Strain Fitness in Shewanella amazonensis SB2B around Sama_2077

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
2,514,308	+		Sama_2075	0.86	-3.0
2,514,322	+		Sama_2075	0.90	+0.2
2,514,349	+				-0.9
2,514,349	+				+0.5
2,514,364	-				+1.4
2,514,458	-				-0.7
2,514,484	+				+1.3
2,514,498	-				+0.3
2,514,517	-				-0.2
2,514,517	-				-0.2
2,514,517	-				-1.2
2,514,528	-				+0.3
2,514,553	+				+0.3
2,514,553	+				-0.1
2,514,554	-				+0.3
2,514,555	+				-1.2
2,514,708	+		Sama_2076	0.26	-3.1
2,514,782	+		Sama_2076	0.37	-3.1
2,514,782	+		Sama_2076	0.37	-2.0
2,514,782	+		Sama_2076	0.37	-3.1
2,514,783	-		Sama_2076	0.37	-1.7
2,514,783	-		Sama_2076	0.37	-0.8
2,514,783	-		Sama_2076	0.37	-2.0
2,514,868	+		Sama_2076	0.49	-2.8
2,514,868	+		Sama_2076	0.49	-3.1
2,514,935	+		Sama_2076	0.58	-0.2
2,514,948	+		Sama_2076	0.60	-0.9
2,514,949	-		Sama_2076	0.60	-1.9
2,514,949	-		Sama_2076	0.60	-2.5
2,515,015	-		Sama_2076	0.69	-2.7
2,515,030	-		Sama_2076	0.71	-0.2
2,515,030	-		Sama_2076	0.71	-2.4
2,515,052	+		Sama_2076	0.74	-1.0
2,515,053	-		Sama_2076	0.74	-0.6
2,515,190	+				+0.6
2,515,328	+				+0.7
2,515,329	-				+0.7
2,515,331	+				+1.0
2,515,332	-				-2.0
2,515,332	-				-0.2
2,515,338	+				-0.0
2,515,339	-				-0.4
2,515,398	+				+1.7
2,515,493	+		Sama_2077	0.15	+0.0
2,515,505	+		Sama_2077	0.16	+0.8
2,515,505	+		Sama_2077	0.16	-0.3
2,515,505	+		Sama_2077	0.16	+0.9
2,515,506	-		Sama_2077	0.16	-0.5
2,515,506	-		Sama_2077	0.16	+0.7
2,515,506	-		Sama_2077	0.16	-0.1
2,515,506	-		Sama_2077	0.16	+1.6
2,515,506	-		Sama_2077	0.16	+0.0
2,515,509	-		Sama_2077	0.16	-1.1
2,515,509	-		Sama_2077	0.16	-1.3
2,515,509	-		Sama_2077	0.16	-0.2
2,515,509	-		Sama_2077	0.16	-0.3
2,515,586	-		Sama_2077	0.22	+0.3
2,515,599	+		Sama_2077	0.23	+0.4
2,515,599	+		Sama_2077	0.23	+1.3
2,515,600	-		Sama_2077	0.23	+0.3
2,515,600	-		Sama_2077	0.23	+3.8
2,515,670	+		Sama_2077	0.29	-0.2
2,515,670	+		Sama_2077	0.29	-0.1
2,515,670	+		Sama_2077	0.29	-0.1
2,515,670	+		Sama_2077	0.29	-1.7
2,515,670	+		Sama_2077	0.29	+0.7
2,515,671	-		Sama_2077	0.29	+1.7
2,515,693	-		Sama_2077	0.30	+0.0
2,515,693	-		Sama_2077	0.30	-0.4
2,515,693	-		Sama_2077	0.30	-0.4
2,515,711	-		Sama_2077	0.32	+0.2
2,515,722	-		Sama_2077	0.33	-1.4
2,515,730	-		Sama_2077	0.33	-1.5
2,515,745	+		Sama_2077	0.34	-1.1
2,515,745	+		Sama_2077	0.34	-1.3
2,515,746	-		Sama_2077	0.35	-0.3
2,515,746	-		Sama_2077	0.35	-0.7
2,515,746	-		Sama_2077	0.35	+0.0
2,515,799	-		Sama_2077	0.39	-2.5
2,515,799	-		Sama_2077	0.39	+0.1
2,515,799	-		Sama_2077	0.39	+0.7
2,515,799	-		Sama_2077	0.39	+1.2
2,515,799	-		Sama_2077	0.39	-0.7
2,515,831	+		Sama_2077	0.41	+1.6
2,515,832	-		Sama_2077	0.41	-0.0
2,515,832	-		Sama_2077	0.41	-0.3
2,515,832	-		Sama_2077	0.41	-0.3
2,515,868	+		Sama_2077	0.44	+1.0
2,515,957	+		Sama_2077	0.51	+0.3
2,515,965	+		Sama_2077	0.52	-3.7
2,515,965	+		Sama_2077	0.52	+1.3
2,515,966	-		Sama_2077	0.52	+0.3
2,515,966	-		Sama_2077	0.52	+1.6
2,515,966	-		Sama_2077	0.52	-1.4
2,516,053	-		Sama_2077	0.58	-1.2
2,516,072	+		Sama_2077	0.60	-0.6
2,516,090	+		Sama_2077	0.61	+0.6
2,516,169	+		Sama_2077	0.67	+0.6
2,516,170	-		Sama_2077	0.67	-1.7
2,516,170	-		Sama_2077	0.67	+0.3
2,516,170	-		Sama_2077	0.67	-1.3
2,516,195	+		Sama_2077	0.69	-0.9
2,516,196	-		Sama_2077	0.69	+1.4
2,516,235	+		Sama_2077	0.72	+1.0
2,516,240	+		Sama_2077	0.73	+0.7
2,516,240	+		Sama_2077	0.73	-0.5
2,516,240	+		Sama_2077	0.73	-0.3
2,516,241	-		Sama_2077	0.73	+2.2
2,516,245	-		Sama_2077	0.73	+0.3
2,516,245	-		Sama_2077	0.73	+0.7
2,516,266	-		Sama_2077	0.75	-1.4
2,516,297	+		Sama_2077	0.77	-1.7
2,516,297	+		Sama_2077	0.77	-1.0
2,516,297	+		Sama_2077	0.77	+0.6
2,516,297	+		Sama_2077	0.77	-0.3
2,516,298	-		Sama_2077	0.77	-1.3
2,516,413	-		Sama_2077	0.86	-0.7
2,516,436	+		Sama_2077	0.88	+0.8
2,516,436	+		Sama_2077	0.88	-0.5
2,516,436	+		Sama_2077	0.88	+1.3
2,516,437	-		Sama_2077	0.88	-1.3
2,516,437	-		Sama_2077	0.88	+0.3
2,516,437	-		Sama_2077	0.88	-0.4
2,516,437	-		Sama_2077	0.88	+0.0
2,516,437	-		Sama_2077	0.88	+0.3
2,516,438	+		Sama_2077	0.88	-1.0
2,516,535	-				+1.0
2,516,564	+				+2.1
2,516,564	+				+1.9
2,516,564	+				-0.7
2,516,564	+				+0.1
2,516,567	+				-1.1
2,516,568	-				+0.2
2,516,568	-				+0.7
2,516,568	-				-0.3
2,516,635	+				+0.7
2,516,635	+				-0.3
2,516,681	-				+1.0
2,516,718	-				+0.2
2,516,756	-				+0.3
2,516,756	-				-1.3
2,516,798	+				-2.3
2,516,814	-				-1.0
2,516,814	-				-1.7
2,516,814	-				-2.6
2,516,814	-				-4.1
2,516,815	+				-0.3
2,516,815	+				-2.3
2,516,815	+				-1.7
2,516,815	+				-2.3
2,516,816	-				+0.9
2,516,816	-				-0.8
2,516,816	-				-2.5
2,516,816	-				-0.3
2,516,816	-				-2.3
2,516,816	-				-3.1
2,516,835	+				-1.7
2,516,835	+				-0.3
2,516,928	+				-1.7
2,516,928	+				-1.0
2,516,928	+				-4.5
2,516,929	-				-2.7
2,516,929	-				-3.5
2,516,929	-				-2.1
2,516,929	-				-1.3
2,516,929	-				-1.7
2,516,970	+				-1.3
2,516,971	-				-3.1
2,516,971	-				-0.3
2,516,971	-				-1.2
2,516,971	-				-2.5
2,516,971	-				-3.5
2,516,971	-				-2.5
2,516,971	-				-2.1
2,516,971	-				-1.8
2,516,971	-				-2.0
2,516,971	-				-2.3
2,516,971	-				-1.9
2,517,084	-				-2.0
2,517,084	-				-1.2
2,517,084	-				-2.0
2,517,176	+		Sama_2078	0.12	-1.7
2,517,194	+		Sama_2078	0.13	-3.1
2,517,195	-		Sama_2078	0.13	-2.4
2,517,259	-		Sama_2078	0.15	-1.8
2,517,259	-		Sama_2078	0.15	-1.0
2,517,330	-		Sama_2078	0.17	-2.3
2,517,367	-		Sama_2078	0.18	-1.1
2,517,367	-		Sama_2078	0.18	-2.8
2,517,367	-		Sama_2078	0.18	-0.9
2,517,451	+		Sama_2078	0.20	-2.0
2,517,452	-		Sama_2078	0.20	-0.9