Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33830

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
3,547,125	+		PGA1_c33820	0.61	+0.1
3,547,125	-		PGA1_c33820	0.61	+0.2
3,547,137	+		PGA1_c33820	0.62	+0.2
3,547,154	+		PGA1_c33820	0.63	+0.5
3,547,161	-		PGA1_c33820	0.63	+0.4
3,547,161	-		PGA1_c33820	0.63	+0.6
3,547,166	-		PGA1_c33820	0.64	+0.8
3,547,206	+		PGA1_c33820	0.66	-1.1
3,547,206	+		PGA1_c33820	0.66	+1.4
3,547,206	+		PGA1_c33820	0.66	-0.3
3,547,206	+		PGA1_c33820	0.66	+0.9
3,547,206	+		PGA1_c33820	0.66	+0.1
3,547,206	+		PGA1_c33820	0.66	+0.9
3,547,206	+		PGA1_c33820	0.66	-1.3
3,547,211	+		PGA1_c33820	0.66	-0.2
3,547,211	+		PGA1_c33820	0.66	+0.0
3,547,211	+		PGA1_c33820	0.66	-1.5
3,547,214	-		PGA1_c33820	0.66	-1.3
3,547,214	-		PGA1_c33820	0.66	-0.7
3,547,214	-		PGA1_c33820	0.66	+1.4
3,547,214	-		PGA1_c33820	0.66	-0.5
3,547,215	-		PGA1_c33820	0.67	-0.6
3,547,225	+		PGA1_c33820	0.67	+0.3
3,547,282	+		PGA1_c33820	0.71	+0.4
3,547,324	+		PGA1_c33820	0.73	-0.2
3,547,368	-		PGA1_c33820	0.76	+0.5
3,547,368	-		PGA1_c33820	0.76	+0.9
3,547,401	+		PGA1_c33820	0.78	+1.3
3,547,500	+		PGA1_c33820	0.84	-0.1
3,547,523	+		PGA1_c33820	0.85	-0.9
3,547,531	-		PGA1_c33820	0.86	-0.5
3,547,541	-		PGA1_c33820	0.86	-0.6
3,547,565	+		PGA1_c33820	0.88	+0.1
3,547,565	+		PGA1_c33820	0.88	-2.6
3,547,579	-		PGA1_c33820	0.89	+0.6
3,547,661	-				-0.7
3,547,682	-				-1.0
3,547,744	+				-1.7
3,547,747	-				-0.2
3,547,794	+				-0.1
3,547,811	-				+0.2
3,547,816	-				-0.6
3,547,855	+				+0.5
3,547,855	+				+1.8
3,547,862	+				+1.2
3,547,928	+				+0.8
3,547,946	-				-1.1
3,547,951	+				-1.6
3,547,952	+				-0.3
3,547,952	+				-0.4
3,548,056	+				+2.1
3,548,070	+				-1.0
3,548,159	+				-0.6
3,548,159	+				-0.1
3,548,159	+				-2.6
3,548,159	+				+0.8
3,548,205	-				-2.8
3,548,210	-		PGA1_c33830	0.10	+1.1
3,548,217	-		PGA1_c33830	0.11	+1.0
3,548,217	-		PGA1_c33830	0.11	-0.3
3,548,217	-		PGA1_c33830	0.11	+0.4
3,548,301	+		PGA1_c33830	0.20	+0.4
3,548,337	+		PGA1_c33830	0.24	+0.7
3,548,345	-		PGA1_c33830	0.25	+0.8
3,548,360	+		PGA1_c33830	0.27	+0.7
3,548,400	-		PGA1_c33830	0.31	+0.5
3,548,449	-		PGA1_c33830	0.36	+0.9
3,548,477	+		PGA1_c33830	0.39	-0.1
3,548,478	+		PGA1_c33830	0.40	+0.2
3,548,516	+		PGA1_c33830	0.44	+2.4
3,548,525	+		PGA1_c33830	0.45	+0.9
3,548,525	+		PGA1_c33830	0.45	-1.3
3,548,533	-		PGA1_c33830	0.46	-0.6
3,548,583	-		PGA1_c33830	0.51	+0.6
3,548,590	+		PGA1_c33830	0.52	-0.1
3,548,595	+		PGA1_c33830	0.52	-3.0
3,548,596	+		PGA1_c33830	0.53	+0.5
3,548,629	-		PGA1_c33830	0.56	+1.7
3,548,701	+		PGA1_c33830	0.64	+1.0
3,548,748	-		PGA1_c33830	0.69	+0.9
3,548,748	-		PGA1_c33830	0.69	-0.3
3,548,775	+		PGA1_c33830	0.72	-1.0
3,548,776	+		PGA1_c33830	0.72	+2.8
3,548,783	-		PGA1_c33830	0.73	+0.0
3,548,829	+		PGA1_c33830	0.78	-0.6
3,548,829	+		PGA1_c33830	0.78	-0.6
3,548,837	-		PGA1_c33830	0.79	+0.9
3,548,837	-		PGA1_c33830	0.79	-1.6
3,548,837	-		PGA1_c33830	0.79	-1.1
3,548,837	-		PGA1_c33830	0.79	-1.0
3,548,837	-		PGA1_c33830	0.79	-2.0
3,548,839	-		PGA1_c33830	0.79	-0.6
3,548,852	-		PGA1_c33830	0.81	+0.7
3,548,881	+		PGA1_c33830	0.84	+0.1
3,548,927	+		PGA1_c33830	0.89	-2.9
3,548,956	-				-0.4
3,548,994	-				-0.5
3,548,996	+				-1.7
3,549,157	-		PGA1_c33840	0.15	-0.5
3,549,203	+		PGA1_c33840	0.20	-1.3
3,549,203	+		PGA1_c33840	0.20	+0.7
3,549,203	+		PGA1_c33840	0.20	+0.4
3,549,206	-		PGA1_c33840	0.20	+1.7
3,549,211	-		PGA1_c33840	0.21	-1.0
3,549,277	+		PGA1_c33840	0.28	+1.9
3,549,277	+		PGA1_c33840	0.28	+0.4
3,549,285	-		PGA1_c33840	0.29	+1.7
3,549,290	-		PGA1_c33840	0.29	+0.2
3,549,338	+		PGA1_c33840	0.35	+2.4
3,549,338	+		PGA1_c33840	0.35	-1.3
3,549,410	-		PGA1_c33840	0.42	-1.2
3,549,428	+		PGA1_c33840	0.44	+0.1
3,549,428	+		PGA1_c33840	0.44	-0.6
3,549,436	-		PGA1_c33840	0.45	+0.6
3,549,527	+		PGA1_c33840	0.55	-1.7
3,549,537	+		PGA1_c33840	0.57	+1.0
3,549,537	+		PGA1_c33840	0.57	+0.5
3,549,546	-		PGA1_c33840	0.58	-0.3
3,549,555	+		PGA1_c33840	0.58	+0.1
3,549,560	+		PGA1_c33840	0.59	-0.8
3,549,568	-		PGA1_c33840	0.60	-0.6
3,549,787	+		PGA1_c33840	0.84	-0.0
3,549,795	-		PGA1_c33840	0.85	+0.2
3,549,825	+		PGA1_c33840	0.88	+0.8
3,549,838	-		PGA1_c33840	0.90	-0.9
3,549,840	+				-0.6
3,549,886	+				-0.1
3,549,894	-				-0.6
3,549,902	+				+0.8
3,549,916	+				-0.2
3,549,924	+				+0.5
3,549,939	+				-0.2
3,549,947	-				+0.3
3,549,949	+				+0.3
3,549,952	-				-2.6
3,549,957	-				-0.5
3,549,957	-				+0.0
3,550,007	+				-1.0
3,550,007	+				+0.6
3,550,007	+				-3.2