Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23170

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,401,517	+		PGA1_c23160	0.26	+0.7
2,401,553	+		PGA1_c23160	0.29	+1.2
2,401,561	-		PGA1_c23160	0.30	+1.4
2,401,561	-		PGA1_c23160	0.30	+1.4
2,401,566	-		PGA1_c23160	0.30	-1.8
2,401,622	-		PGA1_c23160	0.34	+0.0
2,401,682	+		PGA1_c23160	0.39	-0.3
2,401,743	-		PGA1_c23160	0.44	+1.3
2,401,746	-		PGA1_c23160	0.44	-0.1
2,401,751	-		PGA1_c23160	0.44	-0.8
2,401,848	+		PGA1_c23160	0.52	+0.0
2,401,874	-		PGA1_c23160	0.54	+0.3
2,401,890	-		PGA1_c23160	0.55	+0.1
2,401,914	+		PGA1_c23160	0.57	-0.2
2,401,949	+		PGA1_c23160	0.60	+0.5
2,401,981	+		PGA1_c23160	0.62	+0.0
2,401,981	+		PGA1_c23160	0.62	-0.3
2,401,981	+		PGA1_c23160	0.62	+0.9
2,401,981	+		PGA1_c23160	0.62	-1.2
2,401,981	+		PGA1_c23160	0.62	+2.1
2,401,989	-		PGA1_c23160	0.63	-1.0
2,401,989	-		PGA1_c23160	0.63	-0.5
2,401,989	-		PGA1_c23160	0.63	-0.9
2,401,989	-		PGA1_c23160	0.63	+0.5
2,401,989	-		PGA1_c23160	0.63	-1.0
2,402,055	-		PGA1_c23160	0.68	+1.2
2,402,087	+		PGA1_c23160	0.70	+0.4
2,402,087	+		PGA1_c23160	0.70	-0.4
2,402,211	+		PGA1_c23160	0.80	-2.1
2,402,219	-		PGA1_c23160	0.81	-2.6
2,402,270	-		PGA1_c23160	0.84	-0.1
2,402,457	+				+0.1
2,402,478	-				+1.3
2,402,490	-				+0.2
2,402,500	+				+0.2
2,402,505	+				-1.8
2,402,513	+				-1.3
2,402,513	-				-1.0
2,402,537	+				+0.2
2,402,561	+				-1.1
2,402,646	-		PGA1_c23170	0.11	-0.8
2,402,733	+		PGA1_c23170	0.17	-0.1
2,402,765	-		PGA1_c23170	0.20	-1.8
2,402,775	+		PGA1_c23170	0.20	-0.0
2,402,876	+		PGA1_c23170	0.27	-1.1
2,402,884	-		PGA1_c23170	0.28	+0.1
2,402,886	+		PGA1_c23170	0.28	-0.8
2,402,886	+		PGA1_c23170	0.28	-0.7
2,402,900	+		PGA1_c23170	0.29	+1.2
2,402,900	+		PGA1_c23170	0.29	+0.6
2,402,930	+		PGA1_c23170	0.31	-0.4
2,402,943	-		PGA1_c23170	0.32	-0.2
2,403,013	+		PGA1_c23170	0.37	+2.0
2,403,021	-		PGA1_c23170	0.38	-0.2
2,403,149	+		PGA1_c23170	0.47	-0.1
2,403,149	+		PGA1_c23170	0.47	-0.1
2,403,159	+		PGA1_c23170	0.47	+0.0
2,403,258	-		PGA1_c23170	0.54	-0.4
2,403,295	-		PGA1_c23170	0.57	+2.5
2,403,311	+		PGA1_c23170	0.58	+1.9
2,403,319	-		PGA1_c23170	0.59	+0.8
2,403,329	-		PGA1_c23170	0.59	-0.6
2,403,329	-		PGA1_c23170	0.59	-2.4
2,403,384	+		PGA1_c23170	0.63	-0.4
2,403,390	-		PGA1_c23170	0.64	-2.0
2,403,390	-		PGA1_c23170	0.64	+1.0
2,403,404	+		PGA1_c23170	0.64	+0.2
2,403,412	-		PGA1_c23170	0.65	+1.0
2,403,422	+		PGA1_c23170	0.66	+0.4
2,403,456	-		PGA1_c23170	0.68	+2.3
2,403,456	-		PGA1_c23170	0.68	-1.9
2,403,504	+		PGA1_c23170	0.72	+0.4
2,403,527	-		PGA1_c23170	0.73	+0.4
2,403,572	-		PGA1_c23170	0.76	+0.0
2,403,587	+		PGA1_c23170	0.77	+0.0
2,403,655	+		PGA1_c23170	0.82	-0.3
2,403,699	-		PGA1_c23170	0.85	+0.4
2,403,706	+		PGA1_c23170	0.86	+0.7
2,403,752	-		PGA1_c23170	0.89	+0.3
2,403,775	+				+0.2
2,403,775	+				+1.0
2,403,778	-				-2.4
2,403,845	-				+0.0
2,403,856	+				-2.9
2,403,856	+				-0.1
2,403,864	-				-0.0
2,403,891	-				+0.9
2,403,905	+				-1.6
2,403,917	+				+0.9
2,403,941	+				-2.1
2,403,949	-				+0.4
2,403,998	+				+0.8
2,404,186	+		PGA1_c23180	0.30	+0.3
2,404,194	-		PGA1_c23180	0.31	+2.3
2,404,203	+		PGA1_c23180	0.32	-1.9
2,404,231	+		PGA1_c23180	0.35	-1.2
2,404,261	-		PGA1_c23180	0.39	+1.2
2,404,266	+		PGA1_c23180	0.39	+1.0
2,404,274	-		PGA1_c23180	0.40	-1.0
2,404,274	-		PGA1_c23180	0.40	-1.0
2,404,333	+		PGA1_c23180	0.47	+0.6
2,404,333	+		PGA1_c23180	0.47	-0.6
2,404,341	-		PGA1_c23180	0.48	+1.0
2,404,357	+		PGA1_c23180	0.50	-0.2
2,404,373	-		PGA1_c23180	0.52	-3.2
2,404,401	-		PGA1_c23180	0.55	+0.3
2,404,419	+		PGA1_c23180	0.57	+0.4
2,404,427	-		PGA1_c23180	0.58	-0.1
2,404,427	-		PGA1_c23180	0.58	+0.5
2,404,561	+		PGA1_c23180	0.73	+1.3
2,404,604	-		PGA1_c23180	0.78	-0.3
2,404,697	+		PGA1_c23180	0.88	-0.4
2,404,801	-				+0.5
2,404,857	+				+1.1
2,404,863	+				-0.8
2,404,906	+				+0.6