Strain Fitness in Shewanella amazonensis SB2B around Sama_3234

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
3,827,026	-		Sama_3233	0.60	+0.9
3,827,026	-		Sama_3233	0.60	+1.1
3,827,139	+		Sama_3233	0.65	-0.1
3,827,140	-		Sama_3233	0.65	+0.7
3,827,148	+		Sama_3233	0.65	-0.0
3,827,211	+		Sama_3233	0.68	+1.0
3,827,211	+		Sama_3233	0.68	-0.1
3,827,211	+		Sama_3233	0.68	+0.3
3,827,211	+		Sama_3233	0.68	-0.5
3,827,211	+		Sama_3233	0.68	-0.5
3,827,212	-		Sama_3233	0.68	+1.1
3,827,212	-		Sama_3233	0.68	-1.7
3,827,212	-		Sama_3233	0.68	+0.4
3,827,212	-		Sama_3233	0.68	+0.7
3,827,250	-		Sama_3233	0.70	+0.5
3,827,265	+		Sama_3233	0.71	+0.7
3,827,265	+		Sama_3233	0.71	-0.9
3,827,271	+		Sama_3233	0.71	+1.4
3,827,271	+		Sama_3233	0.71	-0.9
3,827,271	+		Sama_3233	0.71	+0.9
3,827,271	+		Sama_3233	0.71	-0.2
3,827,271	+		Sama_3233	0.71	-0.1
3,827,271	+		Sama_3233	0.71	+0.4
3,827,272	-		Sama_3233	0.71	-0.0
3,827,272	-		Sama_3233	0.71	-0.3
3,827,272	-		Sama_3233	0.71	+1.6
3,827,286	-		Sama_3233	0.72	+0.0
3,827,286	-		Sama_3233	0.72	-0.7
3,827,310	+		Sama_3233	0.73	+0.9
3,827,311	-		Sama_3233	0.73	+0.4
3,827,311	-		Sama_3233	0.73	-0.6
3,827,311	-		Sama_3233	0.73	-0.4
3,827,328	+		Sama_3233	0.74	-0.6
3,827,328	+		Sama_3233	0.74	-0.2
3,827,328	+		Sama_3233	0.74	-0.8
3,827,328	+		Sama_3233	0.74	-0.5
3,827,328	+		Sama_3233	0.74	+0.7
3,827,328	+		Sama_3233	0.74	-1.0
3,827,328	+		Sama_3233	0.74	-0.0
3,827,328	+		Sama_3233	0.74	-1.1
3,827,329	-		Sama_3233	0.74	+0.6
3,827,329	-		Sama_3233	0.74	+0.3
3,827,329	-		Sama_3233	0.74	-1.1
3,827,329	-		Sama_3233	0.74	-2.5
3,827,329	-		Sama_3233	0.74	-1.1
3,827,330	+		Sama_3233	0.74	-0.3
3,827,330	+		Sama_3233	0.74	-1.7
3,827,330	+		Sama_3233	0.74	-0.7
3,827,331	-		Sama_3233	0.74	-2.1
3,827,331	-		Sama_3233	0.74	+1.9
3,827,333	-		Sama_3233	0.74	+0.2
3,827,344	+		Sama_3233	0.75	-0.0
3,827,345	-		Sama_3233	0.75	-0.6
3,827,345	-		Sama_3233	0.75	-1.3
3,827,421	+		Sama_3233	0.78	-0.6
3,827,422	-		Sama_3233	0.78	-0.4
3,827,422	-		Sama_3233	0.78	+0.1
3,827,437	-		Sama_3233	0.79	+0.6
3,827,445	+		Sama_3233	0.79	+0.5
3,827,454	-		Sama_3233	0.80	+0.9
3,827,638	+		Sama_3233	0.89	-0.0
3,827,639	-		Sama_3233	0.89	+0.2
3,827,639	-		Sama_3233	0.89	-0.8
3,827,639	-		Sama_3233	0.89	+0.5
3,827,639	-		Sama_3233	0.89	-0.4
3,827,660	+		Sama_3233	0.90	+0.1
3,827,673	+				+0.2
3,827,673	+				-0.3
3,827,673	+				+0.0
3,827,674	-				+1.3
3,827,674	-				-0.6
3,827,674	-				-1.0
3,827,674	-				-1.1
3,827,674	-				+1.0
3,827,739	-				+0.9
3,827,754	+				-1.1
3,827,754	+				+0.1
3,827,754	+				-0.7
3,827,755	-				-0.3
3,827,755	-				+0.4
3,827,755	-				+0.1
3,827,755	-				-0.2
3,827,755	-				-0.3
3,827,755	-				-0.4
3,827,757	+				-1.3
3,827,757	+				+0.6
3,827,757	+				+0.1
3,827,757	+				+0.9
3,827,757	+				-0.2
3,827,757	+				+0.3
3,827,758	-				-1.0
3,827,758	-				-0.1
3,827,865	+				-1.7
3,827,865	+				+0.6
3,827,865	+				-0.1
3,827,866	-				+0.4
3,827,866	-				+0.8
3,827,866	-				+0.3
3,827,866	-				-0.1
3,827,923	+				-0.7
3,827,923	+				-1.5
3,827,923	+				+0.3
3,827,924	-				+0.6
3,827,924	-				+0.9
3,827,924	-				-0.6
3,827,924	-				-1.3
3,827,924	-				+0.2
3,827,941	+				+0.9
3,827,941	+				+1.9
3,827,941	+				-0.7
3,827,941	+				-0.4
3,827,942	-				-0.1
3,827,942	-				-0.5
3,827,942	-				+1.3
3,827,942	-				+0.2
3,827,951	+				+2.9
3,827,951	+				+0.6
3,827,952	-				+0.2
3,828,006	+				+0.7
3,828,023	+				-0.3
3,828,023	+				+0.6
3,828,023	+				-0.5
3,828,114	+		Sama_3234	0.12	+1.0
3,828,115	-		Sama_3234	0.12	-0.6
3,828,146	+		Sama_3234	0.16	+0.9
3,828,147	-		Sama_3234	0.16	+0.2
3,828,197	-		Sama_3234	0.23	-2.7
3,828,206	+		Sama_3234	0.24	+0.4
3,828,243	-		Sama_3234	0.28	-0.5
3,828,243	-		Sama_3234	0.28	-0.7
3,828,251	+		Sama_3234	0.29	-0.7
3,828,251	+		Sama_3234	0.29	-0.4
3,828,251	+		Sama_3234	0.29	+0.8
3,828,251	+		Sama_3234	0.29	-0.1
3,828,251	+		Sama_3234	0.29	-0.5
3,828,251	+		Sama_3234	0.29	-0.3
3,828,251	+		Sama_3234	0.29	+0.8
3,828,251	+		Sama_3234	0.29	+0.5
3,828,252	-		Sama_3234	0.30	-0.6
3,828,252	-		Sama_3234	0.30	+0.0
3,828,252	-		Sama_3234	0.30	+0.3
3,828,252	-		Sama_3234	0.30	-0.9
3,828,252	-		Sama_3234	0.30	-1.5
3,828,252	-		Sama_3234	0.30	+3.2
3,828,252	-		Sama_3234	0.30	+0.3
3,828,252	-		Sama_3234	0.30	+0.4
3,828,252	-		Sama_3234	0.30	-0.3
3,828,252	-		Sama_3234	0.30	-0.1
3,828,252	-		Sama_3234	0.30	-0.7
3,828,253	+		Sama_3234	0.30	+0.5
3,828,253	+		Sama_3234	0.30	-0.0
3,828,253	+		Sama_3234	0.30	+0.0
3,828,253	+		Sama_3234	0.30	-0.5
3,828,253	+		Sama_3234	0.30	-0.5
3,828,253	+		Sama_3234	0.30	-0.3
3,828,253	+		Sama_3234	0.30	+0.3
3,828,253	+		Sama_3234	0.30	+0.4
3,828,253	+		Sama_3234	0.30	+0.5
3,828,254	-		Sama_3234	0.30	-1.0
3,828,254	-		Sama_3234	0.30	-0.8
3,828,254	-		Sama_3234	0.30	+0.3
3,828,254	-		Sama_3234	0.30	-1.1
3,828,254	-		Sama_3234	0.30	-0.5
3,828,254	-		Sama_3234	0.30	-2.0
3,828,254	-		Sama_3234	0.30	-0.4
3,828,254	-		Sama_3234	0.30	+0.4
3,828,254	-		Sama_3234	0.30	-2.3
3,828,352	+		Sama_3234	0.42	-0.1
3,828,352	+		Sama_3234	0.42	+1.9
3,828,353	-		Sama_3234	0.42	+0.0
3,828,367	+		Sama_3234	0.44	-0.3
3,828,367	+		Sama_3234	0.44	-1.1
3,828,400	-		Sama_3234	0.48	-0.0
3,828,400	-		Sama_3234	0.48	+0.3
3,828,418	+		Sama_3234	0.51	-1.1
3,828,440	-		Sama_3234	0.53	-0.1
3,828,499	-		Sama_3234	0.61	-0.6
3,828,499	-		Sama_3234	0.61	+0.1
3,828,506	-		Sama_3234	0.62	-0.1
3,828,506	-		Sama_3234	0.62	+0.6
3,828,556	+		Sama_3234	0.68	+1.1
3,828,557	-		Sama_3234	0.68	-1.1
3,828,557	-		Sama_3234	0.68	+0.5
3,828,557	-		Sama_3234	0.68	+0.1
3,828,597	+		Sama_3234	0.73	-2.1
3,828,597	+		Sama_3234	0.73	-0.1
3,828,597	+		Sama_3234	0.73	-1.1
3,828,598	-		Sama_3234	0.73	-0.4
3,828,598	-		Sama_3234	0.73	+0.4
3,828,598	-		Sama_3234	0.73	-0.3
3,828,598	-		Sama_3234	0.73	-0.1
3,828,598	-		Sama_3234	0.73	-0.4
3,828,598	-		Sama_3234	0.73	+0.0
3,828,598	-		Sama_3234	0.73	+1.1
3,828,598	-		Sama_3234	0.73	-0.3
3,828,598	-		Sama_3234	0.73	-1.5
3,828,598	-		Sama_3234	0.73	-2.1
3,828,598	-		Sama_3234	0.73	-0.9
3,828,655	+		Sama_3234	0.81	-0.6
3,828,656	-		Sama_3234	0.81	-0.0
3,828,656	-		Sama_3234	0.81	+0.5
3,828,690	+		Sama_3234	0.85	-0.3
3,828,690	+		Sama_3234	0.85	+0.0
3,828,691	-		Sama_3234	0.85	+0.8
3,828,691	-		Sama_3234	0.85	-0.9
3,828,753	-				-0.7
3,828,832	+				+0.0
3,828,833	-				-0.3
3,828,833	-				-0.5
3,828,841	+				-0.0
3,828,841	+				-2.1
3,828,841	+				+0.2
3,828,841	+				+0.9
3,828,841	+				+0.5
3,828,841	+				+0.3
3,828,841	+				-0.1
3,828,841	+				-0.3
3,828,842	-				-1.0
3,828,842	-				+0.5
3,828,842	-				-0.5
3,828,842	-				+0.9
3,828,842	-				+0.7
3,828,845	+				-1.3
3,828,845	+				+1.9
3,828,845	+				-1.4
3,828,846	-				-1.0
3,828,846	-				+0.4
3,828,846	-				+0.6
3,828,846	-				-0.4
3,828,846	-				+1.7
3,828,847	+				-1.5
3,828,848	-				-0.5
3,828,848	-				-0.6
3,828,860	+				-0.7
3,828,887	+				-0.6
3,828,888	-				-0.0
3,828,904	+				+0.0
3,828,905	-				+1.9
3,828,929	-				-1.1
3,828,943	-				+0.4
3,828,963	-				-0.5
3,828,981	+				-0.3
3,828,993	-				+0.3
3,828,993	-				-0.0
3,829,056	+				+0.4
3,829,057	-				-0.4
3,829,057	-				-0.4
3,829,057	-				-0.4
3,829,057	-				-0.3
3,829,057	-				-0.7
3,829,057	-				+1.4
3,829,058	+				-0.5
3,829,058	+				+0.6
3,829,058	+				-0.1
3,829,059	-				-2.6
3,829,059	-				-0.1
3,829,059	-				-0.5
3,829,059	-				-0.1
3,829,059	-				+0.6
3,829,059	-				-0.1
3,829,075	+				+0.0
3,829,075	+				-0.0
3,829,076	-				-2.5
3,829,076	-				+0.7
3,829,076	-				+0.3
3,829,076	-				+0.6
3,829,076	-				-0.6
3,829,076	-				-0.9
3,829,082	+				+1.9
3,829,083	-				+0.8
3,829,083	-				+1.1
3,829,083	-				-0.0
3,829,113	+				-0.5
3,829,113	+				-0.5
3,829,113	+				-0.2
3,829,113	+				-0.2
3,829,113	+				-0.9
3,829,113	+				+0.5
3,829,113	+				-0.6
3,829,113	+				-0.1
3,829,114	-				-0.8
3,829,114	-				-0.7
3,829,114	-				+0.2
3,829,114	-				+0.4
3,829,138	-				+0.5
3,829,138	-				-0.3
3,829,138	-				+1.0
3,829,138	-				-0.5
3,829,152	-				-0.1
3,829,152	-				+0.4
3,829,154	+				+0.1
3,829,154	+				-0.0
3,829,154	+				+0.6
3,829,155	-				-0.7
3,829,155	-				-1.1
3,829,155	-				+0.6
3,829,155	-				-0.7
3,829,155	-				+0.9
3,829,155	-				-0.3
3,829,155	-				+0.7
3,829,155	-				-1.0
3,829,155	-				+0.9
3,829,155	-				-0.1
3,829,158	+				+0.5
3,829,158	+				-0.4
3,829,159	-				+1.4
3,829,159	-				-0.4
3,829,159	-				+0.9
3,829,161	-				-1.4
3,829,169	+				-0.6
3,829,169	+				+0.6
3,829,170	-				-1.3
3,829,208	-		Sama_3235	0.18	-0.1
3,829,269	+		Sama_3235	0.34	+0.1
3,829,269	+		Sama_3235	0.34	+0.6
3,829,269	+		Sama_3235	0.34	+0.7
3,829,269	+		Sama_3235	0.34	+0.3
3,829,269	+		Sama_3235	0.34	-0.3
3,829,269	+		Sama_3235	0.34	-0.7
3,829,270	-		Sama_3235	0.34	+0.5
3,829,270	-		Sama_3235	0.34	-1.6
3,829,270	-		Sama_3235	0.34	-2.1
3,829,270	-		Sama_3235	0.34	+0.1
3,829,270	-		Sama_3235	0.34	+0.9
3,829,378	+		Sama_3235	0.62	-1.3
3,829,378	+		Sama_3235	0.62	+0.3
3,829,378	+		Sama_3235	0.62	-1.0
3,829,378	+		Sama_3235	0.62	+0.2
3,829,378	+		Sama_3235	0.62	+0.5
3,829,379	-		Sama_3235	0.62	+0.7
3,829,379	-		Sama_3235	0.62	+1.9
3,829,379	-		Sama_3235	0.62	+3.7
3,829,379	-		Sama_3235	0.62	-1.3
3,829,379	-		Sama_3235	0.62	-0.1
3,829,396	+		Sama_3235	0.67	-1.4
3,829,396	+		Sama_3235	0.67	+3.4
3,829,396	+		Sama_3235	0.67	-1.5
3,829,396	+		Sama_3235	0.67	+1.0
3,829,396	+		Sama_3235	0.67	-0.1
3,829,396	+		Sama_3235	0.67	+0.1
3,829,396	+		Sama_3235	0.67	+0.9
3,829,397	-		Sama_3235	0.67	+0.0
3,829,397	-		Sama_3235	0.67	-0.1
3,829,397	-		Sama_3235	0.67	+0.7
3,829,397	-		Sama_3235	0.67	+0.3
3,829,397	-		Sama_3235	0.67	+0.1
3,829,397	-		Sama_3235	0.67	-1.0
3,829,397	-		Sama_3235	0.67	+0.5
3,829,402	+		Sama_3235	0.68	+0.3
3,829,402	+		Sama_3235	0.68	+0.4
3,829,402	+		Sama_3235	0.68	+0.4
3,829,402	+		Sama_3235	0.68	+0.2
3,829,403	-		Sama_3235	0.68	+0.2
3,829,403	-		Sama_3235	0.68	-1.3
3,829,403	-		Sama_3235	0.68	+0.4
3,829,403	-		Sama_3235	0.68	+1.0
3,829,403	-		Sama_3235	0.68	-0.2
3,829,403	-		Sama_3235	0.68	+4.2
3,829,440	-		Sama_3235	0.78	-1.2
3,829,440	-		Sama_3235	0.78	+0.5
3,829,440	-		Sama_3235	0.78	+0.9
3,829,440	-		Sama_3235	0.78	-0.5
3,829,440	-		Sama_3235	0.78	-0.8
3,829,455	+		Sama_3235	0.82	-1.3
3,829,455	+		Sama_3235	0.82	-1.0
3,829,456	-		Sama_3235	0.82	-0.1
3,829,501	+				-1.0
3,829,502	-				-1.3
3,829,502	-				-0.8
3,829,502	-				+0.0
3,829,502	-				+0.4
3,829,503	+				-0.7
3,829,504	-				+0.9
3,829,533	+				+0.1
3,829,533	+				-0.1
3,829,533	+				-0.4
3,829,534	-				+0.4
3,829,534	-				+0.7
3,829,570	+				-0.3
3,829,571	-				-0.6
3,829,571	-				-0.4
3,829,651	-				+0.4
3,829,651	-				-0.2
3,829,651	-				-1.0
3,829,681	+				-1.6
3,829,681	+				-0.3
3,829,681	+				-0.7
3,829,681	+				+0.1
3,829,682	-				-0.7
3,829,682	-				+0.1
3,829,682	-				-0.5
3,829,682	-				-0.1
3,829,682	-				+0.9
3,829,778	+				+0.7
3,829,778	+				+0.6
3,829,778	+				+1.1
3,829,779	-				+0.9
3,829,779	-				+1.9
3,829,779	-				-0.5
3,829,779	-				+0.6