Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21070

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,182,435	-		PGA1_c21040	0.78	-0.2
2,182,443	-		PGA1_c21040	0.80	-0.0
2,182,465	+		PGA1_c21040	0.86	+0.1
2,182,499	+				+0.4
2,182,522	+				-1.9
2,182,530	-				+0.4
2,182,530	-				+1.0
2,182,655	+		PGA1_c21050	0.31	+2.0
2,182,655	+		PGA1_c21050	0.31	+1.0
2,182,663	-		PGA1_c21050	0.34	-0.3
2,182,663	-		PGA1_c21050	0.34	+2.0
2,182,663	-		PGA1_c21050	0.34	+1.7
2,182,663	-		PGA1_c21050	0.34	-0.6
2,182,695	+		PGA1_c21050	0.44	+2.0
2,182,731	-		PGA1_c21050	0.55	-0.4
2,182,737	-		PGA1_c21050	0.57	-1.3
2,182,784	-		PGA1_c21050	0.71	-0.6
2,182,804	-		PGA1_c21050	0.78	+0.6
2,182,806	+		PGA1_c21050	0.78	-0.0
2,182,854	+				+0.2
2,182,908	-				+1.0
2,183,032	+				+0.7
2,183,032	+				-0.0
2,183,040	-				-2.0
2,183,057	+				+1.0
2,183,067	+				-0.6
2,183,135	+		PGA1_c21060	0.19	-1.3
2,183,143	-		PGA1_c21060	0.23	+2.6
2,183,161	-		PGA1_c21060	0.31	+1.0
2,183,170	+		PGA1_c21060	0.36	+1.0
2,183,170	+		PGA1_c21060	0.36	+2.6
2,183,187	+		PGA1_c21060	0.44	+0.3
2,183,202	+		PGA1_c21060	0.51	+0.4
2,183,207	+		PGA1_c21060	0.54	-1.0
2,183,207	+		PGA1_c21060	0.54	+0.7
2,183,215	-		PGA1_c21060	0.57	+0.2
2,183,324	-				+0.6
2,183,425	-				+1.6
2,183,425	-				+0.6
2,183,455	+				-0.6
2,183,455	+				+2.4
2,183,463	-				-0.6
2,183,463	-				-0.0
2,183,463	-				+0.6
2,183,472	+				-0.4
2,183,472	+				-1.2
2,183,472	+				+2.3
2,183,514	-				-0.0
2,183,524	-				-1.6
2,183,568	-		PGA1_c21070	0.11	+0.6
2,183,589	+		PGA1_c21070	0.13	+1.0
2,183,656	-		PGA1_c21070	0.17	+2.0
2,183,719	-		PGA1_c21070	0.22	-0.0
2,183,764	-		PGA1_c21070	0.25	-0.2
2,183,764	-		PGA1_c21070	0.25	+2.6
2,183,764	-		PGA1_c21070	0.25	-0.6
2,183,764	-		PGA1_c21070	0.25	+1.0
2,183,764	-		PGA1_c21070	0.25	+2.0
2,183,764	-		PGA1_c21070	0.25	+0.4
2,183,839	+		PGA1_c21070	0.30	-1.6
2,183,893	-		PGA1_c21070	0.34	+0.2
2,183,898	-		PGA1_c21070	0.34	-0.3
2,183,924	-		PGA1_c21070	0.36	+1.6
2,183,929	-		PGA1_c21070	0.36	-0.0
2,183,980	+		PGA1_c21070	0.40	-2.0
2,184,005	+		PGA1_c21070	0.41	-2.2
2,184,005	+		PGA1_c21070	0.41	-0.3
2,184,013	-		PGA1_c21070	0.42	-1.3
2,184,019	+		PGA1_c21070	0.42	-0.2
2,184,024	+		PGA1_c21070	0.43	+1.0
2,184,027	-		PGA1_c21070	0.43	+0.7
2,184,032	-		PGA1_c21070	0.43	-1.8
2,184,032	-		PGA1_c21070	0.43	+0.4
2,184,032	-		PGA1_c21070	0.43	+0.4
2,184,032	-		PGA1_c21070	0.43	+2.6
2,184,037	-		PGA1_c21070	0.43	+1.2
2,184,162	-		PGA1_c21070	0.52	-1.6
2,184,172	-		PGA1_c21070	0.53	-0.2
2,184,172	-		PGA1_c21070	0.53	+2.0
2,184,265	+		PGA1_c21070	0.59	+0.4
2,184,351	+		PGA1_c21070	0.65	-0.0
2,184,369	-		PGA1_c21070	0.66	+2.0
2,184,505	+		PGA1_c21070	0.75	+0.2
2,184,505	+		PGA1_c21070	0.75	+0.7
2,184,513	-		PGA1_c21070	0.76	-0.0
2,184,557	-		PGA1_c21070	0.79	+0.6
2,184,629	-		PGA1_c21070	0.84	+2.0
2,184,775	+				+2.6
2,184,775	+				+0.5
2,184,782	+				-2.2
2,184,934	+				+0.3
2,184,996	+		PGA1_c21080	0.11	+1.6
2,185,115	+		PGA1_c21080	0.23	-0.6
2,185,115	+		PGA1_c21080	0.23	+0.4
2,185,215	+		PGA1_c21080	0.32	+0.7
2,185,215	+		PGA1_c21080	0.32	-0.0
2,185,223	-		PGA1_c21080	0.33	-1.3
2,185,255	+		PGA1_c21080	0.36	+0.4
2,185,309	+		PGA1_c21080	0.42	-1.0
2,185,309	+		PGA1_c21080	0.42	-1.2
2,185,325	-		PGA1_c21080	0.43	+3.8
2,185,344	+		PGA1_c21080	0.45	+2.0
2,185,430	+		PGA1_c21080	0.53	-0.6
2,185,432	+		PGA1_c21080	0.53	+1.2
2,185,468	+		PGA1_c21080	0.57	-2.3
2,185,479	-		PGA1_c21080	0.58	+0.2
2,185,553	+		PGA1_c21080	0.65	-2.3
2,185,693	-		PGA1_c21080	0.79	-0.2
2,185,703	-		PGA1_c21080	0.79	+1.0
2,185,703	-		PGA1_c21080	0.79	+0.6
2,185,786	+		PGA1_c21080	0.87	-0.9
2,185,798	-		PGA1_c21080	0.89	+0.2
2,185,832	-				+0.6
2,185,856	-				+0.4