Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35200

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
3,690,766	+				+0.8
3,690,771	+				+2.0
3,690,779	+				+0.7
3,690,860	-		PGA1_c35190	0.18	+0.4
3,690,860	-		PGA1_c35190	0.18	-0.3
3,690,880	+		PGA1_c35190	0.22	-0.2
3,690,923	+		PGA1_c35190	0.31	-0.7
3,690,987	+		PGA1_c35190	0.43	-0.5
3,690,987	+		PGA1_c35190	0.43	-0.5
3,690,995	-		PGA1_c35190	0.45	+0.1
3,691,029	-		PGA1_c35190	0.51	-1.2
3,691,036	-		PGA1_c35190	0.53	+1.7
3,691,184	+		PGA1_c35190	0.82	-0.5
3,691,184	+		PGA1_c35190	0.82	-1.2
3,691,184	+		PGA1_c35190	0.82	-1.8
3,691,198	-		PGA1_c35190	0.85	-0.0
3,691,209	+		PGA1_c35190	0.87	-1.9
3,691,292	-				+0.1
3,691,292	-				-0.3
3,691,292	-				+0.5
3,691,300	+				+1.3
3,691,311	-				+0.4
3,691,316	-				-1.7
3,691,320	+				+3.0
3,691,330	+				-0.3
3,691,395	-				-0.3
3,691,416	+				+0.0
3,691,435	-				-1.8
3,691,460	-		PGA1_c35200	0.11	-1.2
3,691,468	-		PGA1_c35200	0.12	-0.7
3,691,472	+		PGA1_c35200	0.12	+1.8
3,691,480	-		PGA1_c35200	0.14	+0.2
3,691,488	-		PGA1_c35200	0.15	-1.6
3,691,600	-		PGA1_c35200	0.32	-1.5
3,691,645	-		PGA1_c35200	0.39	-0.1
3,691,689	+		PGA1_c35200	0.46	-1.8
3,691,749	-		PGA1_c35200	0.55	-2.1
3,691,794	-		PGA1_c35200	0.61	-2.3
3,691,818	-		PGA1_c35200	0.65	-1.6
3,691,858	-		PGA1_c35200	0.71	-4.1
3,691,878	+		PGA1_c35200	0.74	+1.4
3,691,910	-		PGA1_c35200	0.79	-3.1
3,692,129	+				-0.9
3,692,139	+				+2.2
3,692,139	+				-0.6
3,692,154	+		PGA1_c35210	0.11	-0.9
3,692,175	-		PGA1_c35210	0.12	-0.2
3,692,273	+		PGA1_c35210	0.22	-0.3
3,692,273	+		PGA1_c35210	0.22	-1.1
3,692,273	+		PGA1_c35210	0.22	-0.7
3,692,273	+		PGA1_c35210	0.22	+0.3
3,692,273	+		PGA1_c35210	0.22	-0.8
3,692,273	+		PGA1_c35210	0.22	-0.3
3,692,273	+		PGA1_c35210	0.22	-0.9
3,692,273	+		PGA1_c35210	0.22	-0.2
3,692,273	+		PGA1_c35210	0.22	-2.0
3,692,273	+		PGA1_c35210	0.22	+0.2
3,692,273	+		PGA1_c35210	0.22	-2.6
3,692,273	+		PGA1_c35210	0.22	-0.4
3,692,273	+		PGA1_c35210	0.22	-1.0
3,692,273	+		PGA1_c35210	0.22	-0.8
3,692,273	+		PGA1_c35210	0.22	+1.0
3,692,273	+		PGA1_c35210	0.22	+0.6
3,692,273	+		PGA1_c35210	0.22	-1.0
3,692,281	-		PGA1_c35210	0.23	+0.2
3,692,281	-		PGA1_c35210	0.23	+1.8
3,692,281	-		PGA1_c35210	0.23	-0.2
3,692,281	-		PGA1_c35210	0.23	-2.6
3,692,281	-		PGA1_c35210	0.23	+0.0
3,692,281	-		PGA1_c35210	0.23	-2.4
3,692,281	-		PGA1_c35210	0.23	+1.4
3,692,281	-		PGA1_c35210	0.23	-0.0
3,692,281	-		PGA1_c35210	0.23	-0.5
3,692,281	-		PGA1_c35210	0.23	-1.6
3,692,281	-		PGA1_c35210	0.23	+2.1
3,692,281	-		PGA1_c35210	0.23	+1.1
3,692,335	+		PGA1_c35210	0.28	-1.6
3,692,343	-		PGA1_c35210	0.28	+0.4
3,692,380	-		PGA1_c35210	0.32	-1.3
3,692,390	-		PGA1_c35210	0.33	-0.4
3,692,409	-		PGA1_c35210	0.35	-0.1
3,692,469	+		PGA1_c35210	0.40	-0.0
3,692,482	+		PGA1_c35210	0.42	-0.5
3,692,482	+		PGA1_c35210	0.42	-1.4
3,692,601	+		PGA1_c35210	0.53	-0.5
3,692,601	+		PGA1_c35210	0.53	+0.4
3,692,609	-		PGA1_c35210	0.54	-0.2
3,692,609	-		PGA1_c35210	0.54	-2.3
3,692,636	+		PGA1_c35210	0.56	-0.9
3,692,641	+		PGA1_c35210	0.57	-2.6
3,692,681	+		PGA1_c35210	0.60	-2.2
3,692,681	+		PGA1_c35210	0.60	-0.1
3,692,681	+		PGA1_c35210	0.60	-1.8
3,692,686	+		PGA1_c35210	0.61	-1.2
3,692,689	-		PGA1_c35210	0.61	+0.5
3,692,689	-		PGA1_c35210	0.61	-0.8
3,692,689	-		PGA1_c35210	0.61	+0.1
3,692,689	-		PGA1_c35210	0.61	-1.0
3,692,689	-		PGA1_c35210	0.61	+2.2
3,692,694	-		PGA1_c35210	0.62	-2.1
3,692,694	-		PGA1_c35210	0.62	-1.6
3,692,694	-		PGA1_c35210	0.62	-1.1
3,692,694	-		PGA1_c35210	0.62	-0.7
3,692,694	-		PGA1_c35210	0.62	-1.1
3,692,699	-		PGA1_c35210	0.62	-0.8
3,692,704	-		PGA1_c35210	0.63	-1.0
3,692,704	-		PGA1_c35210	0.63	-1.5
3,692,893	-		PGA1_c35210	0.80	-1.8