Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21670

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,244,876	+		PGA1_c21660	0.57	+0.2
2,244,889	-		PGA1_c21660	0.58	-1.0
2,244,998	+		PGA1_c21660	0.64	+2.6
2,245,003	+		PGA1_c21660	0.65	+0.9
2,245,003	+		PGA1_c21660	0.65	-1.6
2,245,003	+		PGA1_c21660	0.65	+0.8
2,245,011	-		PGA1_c21660	0.65	+0.7
2,245,011	-		PGA1_c21660	0.65	+1.0
2,245,018	-		PGA1_c21660	0.66	-0.1
2,245,051	-		PGA1_c21660	0.68	-0.6
2,245,053	-		PGA1_c21660	0.68	+0.2
2,245,066	-		PGA1_c21660	0.68	-1.2
2,245,113	-		PGA1_c21660	0.71	-3.1
2,245,152	-		PGA1_c21660	0.74	-0.8
2,245,190	+		PGA1_c21660	0.76	-0.8
2,245,252	-		PGA1_c21660	0.80	+0.4
2,245,376	-		PGA1_c21660	0.87	+1.2
2,245,376	-		PGA1_c21660	0.87	-0.5
2,245,376	-		PGA1_c21660	0.87	+0.9
2,245,461	+				+0.4
2,245,529	+				+1.1
2,245,529	+				-0.4
2,245,615	+				-0.8
2,245,615	+				-0.6
2,245,616	+				-0.5
2,245,616	+				-0.9
2,245,616	+				+2.0
2,245,623	-				-0.3
2,245,624	-				-0.5
2,245,626	+				-0.8
2,245,634	-				+1.8
2,245,846	-				-0.7
2,245,893	-				-0.7
2,245,893	-				+0.2
2,246,061	-		PGA1_c21670	0.18	-2.0
2,246,203	+		PGA1_c21670	0.28	-1.1
2,246,211	-		PGA1_c21670	0.28	-1.0
2,246,216	+		PGA1_c21670	0.29	-1.3
2,246,232	+		PGA1_c21670	0.30	-2.3
2,246,247	+		PGA1_c21670	0.31	-2.8
2,246,270	-		PGA1_c21670	0.32	-1.0
2,246,278	-		PGA1_c21670	0.33	-0.4
2,246,288	-		PGA1_c21670	0.34	+0.5
2,246,374	+		PGA1_c21670	0.40	-1.7
2,246,404	+		PGA1_c21670	0.42	-1.0
2,246,404	+		PGA1_c21670	0.42	-2.0
2,246,407	-		PGA1_c21670	0.42	-1.6
2,246,417	-		PGA1_c21670	0.42	+0.0
2,246,417	-		PGA1_c21670	0.42	-1.8
2,246,463	-		PGA1_c21670	0.46	-2.1
2,246,502	+		PGA1_c21670	0.48	-0.1
2,246,608	-		PGA1_c21670	0.56	-1.6
2,246,622	+		PGA1_c21670	0.57	+0.8
2,246,640	-		PGA1_c21670	0.58	+0.3
2,246,704	+		PGA1_c21670	0.62	-2.0
2,246,722	-		PGA1_c21670	0.63	+1.3
2,246,749	+		PGA1_c21670	0.65	+0.4
2,246,792	-		PGA1_c21670	0.68	+0.3
2,246,802	+		PGA1_c21670	0.69	-1.0
2,247,036	+		PGA1_c21670	0.85	+1.3
2,247,076	+		PGA1_c21670	0.88	+0.7
2,247,172	-				-1.7
2,247,185	-				-0.9
2,247,230	+				+0.7
2,247,230	+				-0.7
2,247,230	+				-0.6
2,247,230	+				-1.1
2,247,230	+				-0.2
2,247,230	+				-0.2
2,247,230	+				-0.3
2,247,230	+				-0.6
2,247,230	+				-1.2
2,247,230	+				+0.1
2,247,230	+				-1.2
2,247,230	+				+1.0
2,247,230	+				+0.3
2,247,230	+				-1.3
2,247,230	+				+1.6
2,247,230	+				-0.3
2,247,230	+				-1.1
2,247,230	+				-0.5
2,247,230	+				-1.0
2,247,230	+				+0.2
2,247,230	+				+0.0
2,247,230	+				-2.2
2,247,238	-				-0.3
2,247,238	-				-1.3
2,247,238	-				+0.3
2,247,238	-				+0.4
2,247,238	-				-0.1
2,247,238	-				-1.4
2,247,238	-				+0.7
2,247,238	-				-0.1
2,247,238	-				-1.0
2,247,238	-				-3.0
2,247,238	-				+0.3
2,247,240	+				-1.4
2,247,240	+				+1.6
2,247,299	+				+1.0
2,247,307	-				+0.7
2,247,315	-				+2.3
2,247,315	-				+0.2
2,247,315	-				+1.3
2,247,315	-				+1.5
2,247,315	-				+1.0
2,247,317	-				-0.3
2,247,317	-				+0.3
2,247,317	-				-0.1
2,247,361	-				+0.6
2,247,363	+				+0.8
2,247,418	-				+0.0
2,247,428	+				-2.2
2,247,443	+				+1.4
2,247,444	+				+1.3
2,247,497	-		PGA1_c21680	0.11	+0.3
2,247,499	-		PGA1_c21680	0.12	-1.6
2,247,507	+		PGA1_c21680	0.12	-0.9
2,247,523	+		PGA1_c21680	0.13	-0.5
2,247,531	-		PGA1_c21680	0.14	-0.7
2,247,532	-		PGA1_c21680	0.14	+0.7
2,247,543	+		PGA1_c21680	0.15	-1.3
2,247,551	-		PGA1_c21680	0.15	-0.5
2,247,673	-		PGA1_c21680	0.23	-0.1
2,247,758	+		PGA1_c21680	0.29	+0.6
2,247,770	-		PGA1_c21680	0.30	+0.3
2,247,780	-		PGA1_c21680	0.30	+1.2
2,247,826	-		PGA1_c21680	0.33	+2.6
2,247,911	-		PGA1_c21680	0.39	-1.1
2,248,020	-		PGA1_c21680	0.46	-0.9
2,248,021	-		PGA1_c21680	0.46	-1.1
2,248,091	+		PGA1_c21680	0.51	-0.3
2,248,101	+		PGA1_c21680	0.51	+1.4
2,248,108	-		PGA1_c21680	0.52	+0.1
2,248,143	-		PGA1_c21680	0.54	-1.5
2,248,159	+		PGA1_c21680	0.55	+0.4
2,248,159	+		PGA1_c21680	0.55	+1.7
2,248,167	-		PGA1_c21680	0.56	+2.0
2,248,232	+		PGA1_c21680	0.60	+0.7
2,248,234	+		PGA1_c21680	0.60	+2.9
2,248,237	-		PGA1_c21680	0.61	+0.8
2,248,247	-		PGA1_c21680	0.61	+2.0
2,248,253	+		PGA1_c21680	0.62	-0.3