Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c08240 and PGA1_c08250 overlap by 8 nucleotides PGA1_c08250 and PGA1_c08260 are separated by 93 nucleotides
PGA1_c08240: PGA1_c08240 - aerobic glycerol-3-phosphate dehydrogenase GlpD, at 852,461 to 854,050
_c08240
PGA1_c08250: PGA1_c08250 - putative glycerol-3-phosphate regulon repressor glpR, at 854,043 to 854,828
_c08250
PGA1_c08260: PGA1_c08260 - Uncharacterized protein conserved in bacteria, at 854,922 to 856,016
_c08260
Position (kb) 854
855 Strain fitness (log2 ratio) -2
-1
0
1
2 at 854.222 kb on - strand, within PGA1_c08250 at 854.222 kb on - strand, within PGA1_c08250 at 854.309 kb on - strand, within PGA1_c08250 at 854.514 kb on - strand, within PGA1_c08250 at 854.561 kb on - strand, within PGA1_c08250 at 854.746 kb on - strand, within PGA1_c08250 at 854.845 kb on + strand at 854.971 kb on + strand at 854.975 kb on - strand at 854.975 kb on - strand at 855.255 kb on - strand, within PGA1_c08260 at 855.404 kb on + strand, within PGA1_c08260 at 855.411 kb on - strand, within PGA1_c08260 at 855.411 kb on - strand, within PGA1_c08260 at 855.436 kb on - strand, within PGA1_c08260 at 855.449 kb on - strand, within PGA1_c08260 at 855.512 kb on + strand, within PGA1_c08260 at 855.517 kb on + strand, within PGA1_c08260 at 855.520 kb on - strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.653 kb on + strand, within PGA1_c08260 at 855.661 kb on - strand, within PGA1_c08260 at 855.661 kb on - strand, within PGA1_c08260 at 855.661 kb on - strand, within PGA1_c08260 at 855.661 kb on - strand, within PGA1_c08260 at 855.661 kb on - strand, within PGA1_c08260 at 855.661 kb on - strand, within PGA1_c08260 at 855.708 kb on - strand, within PGA1_c08260 at 855.708 kb on - strand, within PGA1_c08260 at 855.720 kb on + strand, within PGA1_c08260 at 855.728 kb on - strand, within PGA1_c08260 at 855.728 kb on - strand, within PGA1_c08260
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.008 vol% remove 854,222 - PGA1_c08250 0.23 -2.6 854,222 - PGA1_c08250 0.23 +2.1 854,309 - PGA1_c08250 0.34 -1.1 854,514 - PGA1_c08250 0.60 +0.1 854,561 - PGA1_c08250 0.66 +0.1 854,746 - PGA1_c08250 0.89 +0.1 854,845 + +0.1 854,971 + +0.1 854,975 - +2.1 854,975 - +2.1 855,255 - PGA1_c08260 0.30 +1.1 855,404 + PGA1_c08260 0.44 +2.7 855,411 - PGA1_c08260 0.45 +0.5 855,411 - PGA1_c08260 0.45 +0.1 855,436 - PGA1_c08260 0.47 +0.1 855,449 - PGA1_c08260 0.48 +1.5 855,512 + PGA1_c08260 0.54 +1.1 855,517 + PGA1_c08260 0.54 -0.3 855,520 - PGA1_c08260 0.55 -1.3 855,653 + PGA1_c08260 0.67 +0.1 855,653 + PGA1_c08260 0.67 +2.1 855,653 + PGA1_c08260 0.67 +2.1 855,653 + PGA1_c08260 0.67 +1.1 855,653 + PGA1_c08260 0.67 +1.1 855,653 + PGA1_c08260 0.67 +1.1 855,653 + PGA1_c08260 0.67 +2.1 855,653 + PGA1_c08260 0.67 +1.1 855,653 + PGA1_c08260 0.67 -0.5 855,661 - PGA1_c08260 0.67 -0.4 855,661 - PGA1_c08260 0.67 -0.3 855,661 - PGA1_c08260 0.67 +2.7 855,661 - PGA1_c08260 0.67 -1.3 855,661 - PGA1_c08260 0.67 -0.5 855,661 - PGA1_c08260 0.67 +0.3 855,708 - PGA1_c08260 0.72 +1.7 855,708 - PGA1_c08260 0.72 +1.1 855,720 + PGA1_c08260 0.73 +1.1 855,728 - PGA1_c08260 0.74 +0.2 855,728 - PGA1_c08260 0.74 -1.3
Or see this region's nucleotide sequence