Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19990

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,072,291	+		PGA1_c19970	0.62	+1.0
2,072,309	+		PGA1_c19970	0.64	+3.0
2,072,408	-		PGA1_c19970	0.74	-1.0
2,072,583	-				+3.0
2,072,598	+				-0.0
2,072,598	+				+2.0
2,072,619	+				+1.0
2,072,624	+				+1.0
2,072,624	+				-0.0
2,072,627	-				+1.8
2,072,632	-				+1.0
2,072,632	-				+1.4
2,072,692	-				+1.0
2,072,699	-				+1.2
2,072,737	+		PGA1_c19980	0.11	+2.3
2,072,737	+		PGA1_c19980	0.11	-0.9
2,072,745	-		PGA1_c19980	0.12	+0.1
2,072,745	-		PGA1_c19980	0.12	-0.4
2,072,784	+		PGA1_c19980	0.20	-1.0
2,072,812	-		PGA1_c19980	0.25	-2.2
2,072,981	-		PGA1_c19980	0.56	+1.5
2,072,986	+		PGA1_c19980	0.57	+1.0
2,073,038	-		PGA1_c19980	0.66	-1.0
2,073,064	-		PGA1_c19980	0.71	-0.0
2,073,243	-				+2.0
2,073,248	-				+0.5
2,073,329	-				+1.0
2,073,463	+		PGA1_c19990	0.18	+1.0
2,073,517	+		PGA1_c19990	0.23	-0.0
2,073,525	-		PGA1_c19990	0.23	+1.0
2,073,577	-		PGA1_c19990	0.28	+1.0
2,073,586	+		PGA1_c19990	0.28	+1.0
2,073,594	-		PGA1_c19990	0.29	+0.5
2,073,594	-		PGA1_c19990	0.29	-0.6
2,073,732	-		PGA1_c19990	0.40	-0.0
2,073,760	+		PGA1_c19990	0.43	-0.0
2,073,802	-		PGA1_c19990	0.46	-1.4
2,073,913	+		PGA1_c19990	0.55	+1.0
2,073,918	+		PGA1_c19990	0.56	-0.6
2,073,937	+		PGA1_c19990	0.57	+1.5
2,073,945	-		PGA1_c19990	0.58	+1.5
2,073,985	-		PGA1_c19990	0.61	-0.0
2,074,001	-		PGA1_c19990	0.62	-1.0
2,074,010	+		PGA1_c19990	0.63	+1.0
2,074,044	+		PGA1_c19990	0.66	-0.0
2,074,044	+		PGA1_c19990	0.66	+2.5
2,074,044	+		PGA1_c19990	0.66	+1.0
2,074,049	+		PGA1_c19990	0.66	+1.7
2,074,052	-		PGA1_c19990	0.67	+1.0
2,074,062	-		PGA1_c19990	0.67	+0.4
2,074,123	+		PGA1_c19990	0.73	+0.5
2,074,140	+		PGA1_c19990	0.74	+2.0
2,074,148	-		PGA1_c19990	0.75	-0.0
2,074,172	+		PGA1_c19990	0.77	+2.0
2,074,185	-		PGA1_c19990	0.78	+2.0
2,074,196	-		PGA1_c19990	0.79	-0.0
2,074,301	-		PGA1_c19990	0.87	+0.4
2,074,359	+				+1.0
2,074,364	+				+1.0
2,074,367	-				+0.2
2,074,374	-				+1.5
2,074,402	-				-0.0
2,074,442	+				+2.0
2,074,457	-				-0.0
2,074,476	+				-0.6
2,074,476	+				+1.0
2,074,484	-				+2.5
2,074,484	-				+0.2
2,074,508	+				-0.0
2,074,697	+				+1.0
2,074,732	+		PGA1_c20000	0.53	+0.1
2,074,767	+		PGA1_c20000	0.65	-0.0
2,074,840	-				+1.0
2,074,878	+				+1.7
2,075,004	+				+2.5
2,075,004	+				+2.5
2,075,004	+				+1.0
2,075,004	+				+2.2
2,075,004	+				-0.4
2,075,006	+				-0.6
2,075,012	-				+1.0
2,075,012	-				-0.0
2,075,014	-				-1.4
2,075,021	+				+2.0
2,075,041	-				+2.5
2,075,063	+				+0.2
2,075,068	+				-0.6
2,075,073	+				+1.0
2,075,073	+				-1.9
2,075,076	-				+1.0
2,075,076	-				+1.0
2,075,120	+				-2.2
2,075,137	+				+1.0
2,075,137	+				+0.5
2,075,137	+				+0.1
2,075,137	+				+0.5
2,075,137	+				+1.5
2,075,145	-		PGA1_c20010	0.10	+1.0
2,075,145	-		PGA1_c20010	0.10	+2.3
2,075,145	-		PGA1_c20010	0.10	+3.0
2,075,145	-		PGA1_c20010	0.10	+1.0
2,075,145	-		PGA1_c20010	0.10	+1.0
2,075,150	+		PGA1_c20010	0.10	+1.7
2,075,191	-		PGA1_c20010	0.12	+3.0
2,075,249	-		PGA1_c20010	0.14	-0.0
2,075,260	+		PGA1_c20010	0.14	+1.5
2,075,268	-		PGA1_c20010	0.15	+0.4
2,075,310	+		PGA1_c20010	0.16	-1.0
2,075,318	-		PGA1_c20010	0.16	+1.7
2,075,318	-		PGA1_c20010	0.16	+0.1
2,075,337	-		PGA1_c20010	0.17	+2.5
2,075,354	+		PGA1_c20010	0.18	+2.3
2,075,354	+		PGA1_c20010	0.18	-1.0
2,075,430	-		PGA1_c20010	0.20	+1.0
2,075,438	+		PGA1_c20010	0.21	-1.4