Experiment: Anaerobic growth in rich media with nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1751 and Dsui_1752 are separated by 60 nucleotides Dsui_1752 and Dsui_1753 are separated by 49 nucleotides
Dsui_1751: Dsui_1751 - flagellar hook-length control protein, at 1,837,499 to 1,838,620
_1751
Dsui_1752: Dsui_1752 - flagellar export protein FliJ, at 1,838,681 to 1,839,133
_1752
Dsui_1753: Dsui_1753 - flagellar protein export ATPase FliI, at 1,839,183 to 1,840,598
_1753
Position (kb)
1838
1839
1840 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1837.681 kb on + strand at 1837.706 kb on - strand, within Dsui_1751 at 1837.718 kb on - strand, within Dsui_1751 at 1837.762 kb on + strand, within Dsui_1751 at 1837.765 kb on - strand, within Dsui_1751 at 1837.775 kb on - strand, within Dsui_1751 at 1837.787 kb on - strand, within Dsui_1751 at 1837.787 kb on - strand, within Dsui_1751 at 1837.820 kb on - strand, within Dsui_1751 at 1837.829 kb on - strand, within Dsui_1751 at 1837.829 kb on - strand, within Dsui_1751 at 1837.845 kb on - strand, within Dsui_1751 at 1837.927 kb on - strand, within Dsui_1751 at 1837.976 kb on + strand, within Dsui_1751 at 1838.061 kb on - strand, within Dsui_1751 at 1838.065 kb on + strand, within Dsui_1751 at 1838.132 kb on + strand, within Dsui_1751 at 1838.132 kb on + strand, within Dsui_1751 at 1838.167 kb on + strand, within Dsui_1751 at 1838.321 kb on + strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.510 kb on + strand at 1838.605 kb on + strand at 1838.613 kb on - strand at 1838.613 kb on - strand at 1838.703 kb on + strand at 1838.850 kb on + strand at 1838.850 kb on + strand, within Dsui_1752 at 1838.948 kb on + strand, within Dsui_1752 at 1839.032 kb on - strand, within Dsui_1752 at 1839.147 kb on - strand at 1839.167 kb on - strand at 1839.241 kb on + strand at 1839.242 kb on + strand at 1839.250 kb on - strand at 1839.312 kb on - strand at 1839.347 kb on + strand at 1839.347 kb on + strand at 1839.347 kb on + strand, within Dsui_1753 at 1839.355 kb on - strand, within Dsui_1753 at 1839.378 kb on - strand, within Dsui_1753 at 1839.380 kb on + strand at 1839.397 kb on + strand, within Dsui_1753 at 1839.398 kb on - strand, within Dsui_1753 at 1839.407 kb on + strand, within Dsui_1753 at 1839.422 kb on + strand, within Dsui_1753 at 1839.430 kb on - strand, within Dsui_1753 at 1839.496 kb on - strand, within Dsui_1753 at 1839.531 kb on - strand, within Dsui_1753 at 1839.566 kb on + strand, within Dsui_1753 at 1839.577 kb on + strand, within Dsui_1753 at 1839.585 kb on - strand, within Dsui_1753 at 1839.760 kb on + strand, within Dsui_1753 at 1839.938 kb on - strand, within Dsui_1753 at 1839.973 kb on + strand, within Dsui_1753 at 1840.026 kb on + strand, within Dsui_1753
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with nitrate electron acceptor remove 1,837,681 + +3.7 1,837,706 - Dsui_1751 0.18 -0.8 1,837,718 - Dsui_1751 0.20 -0.9 1,837,762 + Dsui_1751 0.23 -1.5 1,837,765 - Dsui_1751 0.24 -0.1 1,837,775 - Dsui_1751 0.25 -0.0 1,837,787 - Dsui_1751 0.26 -0.1 1,837,787 - Dsui_1751 0.26 -1.4 1,837,820 - Dsui_1751 0.29 -0.4 1,837,829 - Dsui_1751 0.29 -0.9 1,837,829 - Dsui_1751 0.29 -0.1 1,837,845 - Dsui_1751 0.31 +0.2 1,837,927 - Dsui_1751 0.38 -0.4 1,837,976 + Dsui_1751 0.43 -1.2 1,838,061 - Dsui_1751 0.50 -0.4 1,838,065 + Dsui_1751 0.50 -1.4 1,838,132 + Dsui_1751 0.56 -0.8 1,838,132 + Dsui_1751 0.56 -2.5 1,838,167 + Dsui_1751 0.60 -1.4 1,838,321 + Dsui_1751 0.73 -0.8 1,838,322 - Dsui_1751 0.73 +0.3 1,838,322 - Dsui_1751 0.73 -0.5 1,838,322 - Dsui_1751 0.73 +0.4 1,838,510 + -1.4 1,838,605 + -0.8 1,838,613 - -0.6 1,838,613 - -0.6 1,838,703 + -0.3 1,838,850 + +0.2 1,838,850 + Dsui_1752 0.37 -0.8 1,838,948 + Dsui_1752 0.59 -1.5 1,839,032 - Dsui_1752 0.77 -0.6 1,839,147 - -0.5 1,839,167 - +0.1 1,839,241 + +0.4 1,839,242 + -0.9 1,839,250 - -0.3 1,839,312 - -0.4 1,839,347 + -0.2 1,839,347 + -0.2 1,839,347 + Dsui_1753 0.12 +0.7 1,839,355 - Dsui_1753 0.12 +0.1 1,839,378 - Dsui_1753 0.14 -0.2 1,839,380 + -0.4 1,839,397 + Dsui_1753 0.15 -0.8 1,839,398 - Dsui_1753 0.15 -0.8 1,839,407 + Dsui_1753 0.16 -1.0 1,839,422 + Dsui_1753 0.17 -0.9 1,839,430 - Dsui_1753 0.17 -0.8 1,839,496 - Dsui_1753 0.22 -0.6 1,839,531 - Dsui_1753 0.25 +0.2 1,839,566 + Dsui_1753 0.27 -1.3 1,839,577 + Dsui_1753 0.28 -1.6 1,839,585 - Dsui_1753 0.28 -0.6 1,839,760 + Dsui_1753 0.41 -1.3 1,839,938 - Dsui_1753 0.53 +0.3 1,839,973 + Dsui_1753 0.56 +0.2 1,840,026 + Dsui_1753 0.60 +0.5
Or see this region's nucleotide sequence