Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21210

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,195,418	-		PGA1_c21200	0.46	+1.4
2,195,480	-		PGA1_c21200	0.50	+2.0
2,195,504	+		PGA1_c21200	0.52	-0.6
2,195,512	+		PGA1_c21200	0.53	-0.6
2,195,517	+		PGA1_c21200	0.53	+1.4
2,195,561	+		PGA1_c21200	0.56	-0.4
2,195,568	-		PGA1_c21200	0.57	+1.0
2,195,669	-		PGA1_c21200	0.64	+1.6
2,195,699	-		PGA1_c21200	0.66	+1.0
2,195,761	-		PGA1_c21200	0.70	-0.3
2,195,783	-		PGA1_c21200	0.72	+1.0
2,195,788	-		PGA1_c21200	0.72	+0.6
2,195,873	+		PGA1_c21200	0.78	-0.0
2,195,881	-		PGA1_c21200	0.79	+0.2
2,195,881	-		PGA1_c21200	0.79	+2.0
2,195,920	+		PGA1_c21200	0.81	-0.0
2,195,947	+		PGA1_c21200	0.83	-0.0
2,195,955	-		PGA1_c21200	0.84	+1.0
2,195,955	-		PGA1_c21200	0.84	-0.0
2,195,956	-		PGA1_c21200	0.84	-1.3
2,195,956	-		PGA1_c21200	0.84	+0.8
2,195,958	+		PGA1_c21200	0.84	-2.2
2,195,999	+		PGA1_c21200	0.87	-0.0
2,195,999	+		PGA1_c21200	0.87	+0.4
2,195,999	+		PGA1_c21200	0.87	+1.0
2,195,999	+		PGA1_c21200	0.87	-1.0
2,196,007	-		PGA1_c21200	0.87	+1.6
2,196,046	-				+1.6
2,196,056	+				+0.2
2,196,087	-				+0.6
2,196,161	+				-1.0
2,196,220	+				-1.6
2,196,229	-				-0.6
2,196,257	-				-1.3
2,196,258	-				-1.0
2,196,280	+				-0.6
2,196,281	+				-2.0
2,196,281	+				-1.8
2,196,281	+				-1.3
2,196,289	-				-1.6
2,196,289	-				-2.0
2,196,289	-				-2.2
2,196,302	-				-0.0
2,196,418	-		PGA1_c21210	0.24	+1.0
2,196,450	-		PGA1_c21210	0.31	-1.3
2,196,482	-		PGA1_c21210	0.38	-0.6
2,196,517	+		PGA1_c21210	0.47	-2.0
2,196,555	+		PGA1_c21210	0.55	-2.0
2,196,602	-		PGA1_c21210	0.66	-0.6
2,196,702	+		PGA1_c21210	0.90	-3.0
2,196,710	+				-3.0
2,196,710	+				-1.6
2,196,755	-				-0.6
2,196,764	-				-0.0
2,196,792	-				-0.0
2,196,792	-				-0.0
2,196,840	+				-0.2
2,196,849	+				+0.4
2,196,857	-				-0.5
2,196,857	-				+0.5
2,196,862	+				+1.3
2,196,864	+				-0.3
2,196,870	-				+3.6
2,196,993	+				-0.0
2,197,001	-				-0.6
2,197,083	+				+0.3
2,197,147	+				+2.0
2,197,295	+				-1.3
2,197,338	-		PGA1_c21220	0.12	-0.8
2,197,520	+		PGA1_c21220	0.49	+1.0
2,197,709	+		PGA1_c21220	0.86	-0.6