Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24640

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,570,649	-		PGA1_c24620	0.73	-1.8
2,570,649	-		PGA1_c24620	0.73	+1.1
2,570,766	-		PGA1_c24620	0.84	+0.4
2,570,770	+		PGA1_c24620	0.85	-0.2
2,570,832	-				+0.7
2,570,832	-				-0.5
2,570,832	-				-0.3
2,570,844	+				-0.6
2,570,911	+				-3.0
2,570,930	+				+3.9
2,571,022	+		PGA1_c24630	0.18	+0.2
2,571,049	+		PGA1_c24630	0.23	-0.2
2,571,127	+		PGA1_c24630	0.39	+0.4
2,571,141	-		PGA1_c24630	0.42	-2.1
2,571,194	+		PGA1_c24630	0.52	-1.1
2,571,213	+		PGA1_c24630	0.56	-0.2
2,571,213	+		PGA1_c24630	0.56	-0.5
2,571,268	-		PGA1_c24630	0.67	-0.9
2,571,292	+		PGA1_c24630	0.72	+3.0
2,571,292	+		PGA1_c24630	0.72	+0.5
2,571,310	-		PGA1_c24630	0.76	+1.6
2,571,324	+		PGA1_c24630	0.79	+1.6
2,571,327	-		PGA1_c24630	0.79	+0.5
2,571,332	-		PGA1_c24630	0.80	+0.2
2,571,332	-		PGA1_c24630	0.80	-1.7
2,571,332	-		PGA1_c24630	0.80	+0.8
2,571,332	-		PGA1_c24630	0.80	-0.1
2,571,332	-				+1.1
2,571,369	-		PGA1_c24630	0.88	+1.1
2,571,369	-		PGA1_c24630	0.88	-2.5
2,571,379	-		PGA1_c24630	0.90	+0.1
2,571,379	-		PGA1_c24630	0.90	-0.2
2,571,482	-				+0.6
2,571,566	+				-1.0
2,571,571	+				-0.4
2,571,571	+				-0.3
2,571,571	+				-1.1
2,571,571	+				-1.4
2,571,571	+				+1.8
2,571,571	+				+2.4
2,571,571	+				+0.9
2,571,571	+				-1.5
2,571,579	-				-0.6
2,571,585	+				+1.6
2,571,639	-				-1.2
2,571,639	-				-2.1
2,571,717	-				+0.1
2,571,732	-				-0.5
2,571,739	+				+1.4
2,571,742	-				-0.5
2,571,746	-				-0.6
2,571,768	-		PGA1_c24640	0.11	-0.4
2,571,781	-		PGA1_c24640	0.12	+0.2
2,571,793	-		PGA1_c24640	0.14	-0.1
2,571,838	+		PGA1_c24640	0.18	+1.5
2,571,838	+		PGA1_c24640	0.18	-0.8
2,571,838	+		PGA1_c24640	0.18	+0.3
2,571,838	+		PGA1_c24640	0.18	+2.4
2,571,846	-		PGA1_c24640	0.18	+0.6
2,571,846	-		PGA1_c24640	0.18	-2.1
2,571,846	-		PGA1_c24640	0.18	+2.1
2,571,924	-		PGA1_c24640	0.25	+0.7
2,571,927	+		PGA1_c24640	0.25	+0.6
2,572,021	-		PGA1_c24640	0.34	-0.9
2,572,030	+		PGA1_c24640	0.35	-0.5
2,572,030	+		PGA1_c24640	0.35	-0.6
2,572,030	+		PGA1_c24640	0.35	-0.4
2,572,030	+		PGA1_c24640	0.35	-0.9
2,572,030	+		PGA1_c24640	0.35	+1.1
2,572,030	+		PGA1_c24640	0.35	-1.3
2,572,030	+		PGA1_c24640	0.35	-0.2
2,572,030	+		PGA1_c24640	0.35	+0.8
2,572,030	+		PGA1_c24640	0.35	-2.1
2,572,030	+		PGA1_c24640	0.35	-1.4
2,572,035	+		PGA1_c24640	0.35	-3.2
2,572,035	+		PGA1_c24640	0.35	-0.1
2,572,038	-		PGA1_c24640	0.35	-0.5
2,572,038	-		PGA1_c24640	0.35	-0.1
2,572,038	-		PGA1_c24640	0.35	-0.3
2,572,038	-		PGA1_c24640	0.35	+0.2
2,572,038	-		PGA1_c24640	0.35	-0.9
2,572,127	-		PGA1_c24640	0.43	-0.2
2,572,139	+		PGA1_c24640	0.44	-0.9
2,572,165	-		PGA1_c24640	0.47	-1.3
2,572,387	-		PGA1_c24640	0.66	+2.2
2,572,436	+		PGA1_c24640	0.71	-1.8
2,572,468	+		PGA1_c24640	0.74	-1.5
2,572,507	-		PGA1_c24640	0.77	+0.1
2,572,519	-		PGA1_c24640	0.78	-0.8
2,572,531	+		PGA1_c24640	0.79	-3.1
2,572,540	-		PGA1_c24640	0.80	-1.5
2,572,587	+		PGA1_c24640	0.84	+0.2
2,572,596	+		PGA1_c24640	0.85	-0.9
2,572,606	+		PGA1_c24640	0.86	-0.5
2,572,614	-		PGA1_c24640	0.86	-1.1
2,572,614	-		PGA1_c24640	0.86	+0.2
2,572,614	-		PGA1_c24640	0.86	+1.2
2,572,621	+		PGA1_c24640	0.87	-2.6
2,572,700	+				-0.5
2,572,708	-				-0.9
2,572,708	-				+0.5
2,572,708	-				+1.1
2,572,713	+				-1.4
2,572,713	+				-3.1
2,572,718	-				-0.4
2,572,721	-				-2.5
2,572,768	-				+1.0
2,572,779	+				+0.3
2,572,893	+				-3.1
2,572,893	+				+1.4
2,572,893	+				-0.5
2,572,893	+				+1.1
2,572,901	-				-0.1
2,572,901	-				-0.3
2,572,901	-				-0.5
2,572,901	-				-0.2
2,572,912	+				+0.5
2,573,067	-		PGA1_c24650	0.29	+2.1
2,573,136	-		PGA1_c24650	0.39	-1.8
2,573,172	+		PGA1_c24650	0.44	-1.9
2,573,179	+		PGA1_c24650	0.45	-1.3
2,573,180	-		PGA1_c24650	0.45	-2.6
2,573,180	-		PGA1_c24650	0.45	+0.1
2,573,180	-		PGA1_c24650	0.45	-0.7
2,573,257	-		PGA1_c24650	0.56	+0.5
2,573,279	+		PGA1_c24650	0.59	+0.4
2,573,287	-		PGA1_c24650	0.60	-0.1
2,573,323	+		PGA1_c24650	0.65	-1.4
2,573,404	-		PGA1_c24650	0.77	-0.4
2,573,423	+		PGA1_c24650	0.79	-0.6
2,573,454	+		PGA1_c24650	0.84	+0.1
2,573,454	-		PGA1_c24650	0.84	-1.1
2,573,540	-				+0.1
2,573,574	+				-0.4
2,573,574	+				+0.3
2,573,577	-				-0.4
2,573,582	-				+0.2
2,573,592	-				+1.4
2,573,650	-				-0.1
2,573,650	-				-1.5
2,573,666	-		PGA1_c24660	0.11	+0.7
2,573,692	+		PGA1_c24660	0.16	-0.0
2,573,693	-		PGA1_c24660	0.17	-0.8
2,573,748	+		PGA1_c24660	0.29	-0.5