Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32010

Experiment: m.b. 2-Furfuraldehyde 0.016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 2-Furfuraldehyde 0.016 vol%
3,354,123	-		PGA1_c31990	0.89	-0.2
3,354,183	+				+0.2
3,354,183	+				-0.7
3,354,183	+				-0.8
3,354,183	+				-0.7
3,354,183	+				-0.1
3,354,186	-				-0.2
3,354,191	-				+0.2
3,354,193	+				+0.3
3,354,193	+				+0.8
3,354,193	+				-0.4
3,354,193	+				-0.8
3,354,193	+				+1.8
3,354,201	-				-1.2
3,354,201	-				-0.2
3,354,201	-				-1.2
3,354,201	-				-0.8
3,354,260	-				-2.0
3,354,293	+				-1.8
3,354,301	-				-0.7
3,354,301	-				-1.1
3,354,332	+				+0.2
3,354,352	+				+0.0
3,354,368	+				-1.0
3,354,412	-				-0.2
3,354,415	+				-1.6
3,354,422	-				-0.7
3,354,422	-				-0.2
3,354,422	-				-1.2
3,354,423	-				-2.0
3,354,440	-		PGA1_c32000	0.11	-1.6
3,354,450	+		PGA1_c32000	0.13	+0.8
3,354,452	-		PGA1_c32000	0.13	-0.2
3,354,525	-		PGA1_c32000	0.29	+0.2
3,354,557	+		PGA1_c32000	0.36	-1.0
3,354,558	-		PGA1_c32000	0.36	-0.8
3,354,589	+		PGA1_c32000	0.43	+1.3
3,354,589	+		PGA1_c32000	0.43	-1.6
3,354,589	+		PGA1_c32000	0.43	-1.0
3,354,597	-		PGA1_c32000	0.45	-0.3
3,354,639	+		PGA1_c32000	0.54	-0.0
3,354,639	+		PGA1_c32000	0.54	-0.5
3,354,642	-		PGA1_c32000	0.54	-1.6
3,354,644	+		PGA1_c32000	0.55	+0.6
3,354,647	-		PGA1_c32000	0.55	-1.2
3,354,647	-		PGA1_c32000	0.55	-1.3
3,354,665	-		PGA1_c32000	0.59	-2.3
3,354,683	+		PGA1_c32000	0.63	-0.6
3,354,683	+		PGA1_c32000	0.63	+0.2
3,354,683	+		PGA1_c32000	0.63	-0.1
3,354,691	-		PGA1_c32000	0.65	-1.2
3,354,757	-		PGA1_c32000	0.79	-1.0
3,354,793	+		PGA1_c32000	0.87	-0.6
3,354,801	-		PGA1_c32000	0.88	-0.5
3,354,801	-		PGA1_c32000	0.88	-0.7
3,354,815	-				-1.2
3,354,819	+				+0.3
3,354,853	+				-0.8
3,354,861	-				-0.6
3,354,884	-				+0.3
3,354,884	-				-1.6
3,354,945	-				-1.2
3,354,945	-				-0.4
3,354,946	-				+0.3
3,355,031	-				-2.4
3,355,039	-				-0.3
3,355,050	-				+0.1
3,355,088	+				+0.6
3,355,089	+				-0.2
3,355,182	-		PGA1_c32010	0.13	+0.0
3,355,182	-		PGA1_c32010	0.13	-0.0
3,355,193	+		PGA1_c32010	0.15	-1.8
3,355,193	+		PGA1_c32010	0.15	-1.6
3,355,284	-		PGA1_c32010	0.31	-0.6
3,355,373	+		PGA1_c32010	0.47	-0.7
3,355,460	+		PGA1_c32010	0.63	-0.8
3,355,470	-		PGA1_c32010	0.65	-0.2
3,355,495	+		PGA1_c32010	0.70	-0.2
3,355,524	+		PGA1_c32010	0.75	+0.8
3,355,530	-		PGA1_c32010	0.76	+0.8
3,355,556	+		PGA1_c32010	0.81	+0.4
3,355,559	-		PGA1_c32010	0.81	-0.3
3,355,583	+		PGA1_c32010	0.86	-1.5
3,355,584	+		PGA1_c32010	0.86	-1.2
3,355,624	+				-0.2
3,355,629	+				-0.9
3,355,639	-				+0.8
3,355,725	-				-1.2
3,355,810	+				-0.6
3,355,810	+				-1.2
3,355,810	+				+0.8
3,355,810	+				+0.0
3,355,818	-				-0.4
3,355,818	-				+0.4
3,355,818	-				-0.8
3,355,818	-				-0.2
3,355,818	-				+0.2
3,355,818	-				-0.3
3,355,818	-				-0.7
3,355,818	-				-2.8
3,355,818	-				-0.2
3,355,838	-				+0.8
3,355,931	-		PGA1_c32020	0.13	-1.5
3,355,984	+		PGA1_c32020	0.18	+0.9
3,356,002	-		PGA1_c32020	0.19	-3.2
3,356,002	-		PGA1_c32020	0.19	-0.8
3,356,002	-		PGA1_c32020	0.19	-1.0
3,356,023	-		PGA1_c32020	0.21	+0.0
3,356,034	+		PGA1_c32020	0.21	+0.5
3,356,034	+		PGA1_c32020	0.21	-0.6
3,356,042	-		PGA1_c32020	0.22	-1.6
3,356,042	-		PGA1_c32020	0.22	+0.0
3,356,042	-		PGA1_c32020	0.22	-0.0
3,356,068	-		PGA1_c32020	0.24	+0.0
3,356,126	+		PGA1_c32020	0.29	-1.2
3,356,131	-		PGA1_c32020	0.29	-1.7
3,356,156	-		PGA1_c32020	0.31	-0.7
3,356,216	+		PGA1_c32020	0.36	-0.0
3,356,253	+		PGA1_c32020	0.39	-0.6
3,356,276	-		PGA1_c32020	0.41	+1.1
3,356,311	+		PGA1_c32020	0.44	+0.2
3,356,429	+		PGA1_c32020	0.53	-0.0
3,356,481	+		PGA1_c32020	0.57	+2.3
3,356,481	+		PGA1_c32020	0.57	+0.8
3,356,489	-		PGA1_c32020	0.58	-0.7
3,356,489	-		PGA1_c32020	0.58	+0.5
3,356,504	-		PGA1_c32020	0.59	-0.0
3,356,564	+		PGA1_c32020	0.64	+1.0
3,356,564	+		PGA1_c32020	0.64	+0.3
3,356,630	+		PGA1_c32020	0.69	+0.5
3,356,644	+		PGA1_c32020	0.70	-0.4
3,356,644	+		PGA1_c32020	0.70	-0.3