Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31780

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
3,320,291	+		PGA1_c31770	0.64	+0.8
3,320,299	-		PGA1_c31770	0.64	-0.4
3,320,312	+		PGA1_c31770	0.65	+1.5
3,320,420	-		PGA1_c31770	0.70	+0.9
3,320,436	+		PGA1_c31770	0.71	+0.1
3,320,451	-		PGA1_c31770	0.71	+0.1
3,320,451	-		PGA1_c31770	0.71	+0.7
3,320,451	-		PGA1_c31770	0.71	+2.2
3,320,456	-		PGA1_c31770	0.72	-0.1
3,320,456	-		PGA1_c31770	0.72	+1.8
3,320,481	-		PGA1_c31770	0.73	+0.7
3,320,498	+		PGA1_c31770	0.74	-1.2
3,320,499	-		PGA1_c31770	0.74	-0.5
3,320,558	-		PGA1_c31770	0.77	-0.4
3,320,567	-		PGA1_c31770	0.77	-1.6
3,320,650	-		PGA1_c31770	0.81	-1.4
3,320,690	+		PGA1_c31770	0.83	-0.1
3,320,690	+		PGA1_c31770	0.83	-2.6
3,320,690	+		PGA1_c31770	0.83	+0.4
3,320,690	+		PGA1_c31770	0.83	-1.1
3,320,690	+		PGA1_c31770	0.83	+0.7
3,320,690	+		PGA1_c31770	0.83	-0.6
3,320,690	+		PGA1_c31770	0.83	-0.2
3,320,690	+		PGA1_c31770	0.83	-0.1
3,320,690	+		PGA1_c31770	0.83	+0.3
3,320,690	+		PGA1_c31770	0.83	-0.0
3,320,690	+		PGA1_c31770	0.83	+0.2
3,320,690	+		PGA1_c31770	0.83	-0.6
3,320,690	+		PGA1_c31770	0.83	+0.4
3,320,690	+		PGA1_c31770	0.83	+1.2
3,320,698	-		PGA1_c31770	0.83	-1.4
3,320,698	-		PGA1_c31770	0.83	-1.0
3,320,698	-		PGA1_c31770	0.83	-0.8
3,320,698	-		PGA1_c31770	0.83	+1.6
3,320,698	-		PGA1_c31770	0.83	+0.0
3,320,703	+		PGA1_c31770	0.84	+0.1
3,320,703	+		PGA1_c31770	0.84	+1.8
3,320,706	-		PGA1_c31770	0.84	-1.1
3,320,734	-		PGA1_c31770	0.85	+1.2
3,320,756	+		PGA1_c31770	0.86	-1.4
3,320,756	+		PGA1_c31770	0.86	-0.2
3,320,780	+		PGA1_c31770	0.87	+0.6
3,320,780	+		PGA1_c31770	0.87	+0.4
3,320,788	-		PGA1_c31770	0.88	+1.2
3,320,790	+		PGA1_c31770	0.88	+1.5
3,320,793	-		PGA1_c31770	0.88	-0.2
3,320,793	-		PGA1_c31770	0.88	-0.6
3,320,824	-		PGA1_c31770	0.90	-1.4
3,320,826	-		PGA1_c31770	0.90	-0.7
3,320,834	-				+1.4
3,320,861	-				+0.1
3,320,868	+				+0.6
3,320,896	-				-0.6
3,320,896	-				-2.0
3,320,913	+				+1.7
3,320,941	+				+1.4
3,320,948	+				+2.1
3,320,949	-				+0.8
3,320,949	-				+1.1
3,320,949	-				-1.1
3,320,973	+				+0.4
3,320,973	+				+0.7
3,320,973	+				-0.3
3,321,040	+				+0.5
3,321,040	+				-1.0
3,321,040	+				+0.8
3,321,045	+				+1.6
3,321,091	-				+0.4
3,321,095	+				-1.5
3,321,095	+				-0.7
3,321,101	+				+0.2
3,321,103	-				-0.4
3,321,103	-				-1.6
3,321,109	-				-0.5
3,321,109	-				-0.0
3,321,109	-				-1.7
3,321,121	+				+0.0
3,321,121	+				-0.1
3,321,121	+				-0.5
3,321,124	-				-1.5
3,321,136	-				-1.0
3,321,149	+				-2.2
3,321,162	-				+1.5
3,322,145	+		PGA1_c31780	0.31	-3.2
3,322,145	+		PGA1_c31780	0.31	-0.5
3,322,153	-		PGA1_c31780	0.31	-2.1
3,322,882	-		PGA1_c31780	0.57	-2.2
3,323,160	+		PGA1_c31780	0.67	+0.0
3,323,175	+		PGA1_c31780	0.67	-1.4
3,323,328	-		PGA1_c31780	0.73	-0.1
3,323,631	-		PGA1_c31780	0.84	+0.1
3,323,948	+				-0.7
3,323,965	-				-1.8
3,324,071	+				+1.2
3,324,074	-				-1.7
3,324,074	-				-1.4
3,324,074	-				+0.2
3,324,074	-				-1.2
3,324,117	-				+0.5
3,324,129	+				+1.0
3,324,139	+				+1.4
3,324,283	+				+1.6
3,324,283	+				-2.0
3,324,284	+				+1.2
3,324,291	-				+0.3
3,324,304	+				+1.2
3,324,304	+				-0.4
3,324,314	+				-2.1
3,324,314	+				+0.8
3,324,398	+		PGA1_c31790	0.38	-0.7
3,324,400	+		PGA1_c31790	0.39	+1.4
3,324,434	-		PGA1_c31790	0.52	+1.2
3,324,457	+		PGA1_c31790	0.61	-1.2
3,324,500	-		PGA1_c31790	0.78	-0.0
3,324,508	-		PGA1_c31790	0.81	-0.4
3,324,524	+		PGA1_c31790	0.87	-1.8
3,324,532	-				+1.1
3,324,532	-				-0.8
3,324,537	-				+1.2
3,324,537	-				+0.2
3,324,585	+				-2.0
3,324,593	-				+1.6
3,324,593	-				-0.5
3,324,640	+				+1.8
3,324,671	-				-0.6
3,324,671	-				+1.6
3,324,703	+				-0.2
3,324,713	+				+0.3
3,324,718	+				+3.5
3,324,727	+				-0.1
3,324,754	+				-1.4
3,324,762	-				+1.4
3,324,762	-				-0.1
3,324,766	+				+1.7
3,324,847	+		PGA1_c31800	0.19	+0.4
3,324,847	+		PGA1_c31800	0.19	+1.2
3,324,855	-		PGA1_c31800	0.20	+1.2
3,324,862	+		PGA1_c31800	0.21	-0.4
3,324,865	-		PGA1_c31800	0.21	-1.4
3,324,930	-		PGA1_c31800	0.30	-1.0
3,324,930	-		PGA1_c31800	0.30	-1.6
3,324,977	+		PGA1_c31800	0.36	-1.1
3,324,977	+		PGA1_c31800	0.36	-2.2
3,324,985	-		PGA1_c31800	0.37	-1.0
3,324,985	-		PGA1_c31800	0.37	+0.1
3,324,985	-		PGA1_c31800	0.37	-1.6
3,325,034	+		PGA1_c31800	0.44	-2.4
3,325,034	+		PGA1_c31800	0.44	-0.6
3,325,037	-		PGA1_c31800	0.44	+0.2
3,325,039	+		PGA1_c31800	0.44	+0.0