Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09590 and PGA1_c09600 are separated by 75 nucleotides PGA1_c09600 and PGA1_c09610 are separated by 19 nucleotides
PGA1_c09590: PGA1_c09590 - uncharacterized protein YhiN, at 983,252 to 984,433
_c09590
PGA1_c09600: PGA1_c09600 - cell division protein ftsW, at 984,509 to 985,777
_c09600
PGA1_c09610: PGA1_c09610 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG, at 985,797 to 986,894
_c09610
Position (kb) 984
985
986 Strain fitness (log2 ratio) -2
-1
0
1
2 at 983.519 kb on + strand, within PGA1_c09590 at 983.538 kb on + strand, within PGA1_c09590 at 983.539 kb on + strand, within PGA1_c09590 at 983.672 kb on + strand, within PGA1_c09590 at 983.687 kb on + strand, within PGA1_c09590 at 983.695 kb on - strand, within PGA1_c09590 at 983.695 kb on - strand, within PGA1_c09590 at 983.741 kb on - strand, within PGA1_c09590 at 983.743 kb on + strand, within PGA1_c09590 at 983.798 kb on - strand, within PGA1_c09590 at 983.798 kb on - strand, within PGA1_c09590 at 983.809 kb on + strand, within PGA1_c09590 at 983.817 kb on - strand, within PGA1_c09590 at 983.817 kb on - strand, within PGA1_c09590 at 983.876 kb on - strand, within PGA1_c09590 at 983.916 kb on - strand, within PGA1_c09590 at 983.936 kb on - strand, within PGA1_c09590 at 983.982 kb on + strand, within PGA1_c09590 at 984.036 kb on - strand, within PGA1_c09590 at 984.050 kb on + strand, within PGA1_c09590 at 984.073 kb on + strand, within PGA1_c09590 at 984.138 kb on + strand, within PGA1_c09590 at 984.381 kb on + strand at 984.386 kb on + strand at 984.394 kb on - strand at 984.394 kb on - strand at 984.394 kb on - strand at 984.412 kb on + strand at 984.413 kb on + strand at 984.413 kb on + strand at 984.420 kb on - strand at 984.421 kb on - strand at 984.477 kb on - strand at 985.701 kb on - strand at 985.701 kb on - strand at 985.729 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.008 vol% remove 983,519 + PGA1_c09590 0.23 -0.1 983,538 + PGA1_c09590 0.24 -0.7 983,539 + PGA1_c09590 0.24 -1.1 983,672 + PGA1_c09590 0.36 +0.5 983,687 + PGA1_c09590 0.37 -1.1 983,695 - PGA1_c09590 0.37 -0.2 983,695 - PGA1_c09590 0.37 -2.4 983,741 - PGA1_c09590 0.41 +1.1 983,743 + PGA1_c09590 0.42 -1.1 983,798 - PGA1_c09590 0.46 -0.1 983,798 - PGA1_c09590 0.46 -2.2 983,809 + PGA1_c09590 0.47 +2.2 983,817 - PGA1_c09590 0.48 +0.5 983,817 - PGA1_c09590 0.48 +0.0 983,876 - PGA1_c09590 0.53 -1.5 983,916 - PGA1_c09590 0.56 +0.6 983,936 - PGA1_c09590 0.58 -0.9 983,982 + PGA1_c09590 0.62 -0.3 984,036 - PGA1_c09590 0.66 -1.9 984,050 + PGA1_c09590 0.68 -0.8 984,073 + PGA1_c09590 0.69 -0.9 984,138 + PGA1_c09590 0.75 -1.2 984,381 + -0.2 984,386 + -0.1 984,394 - +1.6 984,394 - +0.0 984,394 - -1.2 984,412 + +0.9 984,413 + -0.5 984,413 + -0.3 984,420 - +0.4 984,421 - -0.2 984,477 - +1.8 985,701 - -0.4 985,701 - -0.5 985,729 + -1.4 985,739 + +1.3 985,739 + +0.4 985,739 + -0.8 985,739 + -0.8
Or see this region's nucleotide sequence