Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29920

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
3,128,590	+		PGA1_c29910	0.66	-1.5
3,128,595	+		PGA1_c29910	0.67	+0.1
3,128,603	-		PGA1_c29910	0.67	+0.6
3,128,603	-		PGA1_c29910	0.67	+0.2
3,128,603	-		PGA1_c29910	0.67	+1.0
3,128,715	+		PGA1_c29910	0.72	-1.0
3,128,736	+		PGA1_c29910	0.73	-0.5
3,128,754	+		PGA1_c29910	0.74	+0.6
3,128,766	+		PGA1_c29910	0.75	+0.3
3,128,829	+		PGA1_c29910	0.77	+1.3
3,128,838	-		PGA1_c29910	0.78	-0.1
3,128,863	-		PGA1_c29910	0.79	+1.2
3,128,897	-		PGA1_c29910	0.81	-0.5
3,128,924	+		PGA1_c29910	0.82	-0.0
3,128,924	+		PGA1_c29910	0.82	+1.4
3,128,931	-		PGA1_c29910	0.82	-0.4
3,128,932	-		PGA1_c29910	0.82	-2.0
3,128,932	-		PGA1_c29910	0.82	+0.0
3,128,932	-		PGA1_c29910	0.82	-1.3
3,128,932	-		PGA1_c29910	0.82	+1.0
3,128,950	+		PGA1_c29910	0.83	+0.5
3,128,950	+		PGA1_c29910	0.83	+0.1
3,128,950	+		PGA1_c29910	0.83	-2.1
3,128,963	-		PGA1_c29910	0.84	-2.9
3,128,963	-		PGA1_c29910	0.84	+0.3
3,129,004	+		PGA1_c29910	0.85	-0.9
3,129,069	-		PGA1_c29910	0.88	-0.1
3,129,092	+		PGA1_c29910	0.90	+0.3
3,129,248	+				-2.1
3,129,273	-				-3.0
3,129,278	-				-0.4
3,129,304	+				+0.6
3,129,304	+				+0.8
3,129,304	+				+0.9
3,129,304	+				-3.1
3,129,304	+				-0.6
3,129,304	+				+1.4
3,129,310	+				-0.4
3,129,342	+				-0.3
3,129,342	+				-0.3
3,129,342	+				-0.4
3,129,342	+				-0.8
3,129,342	+				-3.5
3,129,342	+				+0.7
3,129,342	+				+0.1
3,129,350	-				+0.8
3,129,421	+				-0.6
3,129,427	-				+1.0
3,129,429	-				-3.0
3,129,431	+				-0.7
3,129,431	+				-0.5
3,129,431	+				-0.3
3,129,431	+				-1.1
3,129,431	+				-1.2
3,129,431	+				+0.9
3,129,431	+				+0.2
3,129,431	+				-0.7
3,129,431	+				-0.1
3,129,431	+				-2.9
3,129,431	+				+1.4
3,129,431	+				-1.1
3,129,431	+				-0.7
3,129,431	+				+0.4
3,129,434	-				-0.4
3,129,439	-				+0.3
3,129,439	-				+0.2
3,129,439	-				-0.7
3,129,439	-				-0.8
3,129,439	-				-0.8
3,129,439	-				-0.1
3,129,439	-				+0.5
3,129,439	-				-0.1
3,129,439	-				-2.4
3,129,439	-				-2.0
3,129,439	-				-2.9
3,129,439	-				-1.2
3,129,439	-				+0.2
3,129,439	-				-0.5
3,129,439	-				+1.7
3,129,439	-				-0.5
3,129,439	-				-0.4
3,129,439	-				-0.4
3,129,467	+				-0.8
3,129,501	-				-1.1
3,129,512	+				+0.4
3,129,531	+				-0.2
3,129,554	-				-0.6
3,129,569	+				-0.2
3,129,571	+				-2.2
3,129,577	-				+0.1
3,129,578	+				-1.3
3,129,578	+				-0.3
3,129,579	-				+0.3
3,129,579	-				+1.6
3,129,637	+				+1.1
3,129,646	+		PGA1_c29920	0.10	-1.8
3,129,651	+		PGA1_c29920	0.10	-0.2
3,129,651	+		PGA1_c29920	0.10	-0.4
3,129,654	-		PGA1_c29920	0.11	-0.0
3,129,659	-		PGA1_c29920	0.11	+0.9
3,129,664	-		PGA1_c29920	0.12	-0.9
3,129,718	+		PGA1_c29920	0.17	-1.4
3,129,723	+		PGA1_c29920	0.17	-0.5
3,129,811	-		PGA1_c29920	0.25	+0.9
3,129,816	+		PGA1_c29920	0.25	+0.3
3,129,819	-		PGA1_c29920	0.26	-2.4
3,129,834	+		PGA1_c29920	0.27	-1.9
3,129,843	-		PGA1_c29920	0.28	-1.6
3,129,853	-		PGA1_c29920	0.29	+0.4
3,129,878	-		PGA1_c29920	0.31	-1.5
3,129,883	-		PGA1_c29920	0.32	+0.3
3,129,888	-		PGA1_c29920	0.32	+0.9
3,129,916	+		PGA1_c29920	0.35	-0.4
3,129,916	+		PGA1_c29920	0.35	-1.6
3,129,989	+		PGA1_c29920	0.41	-0.4
3,130,014	+		PGA1_c29920	0.43	+0.7
3,130,046	+		PGA1_c29920	0.46	+0.9
3,130,046	+		PGA1_c29920	0.46	+0.2
3,130,114	-		PGA1_c29920	0.52	+1.2
3,130,115	+		PGA1_c29920	0.53	+0.6
3,130,116	+		PGA1_c29920	0.53	-0.5
3,130,127	+		PGA1_c29920	0.54	+0.1
3,130,138	+		PGA1_c29920	0.55	-3.1
3,130,146	-		PGA1_c29920	0.55	-1.0
3,130,146	-		PGA1_c29920	0.55	-0.4
3,130,154	-		PGA1_c29920	0.56	+2.7
3,130,164	-		PGA1_c29920	0.57	+0.6
3,130,182	+		PGA1_c29920	0.59	+1.7
3,130,182	+		PGA1_c29920	0.59	+0.2
3,130,190	-		PGA1_c29920	0.59	-0.7
3,130,205	+		PGA1_c29920	0.61	+0.1
3,130,208	-		PGA1_c29920	0.61	-0.3
3,130,213	-		PGA1_c29920	0.61	+0.5
3,130,227	+		PGA1_c29920	0.63	+0.0
3,130,238	+		PGA1_c29920	0.64	+0.9
3,130,246	-		PGA1_c29920	0.64	+0.1
3,130,265	-		PGA1_c29920	0.66	+0.1
3,130,293	+		PGA1_c29920	0.69	+1.9
3,130,303	+		PGA1_c29920	0.70	+2.0
3,130,414	+		PGA1_c29920	0.80	-0.5
3,130,448	-		PGA1_c29920	0.83	+0.1
3,130,499	-		PGA1_c29920	0.87	-2.1
3,130,516	+		PGA1_c29920	0.89	+0.6
3,130,547	+				-0.9
3,130,555	-				-3.1
3,130,555	-				-0.8
3,130,603	+				-0.7
3,130,614	+				+1.2
3,130,618	+				-0.1
3,130,633	-				+0.5
3,130,669	+		PGA1_c29930	0.18	-0.0
3,130,669	+		PGA1_c29930	0.18	-0.1
3,130,677	-		PGA1_c29930	0.23	-2.0
3,130,677	-		PGA1_c29930	0.23	-0.4
3,130,677	-		PGA1_c29930	0.23	+0.7
3,130,682	-		PGA1_c29930	0.26	+0.1
3,130,745	+		PGA1_c29930	0.64	+0.3
3,130,745	+		PGA1_c29930	0.64	+1.1
3,130,745	+		PGA1_c29930	0.64	-1.4
3,130,753	-		PGA1_c29930	0.68	-0.3
3,130,767	-		PGA1_c29930	0.77	-1.0
3,130,807	+				-1.1
3,130,856	-				-2.3