Strain Fitness in Shewanella amazonensis SB2B around Sama_2452

Experiment: Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine
2,954,318	+		Sama_2451	0.65	+0.6
2,954,344	+		Sama_2451	0.66	+0.9
2,954,345	-		Sama_2451	0.66	-2.5
2,954,501	+		Sama_2451	0.72	-0.3
2,954,546	+		Sama_2451	0.74	+0.3
2,954,546	+		Sama_2451	0.74	+0.0
2,954,547	-		Sama_2451	0.74	-0.7
2,954,547	-		Sama_2451	0.74	+0.7
2,954,547	-		Sama_2451	0.74	-1.0
2,954,572	+		Sama_2451	0.75	-2.2
2,954,572	+		Sama_2451	0.75	+0.5
2,954,572	+		Sama_2451	0.75	-0.8
2,954,572	+		Sama_2451	0.75	-0.4
2,954,572	+		Sama_2451	0.75	-0.7
2,954,572	+		Sama_2451	0.75	-0.4
2,954,572	+		Sama_2451	0.75	+0.8
2,954,573	-		Sama_2451	0.75	-0.1
2,954,573	-		Sama_2451	0.75	+0.2
2,954,573	-		Sama_2451	0.75	-1.8
2,954,573	-		Sama_2451	0.75	-0.1
2,954,573	-		Sama_2451	0.75	-0.9
2,954,573	-		Sama_2451	0.75	+0.8
2,954,573	-		Sama_2451	0.75	-1.7
2,954,573	-		Sama_2451	0.75	+0.5
2,954,573	-		Sama_2451	0.75	+1.8
2,954,573	-		Sama_2451	0.75	-0.2
2,954,573	-		Sama_2451	0.75	-1.6
2,954,582	+		Sama_2451	0.75	-0.5
2,954,583	-		Sama_2451	0.75	-0.4
2,954,670	+		Sama_2451	0.79	+0.5
2,954,670	+		Sama_2451	0.79	+0.5
2,954,670	+		Sama_2451	0.79	+1.2
2,954,670	+		Sama_2451	0.79	+1.4
2,954,670	+		Sama_2451	0.79	-0.8
2,954,671	-		Sama_2451	0.79	-0.3
2,954,671	-		Sama_2451	0.79	+0.4
2,954,677	+		Sama_2451	0.79	+0.2
2,954,854	+		Sama_2451	0.86	-0.0
2,954,854	+		Sama_2451	0.86	-0.8
2,954,947	+				-0.4
2,954,947	+				-1.5
2,954,947	+				+0.4
2,954,947	+				+0.4
2,954,947	+				+0.3
2,954,948	-				-0.6
2,954,948	-				+0.3
2,955,082	+				+1.2
2,955,082	+				+1.0
2,955,083	-				-0.7
2,955,083	-				-0.3
2,955,252	+				-2.4
2,955,252	+				-0.6
2,955,253	-				-1.9
2,955,253	-				-1.2
2,955,303	+				-0.5
2,955,304	-				-1.8
2,955,448	-		Sama_2452	0.12	-1.0
2,955,555	+		Sama_2452	0.17	-0.1
2,955,555	+		Sama_2452	0.17	+0.0
2,955,555	+		Sama_2452	0.17	-1.2
2,955,555	+		Sama_2452	0.17	-3.8
2,955,555	+		Sama_2452	0.17	-0.2
2,955,556	-		Sama_2452	0.17	+1.0
2,955,556	-		Sama_2452	0.17	-2.4
2,955,556	-		Sama_2452	0.17	-0.6
2,955,556	-		Sama_2452	0.17	-2.4
2,955,557	+		Sama_2452	0.17	-1.1
2,955,557	+		Sama_2452	0.17	-1.8
2,955,557	+		Sama_2452	0.17	+1.2
2,955,557	+		Sama_2452	0.17	-1.5
2,955,557	+		Sama_2452	0.17	+0.4
2,955,558	-		Sama_2452	0.17	-1.1
2,955,558	-		Sama_2452	0.17	-2.0
2,955,558	-		Sama_2452	0.17	+0.4
2,955,594	+		Sama_2452	0.19	+0.8
2,955,601	-		Sama_2452	0.19	+0.9
2,955,601	-		Sama_2452	0.19	-0.0
2,955,677	+		Sama_2452	0.23	+1.0
2,955,677	+		Sama_2452	0.23	+0.7
2,955,677	+		Sama_2452	0.23	-1.7
2,955,677	+		Sama_2452	0.23	+1.9
2,955,678	-		Sama_2452	0.23	-2.3
2,955,678	-		Sama_2452	0.23	-1.8
2,955,899	+		Sama_2452	0.34	+0.1
2,956,070	+		Sama_2452	0.42	-2.5
2,956,070	+		Sama_2452	0.42	-0.4
2,956,070	+		Sama_2452	0.42	+1.6
2,956,070	+		Sama_2452	0.42	-0.2
2,956,071	-		Sama_2452	0.42	-1.5
2,956,071	-		Sama_2452	0.42	+0.2
2,956,071	-		Sama_2452	0.42	-2.9
2,956,071	-		Sama_2452	0.42	-1.2
2,956,071	-		Sama_2452	0.42	-1.0
2,956,071	-		Sama_2452	0.42	-0.2
2,956,071	-		Sama_2452	0.42	-1.4
2,956,074	+		Sama_2452	0.42	+0.8
2,956,074	+		Sama_2452	0.42	+0.3
2,956,074	+		Sama_2452	0.42	-0.2
2,956,074	+		Sama_2452	0.42	+0.0
2,956,074	+		Sama_2452	0.42	-2.4
2,956,074	+		Sama_2452	0.42	+0.4
2,956,075	-		Sama_2452	0.42	-0.7
2,956,075	-		Sama_2452	0.42	+0.5
2,956,075	-		Sama_2452	0.42	+0.9
2,956,075	-		Sama_2452	0.42	+0.3
2,956,075	-		Sama_2452	0.42	-0.8
2,956,075	-		Sama_2452	0.42	-0.4
2,956,075	-		Sama_2452	0.42	-1.1
2,956,075	-		Sama_2452	0.42	-1.4
2,956,153	-		Sama_2452	0.46	-0.0
2,956,168	-		Sama_2452	0.47	+0.5
2,956,230	+		Sama_2452	0.50	+0.2
2,956,373	+		Sama_2452	0.56	+0.1
2,956,373	+		Sama_2452	0.56	-0.5
2,956,373	+		Sama_2452	0.56	+0.4
2,956,373	+		Sama_2452	0.56	-0.4
2,956,374	-		Sama_2452	0.56	+0.2
2,956,374	-		Sama_2452	0.56	-1.5
2,956,374	-		Sama_2452	0.56	-0.2
2,956,397	+		Sama_2452	0.58	+0.3
2,956,397	+		Sama_2452	0.58	-0.2
2,956,400	+		Sama_2452	0.58	+1.5
2,956,400	+		Sama_2452	0.58	-0.2
2,956,400	+		Sama_2452	0.58	-1.1
2,956,400	+		Sama_2452	0.58	+0.4
2,956,430	+		Sama_2452	0.59	+0.2
2,956,430	+		Sama_2452	0.59	-0.2
2,956,430	+		Sama_2452	0.59	-0.6
2,956,430	+		Sama_2452	0.59	-0.0
2,956,430	+		Sama_2452	0.59	-0.3
2,956,431	-		Sama_2452	0.59	+0.3
2,956,432	+		Sama_2452	0.59	+1.3
2,956,469	+		Sama_2452	0.61	-1.2
2,956,469	+		Sama_2452	0.61	+0.8
2,956,470	-		Sama_2452	0.61	+0.1
2,956,547	+		Sama_2452	0.65	+0.7
2,956,581	+		Sama_2452	0.66	+0.8
2,956,582	-		Sama_2452	0.67	+0.4
2,956,582	-		Sama_2452	0.67	-1.9
2,956,582	-		Sama_2452	0.67	-1.0
2,956,582	-		Sama_2452	0.67	+0.1
2,956,582	-		Sama_2452	0.67	-0.2
2,956,582	-		Sama_2452	0.67	+1.8
2,956,584	-		Sama_2452	0.67	+0.4
2,956,584	-		Sama_2452	0.67	-0.1
2,956,584	-		Sama_2452	0.67	+1.8
2,956,584	-		Sama_2452	0.67	-1.0
2,956,592	+		Sama_2452	0.67	-0.3
2,956,593	-		Sama_2452	0.67	-1.2
2,956,615	+		Sama_2452	0.68	+1.5
2,956,615	+		Sama_2452	0.68	-1.1
2,956,615	+		Sama_2452	0.68	+0.6
2,956,616	-		Sama_2452	0.68	-1.5
2,956,616	-		Sama_2452	0.68	+1.1
2,956,616	-		Sama_2452	0.68	-0.8
2,956,685	+		Sama_2452	0.71	-0.2
2,956,685	+		Sama_2452	0.71	-3.5
2,956,685	+		Sama_2452	0.71	-0.5
2,956,686	-		Sama_2452	0.72	-1.1
2,956,686	-		Sama_2452	0.72	+0.4
2,956,686	-		Sama_2452	0.72	+1.0
2,956,784	+		Sama_2452	0.76	-0.4
2,956,784	+		Sama_2452	0.76	-0.0
2,956,991	+		Sama_2452	0.86	+2.2
2,956,992	-		Sama_2452	0.86	-0.9
2,956,992	-		Sama_2452	0.86	+0.2
2,957,069	+				-1.8
2,957,070	-				+0.1
2,957,070	-				-0.4
2,957,070	-				+0.8
2,957,070	-				+0.2
2,957,165	-				+0.0
2,957,275	-				-1.8
2,957,275	-				+1.3
2,957,345	+				-1.3
2,957,345	+				+3.0
2,957,357	+				+0.3
2,957,369	+				-0.4
2,957,405	+				+0.4
2,957,432	+				-0.8
2,957,433	-				+0.3
2,957,433	-				+0.4
2,957,544	+		Sama_2453	0.11	-1.1
2,957,679	+		Sama_2453	0.16	-0.2
2,957,679	+		Sama_2453	0.16	+1.4
2,957,679	+		Sama_2453	0.16	+0.6
2,957,679	+		Sama_2453	0.16	-0.2
2,957,680	-		Sama_2453	0.16	-3.4
2,957,680	-		Sama_2453	0.16	-1.5
2,957,680	-		Sama_2453	0.16	-0.9
2,957,680	-		Sama_2453	0.16	-1.2
2,957,680	-		Sama_2453	0.16	+1.0
2,957,680	-		Sama_2453	0.16	+1.4
2,957,680	-		Sama_2453	0.16	-2.5
2,957,680	-		Sama_2453	0.16	-1.4
2,957,716	+		Sama_2453	0.18	-0.3
2,957,716	+		Sama_2453	0.18	-0.5
2,957,736	-		Sama_2453	0.18	-1.8
2,957,736	-		Sama_2453	0.18	-1.2
2,957,777	+		Sama_2453	0.20	+0.5
2,957,854	+		Sama_2453	0.23	-1.2
2,957,854	+		Sama_2453	0.23	+0.1
2,957,855	-		Sama_2453	0.23	-0.5
2,957,855	-		Sama_2453	0.23	+0.6
2,957,925	+		Sama_2453	0.26	+0.3
2,957,926	-		Sama_2453	0.26	-0.7
2,957,926	-		Sama_2453	0.26	-0.2
2,957,942	-		Sama_2453	0.27	-0.7
2,957,992	+		Sama_2453	0.29	-0.0
2,957,993	-		Sama_2453	0.29	+0.2
2,957,993	-		Sama_2453	0.29	+1.2
2,957,993	-		Sama_2453	0.29	+0.2
2,958,062	+		Sama_2453	0.31	-0.2
2,958,062	+		Sama_2453	0.31	-0.8
2,958,095	+		Sama_2453	0.33	+1.4
2,958,095	+		Sama_2453	0.33	-1.5
2,958,095	+		Sama_2453	0.33	-0.2
2,958,095	+		Sama_2453	0.33	+0.8
2,958,095	+		Sama_2453	0.33	-0.8
2,958,095	+		Sama_2453	0.33	-0.1
2,958,095	+		Sama_2453	0.33	+0.1
2,958,095	+		Sama_2453	0.33	-1.0
2,958,095	+		Sama_2453	0.33	+0.8
2,958,095	+		Sama_2453	0.33	+0.1
2,958,095	+		Sama_2453	0.33	-1.5
2,958,095	+		Sama_2453	0.33	-1.3
2,958,095	+		Sama_2453	0.33	+0.5
2,958,096	-		Sama_2453	0.33	-0.7
2,958,096	-		Sama_2453	0.33	-0.8
2,958,096	-		Sama_2453	0.33	+0.4
2,958,096	-		Sama_2453	0.33	-1.2
2,958,096	-		Sama_2453	0.33	-1.1
2,958,096	-		Sama_2453	0.33	-0.1
2,958,096	-		Sama_2453	0.33	+0.5
2,958,096	-		Sama_2453	0.33	-0.1
2,958,096	-		Sama_2453	0.33	-0.2
2,958,096	-		Sama_2453	0.33	-1.2
2,958,096	-		Sama_2453	0.33	+0.8
2,958,096	-		Sama_2453	0.33	+0.1
2,958,096	-		Sama_2453	0.33	-2.5
2,958,096	-		Sama_2453	0.33	-0.1
2,958,096	-		Sama_2453	0.33	+0.0
2,958,096	-		Sama_2453	0.33	+1.3
2,958,096	-		Sama_2453	0.33	+0.7
2,958,096	-		Sama_2453	0.33	-0.6
2,958,096	-		Sama_2453	0.33	-1.2
2,958,097	+		Sama_2453	0.33	-0.2
2,958,097	+		Sama_2453	0.33	-2.0
2,958,097	+		Sama_2453	0.33	-1.0
2,958,098	-		Sama_2453	0.33	-2.0
2,958,098	-		Sama_2453	0.33	+0.3
2,958,103	+		Sama_2453	0.33	+0.8
2,958,106	+		Sama_2453	0.33	-0.0
2,958,106	+		Sama_2453	0.33	+0.6
2,958,106	+		Sama_2453	0.33	-2.8
2,958,107	-		Sama_2453	0.33	+2.1
2,958,107	-		Sama_2453	0.33	-0.8
2,958,107	-		Sama_2453	0.33	+1.5
2,958,107	-		Sama_2453	0.33	-1.9
2,958,206	+		Sama_2453	0.37	+1.4
2,958,206	+		Sama_2453	0.37	-0.2
2,958,206	+		Sama_2453	0.37	+0.4
2,958,206	+		Sama_2453	0.37	-1.5
2,958,206	+		Sama_2453	0.37	-0.8
2,958,206	+		Sama_2453	0.37	-0.2
2,958,207	-		Sama_2453	0.37	-0.4
2,958,207	-		Sama_2453	0.37	+0.1
2,958,226	+		Sama_2453	0.38	-1.0
2,958,226	+		Sama_2453	0.38	+0.5
2,958,226	+		Sama_2453	0.38	-0.8
2,958,226	+		Sama_2453	0.38	+0.6
2,958,227	-		Sama_2453	0.38	-0.5
2,958,227	-		Sama_2453	0.38	+0.3
2,958,227	-		Sama_2453	0.38	-0.2
2,958,227	-		Sama_2453	0.38	-0.6