Strain Fitness in Dechlorosoma suillum PS around Dsui_0717

Experiment: Anaerobic growth in rich media with nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0715 and Dsui_0716 are separated by 5 nucleotidesDsui_0716 and Dsui_0717 are separated by 117 nucleotidesDsui_0717 and Dsui_0718 are separated by 150 nucleotides Dsui_0715: Dsui_0715 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 708,526 to 709,647 _0715 Dsui_0716: Dsui_0716 - riboflavin synthase, alpha subunit, at 709,653 to 710,255 _0716 Dsui_0717: Dsui_0717 - GTP cyclohydrolase II, at 710,373 to 710,996 _0717 Dsui_0718: Dsui_0718 - thiol:disulfide interchange protein, at 711,147 to 712,931 _0718 Position (kb) 710 711Strain fitness (log2 ratio) -1 0 1 2at 710.333 kb on - strandat 710.379 kb on - strandat 710.389 kb on - strandat 710.993 kb on - strandat 711.025 kb on + strandat 711.040 kb on - strandat 711.056 kb on - strandat 711.059 kb on + strandat 711.084 kb on + strandat 711.092 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with nitrate electron acceptor
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710,333 - -0.4
710,379 - -0.2
710,389 - +0.2
710,993 - -1.2
711,025 + +2.1
711,040 - -0.9
711,056 - +0.1
711,059 + -0.2
711,084 + +1.0
711,092 - +1.0

Or see this region's nucleotide sequence