43	-2.3
4,056,447	-		Sama_3426	0.43	-3.5
4,056,655	+		Sama_3426	0.63	-3.2
4,056,656	-		Sama_3426	0.63	-1.8
4,056,677	+		Sama_3426	0.65	-2.2
4,056,677	+		Sama_3426	0.65	-3.5
4,056,677	+		Sama_3426	0.65	-1.6
4,056,678	-		Sama_3426	0.65	-2.0
4,056,678	-		Sama_3426	0.65	-2.8
4,056,678	-		Sama_3426	0.65	-2.5
4,056,719	+		Sama_3426	0.69	+1.2
4,056,719	+		Sama_3426	0.69	-2.3
4,056,719	+		Sama_3426	0.69	-2.6
4,056,719	+		Sama_3426	0.69	-1.8
4,056,841	-		Sama_3426	0.81	-2.5
4,056,889	+		Sama_3426	0.85	-3.2
4,056,889	+		Sama_3426	0.85	-0.2
4,056,889	+		Sama_3426	0.85	-0.6
4,056,890	-		Sama_3426	0.85	-1.8
4,056,890	-		Sama_3426	0.85	-2.2
4,057,026	+				-0.4
4,057,026	+				+0.5
4,057,026	+				-0.6
4,057,039	+				+0.9
4,057,039	+				-1.0
4,057,040	-				-0.3
4,057,066	-				-3.3
4,057,066	-				-2.5
4,057,066	-				-2.6
4,057,066	-				-3.2
4,057,214	+		Sama_3427	0.11	-1.6
4,057,214	+		Sama_3427	0.11	-2.5
4,057,215	-		Sama_3427	0.11	-2.0
4,057,244	-		Sama_3427	0.13	-2.5
4,057,266	+		Sama_3427	0.15	-1.0
4,057,267	-		Sama_3427	0.15	-2.8
4,057,288	-		Sama_3427	0.16	-2.7
4,057,363	+		Sama_3427	0.21	-1.3
4,057,364	-		Sama_3427	0.22	-0.8
4,057,364	-		Sama_3427	0.22	-1.8
4,057,364	-		Sama_3427	0.22	-1.6
4,057,367	+		Sama_3427	0.22	-2.8
4,057,367	+		Sama_3427	0.22	-0.3
4,057,368	-		Sama_3427	0.22	-2.9
4,057,368	-		Sama_3427	0.22	-2.5
4,057,453	-		Sama_3427	0.28	-2.5
4,057,553	+		Sama_3427	0.35	-2.2
4,057,714	-		Sama_3427	0.46	-1.0
4,057,883	+		Sama_3427	0.58	-0.8
4,057,883	+		Sama_3427	0.58	-1.8
4,057,884	-		Sama_3427	0.58	-2.0
4,057,884	-		Sama_3427	0.58	-2.0
4,057,890	+		Sama_3427	0.59	-3.7
4,057,890	+		Sama_3427	0.59	-3.9
4,057,890	+		Sama_3427	0.59	-2.0
4,057,890	+		Sama_3427	0.59	-2.5
4,058,013	+		Sama_3427	0.67	-2.3
4,058,013	+		Sama_3427	0.67	-1.8
4,058,013	+		Sama_3427	0.67	-2.5
4,058,013	+		Sama_3427	0.67	-2.2
4,058,014	-		Sama_3427	0.68	-2.8
4,058,014	-		Sama_3427	0.68	-2.6