Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32110

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
3,365,959	-		PGA1_c32100	0.39	+0.7
3,365,959	-		PGA1_c32100	0.39	-2.5
3,365,995	-		PGA1_c32100	0.41	-0.5
3,366,029	+		PGA1_c32100	0.43	-1.8
3,366,034	+		PGA1_c32100	0.43	-0.2
3,366,039	+		PGA1_c32100	0.44	+0.8
3,366,060	+		PGA1_c32100	0.45	-1.8
3,366,093	+		PGA1_c32100	0.47	+0.9
3,366,101	-		PGA1_c32100	0.48	-2.8
3,366,102	-		PGA1_c32100	0.48	-1.3
3,366,143	-		PGA1_c32100	0.50	-1.8
3,366,152	-		PGA1_c32100	0.51	+0.9
3,366,154	-		PGA1_c32100	0.51	+0.6
3,366,211	+		PGA1_c32100	0.54	+0.8
3,366,211	+		PGA1_c32100	0.54	-0.2
3,366,211	+		PGA1_c32100	0.54	+0.0
3,366,249	+		PGA1_c32100	0.57	-2.9
3,366,397	-		PGA1_c32100	0.66	+1.8
3,366,438	-		PGA1_c32100	0.69	-2.8
3,366,440	+		PGA1_c32100	0.69	-2.3
3,366,491	-		PGA1_c32100	0.72	-0.9
3,366,551	+		PGA1_c32100	0.76	-1.3
3,366,647	+		PGA1_c32100	0.82	-1.1
3,366,652	+		PGA1_c32100	0.82	-1.0
3,366,652	+		PGA1_c32100	0.82	+1.0
3,366,660	-		PGA1_c32100	0.82	+0.6
3,366,683	+		PGA1_c32100	0.84	+0.1
3,366,695	-		PGA1_c32100	0.85	-0.1
3,366,710	+		PGA1_c32100	0.86	-0.8
3,366,740	-		PGA1_c32100	0.87	+0.8
3,366,740	-		PGA1_c32100	0.87	+0.2
3,366,752	+		PGA1_c32100	0.88	+0.9
3,366,767	+		PGA1_c32100	0.89	-2.8
3,366,767	+		PGA1_c32100	0.89	-0.2
3,366,767	+		PGA1_c32100	0.89	-1.8
3,366,774	+		PGA1_c32100	0.89	-0.4
3,366,775	-		PGA1_c32100	0.90	-0.1
3,366,789	+				-0.3
3,366,797	-				-2.2
3,366,823	+				+0.1
3,366,848	+				-0.2
3,366,855	+				-0.8
3,366,892	-				+0.2
3,366,954	+				-0.1
3,366,962	-				+0.4
3,367,012	-		PGA1_c32110	0.15	+1.0
3,367,028	-		PGA1_c32110	0.19	+2.2
3,367,029	-		PGA1_c32110	0.19	-0.1
3,367,056	+		PGA1_c32110	0.25	+1.7
3,367,062	+		PGA1_c32110	0.26	+1.3
3,367,119	+		PGA1_c32110	0.38	+1.0
3,367,132	+		PGA1_c32110	0.41	+1.4
3,367,189	+		PGA1_c32110	0.53	+0.6
3,367,221	+		PGA1_c32110	0.59	-0.2
3,367,375	-				-0.8
3,367,407	+				+0.7
3,367,436	-				+0.4
3,367,585	+		PGA1_c32120	0.12	-1.6
3,367,585	+		PGA1_c32120	0.12	-0.6
3,367,598	-		PGA1_c32120	0.13	+1.7
3,367,603	+		PGA1_c32120	0.14	-3.1
3,367,628	+		PGA1_c32120	0.15	-0.6
3,367,666	+		PGA1_c32120	0.18	-1.8
3,367,676	+		PGA1_c32120	0.19	-0.4
3,367,684	-		PGA1_c32120	0.19	+1.1
3,367,694	-		PGA1_c32120	0.20	-0.3
3,367,722	+		PGA1_c32120	0.22	-0.5
3,367,736	+		PGA1_c32120	0.23	-0.8
3,367,826	+		PGA1_c32120	0.29	+0.1
3,367,859	+		PGA1_c32120	0.31	+0.1
3,367,878	-		PGA1_c32120	0.32	+1.0
3,367,923	-		PGA1_c32120	0.36	-0.7
3,368,000	+		PGA1_c32120	0.41	+0.9
3,368,117	-		PGA1_c32120	0.49	+0.2
3,368,165	+		PGA1_c32120	0.52	-1.2
3,368,165	+		PGA1_c32120	0.52	+1.1
3,368,165	+		PGA1_c32120	0.52	+0.2
3,368,173	-		PGA1_c32120	0.53	-0.1
3,368,173	-		PGA1_c32120	0.53	-0.5
3,368,173	-		PGA1_c32120	0.53	-2.3
3,368,173	-		PGA1_c32120	0.53	+1.1
3,368,173	-		PGA1_c32120	0.53	+2.0
3,368,183	-		PGA1_c32120	0.53	+0.6
3,368,205	-		PGA1_c32120	0.55	-1.5
3,368,263	+		PGA1_c32120	0.59	-1.1
3,368,263	+		PGA1_c32120	0.59	-0.8
3,368,263	+		PGA1_c32120	0.59	+0.3
3,368,263	+		PGA1_c32120	0.59	+0.2
3,368,263	+		PGA1_c32120	0.59	+0.2
3,368,271	-		PGA1_c32120	0.59	+0.9
3,368,271	-		PGA1_c32120	0.59	-0.9
3,368,271	-		PGA1_c32120	0.59	+1.5
3,368,271	-		PGA1_c32120	0.59	+0.5
3,368,271	-		PGA1_c32120	0.59	-0.8
3,368,322	-		PGA1_c32120	0.63	+0.3
3,368,363	+		PGA1_c32120	0.66	+0.7
3,368,372	+		PGA1_c32120	0.66	+2.0
3,368,380	-		PGA1_c32120	0.67	-0.7