Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27100

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,824,009	-				-0.9
2,824,009	-				+1.4
2,824,011	-				-0.5
2,824,056	-				-0.9
2,824,102	-				+1.7
2,824,102	-				-1.3
2,824,117	+				+0.8
2,824,153	+		PGA1_c27080	0.12	-1.5
2,824,160	+		PGA1_c27080	0.13	-1.4
2,824,168	-		PGA1_c27080	0.14	+2.1
2,824,168	-		PGA1_c27080	0.14	+1.1
2,824,183	-		PGA1_c27080	0.16	-0.3
2,824,191	+		PGA1_c27080	0.17	-0.7
2,824,340	+		PGA1_c27080	0.35	-0.2
2,824,340	+		PGA1_c27080	0.35	+0.5
2,824,355	+		PGA1_c27080	0.37	+0.6
2,824,357	+		PGA1_c27080	0.37	+1.8
2,824,371	+		PGA1_c27080	0.39	+0.7
2,824,371	-		PGA1_c27080	0.39	-0.5
2,824,397	+		PGA1_c27080	0.42	-1.4
2,824,405	-		PGA1_c27080	0.43	+0.1
2,824,407	-		PGA1_c27080	0.43	-0.3
2,824,430	-		PGA1_c27080	0.46	-1.3
2,824,447	-		PGA1_c27080	0.48	+0.3
2,824,449	+		PGA1_c27080	0.48	-0.5
2,824,457	-		PGA1_c27080	0.49	+1.2
2,824,516	+		PGA1_c27080	0.57	+3.1
2,824,524	-		PGA1_c27080	0.58	+0.5
2,824,552	+		PGA1_c27080	0.61	+2.0
2,824,560	-		PGA1_c27080	0.62	+2.2
2,824,573	+		PGA1_c27080	0.64	-0.7
2,824,683	+		PGA1_c27080	0.77	-0.5
2,824,691	-		PGA1_c27080	0.78	+1.3
2,824,691	-		PGA1_c27080	0.78	+0.7
2,824,710	-		PGA1_c27080	0.80	+0.1
2,824,712	+		PGA1_c27080	0.81	-0.7
2,824,741	-		PGA1_c27080	0.84	-1.3
2,824,764	+		PGA1_c27080	0.87	-1.2
2,824,791	+				-0.2
2,824,791	+				+0.1
2,824,791	+				+0.4
2,824,799	-				+1.5
2,824,799	-				+0.8
2,824,799	-				+1.4
2,824,799	-				+0.2
2,824,812	-				-1.3
2,824,822	-				+2.2
2,824,827	-				-2.3
2,824,827	-				+1.5
2,824,950	-				+1.6
2,824,950	-				-0.5
2,825,003	+				-0.9
2,825,003	+				-0.1
2,825,011	-				+0.1
2,825,011	-				-0.5
2,825,011	-				+0.7
2,825,012	+				+2.7
2,825,069	+		PGA1_c27100	0.13	+1.0
2,825,069	+		PGA1_c27100	0.13	+0.2
2,825,074	+		PGA1_c27100	0.14	+1.3
2,825,077	-		PGA1_c27100	0.14	+1.3
2,825,103	+		PGA1_c27100	0.19	-1.1
2,825,143	+		PGA1_c27100	0.28	-0.5
2,825,163	-		PGA1_c27100	0.32	+0.7
2,825,170	-		PGA1_c27100	0.33	-0.9
2,825,170	-		PGA1_c27100	0.33	-1.7
2,825,216	-		PGA1_c27100	0.42	+1.1
2,825,366	+		PGA1_c27100	0.72	+2.0
2,825,401	-		PGA1_c27100	0.79	+0.6
2,825,414	-		PGA1_c27100	0.82	+0.3
2,825,485	-				+1.5
2,825,496	+				+0.1
2,825,537	+				+0.5
2,825,537	+				-0.3
2,825,537	+				+0.7
2,825,537	+				-0.9
2,825,545	-				+0.1
2,825,545	-				+0.5
2,825,545	-				+0.9
2,825,545	-				+0.6
2,825,545	-				-1.0
2,825,545	-				+0.8
2,825,545	-				+2.3
2,825,557	-				-0.6
2,825,659	+				-0.9
2,825,675	-				+0.5
2,825,688	-				+0.5
2,825,704	+				+1.7
2,825,741	+		PGA1_c27110	0.27	-0.9
2,825,763	+		PGA1_c27110	0.40	+0.7
2,825,770	-		PGA1_c27110	0.44	-0.2
2,825,784	+		PGA1_c27110	0.53	+0.1
2,825,813	+		PGA1_c27110	0.70	+1.1
2,825,813	+		PGA1_c27110	0.70	+0.6
2,825,825	-		PGA1_c27110	0.78	+0.9
2,825,838	+		PGA1_c27110	0.85	-0.5
2,825,846	-				+1.4
2,825,846	-				+0.1
2,825,856	-				+0.1
2,825,874	-				+0.1
2,825,880	+				-0.2
2,825,887	+				-1.2
2,825,890	+				+0.7
2,825,907	-				+0.1
2,826,079	+		PGA1_c27120	0.31	+0.9
2,826,080	+		PGA1_c27120	0.31	+0.5
2,826,087	-		PGA1_c27120	0.34	+1.9
2,826,106	+		PGA1_c27120	0.40	+0.5
2,826,106	+		PGA1_c27120	0.40	-0.6
2,826,113	+		PGA1_c27120	0.42	-0.9
2,826,158	+		PGA1_c27120	0.56	-0.7
2,826,158	+		PGA1_c27120	0.56	-1.2
2,826,185	+		PGA1_c27120	0.65	+2.4
2,826,246	-		PGA1_c27120	0.84	-1.2
2,826,288	-				-1.2
2,826,294	+				-1.2
2,826,294	+				-0.9
2,826,318	+				-2.3
2,826,326	-				+0.9
2,826,374	+				+0.8
2,826,374	+				-0.9
2,826,417	-				-0.2
2,826,455	+				+1.7
2,826,463	-				+0.8
2,826,463	-				-0.4
2,826,463	-				+1.1
2,826,463	-				+0.6
2,826,463	-				+1.1
2,826,463	-				+0.8