Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33490
Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. methylglyoxal 0.008 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 3,509,316 | + | PGA1_c33480 | 0.54 | +0.4 | |
| 3,509,910 | + | -0.2 | |||
| 3,509,989 | + | +1.1 | |||
| 3,510,627 | + | PGA1_c33490 | 0.87 | -3.2 | |
| 3,510,630 | - | PGA1_c33490 | 0.87 | -0.2 | |
| 3,510,708 | + | -1.0 | |||
| 3,510,729 | + | +0.8 | |||
| 3,510,747 | + | +0.3 | |||
| 3,510,763 | + | +0.1 | |||
| 3,511,431 | - | PGA1_c33500 | 0.56 | -2.1 | |
| 3,511,518 | - | PGA1_c33500 | 0.63 | -1.0 | |
| 3,511,518 | - | PGA1_c33500 | 0.63 | -0.6 | |
| 3,511,520 | + | PGA1_c33500 | 0.63 | +1.6 | |
| 3,511,535 | + | PGA1_c33500 | 0.65 | -1.2 | |
| 3,511,545 | + | PGA1_c33500 | 0.65 | +1.3 | |
| 3,511,574 | + | PGA1_c33500 | 0.68 | -0.5 | |
| 3,511,584 | + | PGA1_c33500 | 0.69 | -1.1 | |
| 3,511,584 | + | PGA1_c33500 | 0.69 | -0.2 | |
| 3,511,602 | - | PGA1_c33500 | 0.70 | +2.1 | |
| 3,511,665 | + | PGA1_c33500 | 0.76 | -1.0 | |
| 3,511,695 | + | PGA1_c33500 | 0.78 | +0.1 | |
| 3,511,703 | + | PGA1_c33500 | 0.79 | +0.2 | |
| 3,511,703 | + | PGA1_c33500 | 0.79 | -1.0 | |
| 3,511,713 | + | PGA1_c33500 | 0.80 | -1.4 |
Or see this region's nucleotide sequence