Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32750
Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. methylglyoxal 0.008 vol% |
---|---|---|---|---|---|
remove | |||||
3,433,004 | - | PGA1_c32740 | 0.61 | -1.0 | |
3,433,014 | + | PGA1_c32740 | 0.61 | -0.9 | |
3,433,014 | + | PGA1_c32740 | 0.61 | -0.3 | |
3,433,117 | + | PGA1_c32740 | 0.67 | +0.0 | |
3,433,147 | + | PGA1_c32740 | 0.68 | -2.3 | |
3,433,149 | + | PGA1_c32740 | 0.68 | -1.7 | |
3,433,176 | + | PGA1_c32740 | 0.70 | -1.0 | |
3,433,176 | + | PGA1_c32740 | 0.70 | -0.7 | |
3,433,211 | + | PGA1_c32740 | 0.71 | -0.3 | |
3,433,246 | - | PGA1_c32740 | 0.73 | -1.0 | |
3,433,255 | - | PGA1_c32740 | 0.74 | +0.8 | |
3,433,291 | - | PGA1_c32740 | 0.75 | -0.8 | |
3,433,311 | - | PGA1_c32740 | 0.76 | -1.4 | |
3,433,351 | - | PGA1_c32740 | 0.78 | -1.8 | |
3,433,377 | - | PGA1_c32740 | 0.80 | -2.3 | |
3,433,416 | - | PGA1_c32740 | 0.82 | -2.3 | |
3,433,425 | + | PGA1_c32740 | 0.82 | -1.3 | |
3,433,425 | + | PGA1_c32740 | 0.82 | -0.5 | |
3,433,435 | + | PGA1_c32740 | 0.83 | +0.1 | |
3,433,440 | + | PGA1_c32740 | 0.83 | -0.5 | |
3,433,440 | + | PGA1_c32740 | 0.83 | -2.6 | |
3,433,455 | + | PGA1_c32740 | 0.84 | +1.6 | |
3,433,569 | + | PGA1_c32740 | 0.90 | -0.9 | |
3,433,583 | - | -0.7 |
Or see this region's nucleotide sequence